RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 TMEM30AQ9NV96 361 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 SLC38A7Q9NVC3 462 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 ARMC1Q9NVT9 282 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 NLE1Q9NVX2 485 aaPredicted RBP1.87□□□□□ -2.11
PTPN12-212ENST00000494248 CLN6Q9NWW5 311 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 DUS2Q9NX74 493 aaKnown RBP1.87□□□□□ -2.11
PTPN12-212ENST00000494248 TEX10Q9NXF1 929 aaPredicted RBP1.87□□□□□ -2.11
PTPN12-212ENST00000494248 GALPQ9UBC7 116 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 FBXL4Q9UKA2 621 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 PILRBQ9UKJ0 227 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 RAB26Q9ULW5 256 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 MGAT4AQ9UM21 535 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 UBQLN1Q9UMX0 589 aaKnown RBP1.87□□□□□ -2.11
PTPN12-212ENST00000494248 AMDHD2Q9Y303 409 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 GMPPBQ9Y5P6 360 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 MTCH2Q9Y6C9 303 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 SYNJ2O15056 1496 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 WDR7Q9Y4E6 1490 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 ABCB11O95342 1321 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 PBRM1Q86U86 1689 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 NUP155O75694 1391 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 ZFYVE9O95405 1425 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 NUP160Q12769 1436 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 GLYATL1P3A0A0U1RQE8 302 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 ANKRD20A5PA0PJZ0 165 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 TSPAN11A1L157 253 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 LRIT2A6NDA9 550 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 ZNF233A6NK53 670 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 RNF212BA8MTL3 300 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 KRTAP16-1A8MUX0 517 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 SEC14L6B5MCN3 397 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 TMEM178BH3BS89 294 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 K7EN84 100 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 M0QZK8 103 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 BET1O15155 118 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 TM9SF1O15321 606 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 INPP4BO15327 924 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 RGS16O15492 202 aaPredicted RBP1.86□□□□□ -2.11
PTPN12-212ENST00000494248 FGF16O43320 207 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 EFNA2O43921 213 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 KIAA0513O60268 411 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 TOM1O60784 492 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 ALOX12BO75342 701 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 MPDU1O75352 247 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 KHDRBS3O75525 346 aaKnown RBP1.86□□□□□ -2.11
PTPN12-212ENST00000494248 TRAPPC6AO75865 159 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 WISP2O76076 250 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 MPZL1O95297 269 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 C1orf105O95561 183 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 RAB36O95755 333 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 IFNA16P05015 189 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 ISG15P05161 165 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 CRHP06850 196 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 NBEAP1P0C6P0 100 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 ACP2P11117 423 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 SLC2A1P11166 492 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 GFAPP14136 432 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 ABOP16442 354 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 MGMTP16455 207 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 CELP19835 753 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 LOXP28300 417 aaPredicted RBP1.86□□□□□ -2.11
PTPN12-212ENST00000494248 SSTR5P35346 364 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 RPL4P36578 427 aaKnown RBP1.86□□□□□ -2.11
PTPN12-212ENST00000494248 DDOSTP39656 456 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 LEPP41159 167 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 ACOT2P49753 483 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 EMDP50402 254 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 HLCSP50747 726 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 PRKXP51817 358 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 CRISP1P54107 249 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 SEC61BP60468 96 aaKnown RBP1.86□□□□□ -2.11
PTPN12-212ENST00000494248 AP1S1P61966 158 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 RANP62826 216 aaKnown RBP1.86□□□□□ -2.11
PTPN12-212ENST00000494248 SLC35B1P78383 322 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 RPL19P84098 196 aaKnown RBP1.86□□□□□ -2.11
PTPN12-212ENST00000494248 FAM3AP98173 230 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 FLI1Q01543 452 aaPredicted RBP1.86□□□□□ -2.11
PTPN12-212ENST00000494248 TLE4Q04727 773 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 RGS1Q08116 209 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 FCHO2Q0JRZ9 810 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 ELAVL2Q12926 359 aaKnown RBP1.86□□□□□ -2.11
PTPN12-212ENST00000494248 TAF10Q12962 218 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 IL18R1Q13478 541 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 ASAH1Q13510 395 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 GTF2H2Q13888 395 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 GNMTQ14749 295 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 TAF1AQ15573 450 aaPredicted RBP1.86□□□□□ -2.11
PTPN12-212ENST00000494248 TAL2Q16559 108 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 NDUFA9Q16795 377 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 DUOXA1Q1HG43 343 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 TRMT5Q32P41 509 aaKnown RBP1.86□□□□□ -2.11
PTPN12-212ENST00000494248 PHLDA2Q53GA4 152 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 ACTL10Q5JWF8 245 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 C1orf146Q5VVC0 180 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 SPINK14Q6IE38 97 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 FAM45BPQ6NSW5 357 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 GTF2H2CQ6P1K8 395 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 FAHD2BQ6P2I3 314 aaPredicted RBP1.86□□□□□ -2.11
PTPN12-212ENST00000494248 PNCKQ6P2M8 343 aa1.86□□□□□ -2.11
PTPN12-212ENST00000494248 SLC25A47Q6Q0C1 308 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms