RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 MRPL15Q9P015 296 aaKnown RBP8.65□□□□□ -1.02
NPHP3-209ENST00000493732 MYOTQ9UBF9 498 aa8.65□□□□□ -1.02
NPHP3-209ENST00000493732 ING1Q9UK53 422 aaPredicted RBP8.65□□□□□ -1.02
NPHP3-209ENST00000493732 OR52A1Q9UKL2 312 aa8.65□□□□□ -1.02
NPHP3-209ENST00000493732 SIT1Q9Y3P8 196 aa8.65□□□□□ -1.02
NPHP3-209ENST00000493732 EML5Q05BV3 1969 aa8.65□□□□□ -1.03
NPHP3-209ENST00000493732 TRAV18A0A075B6X5 111 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 IGHV3-20A0A0C4DH32 117 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 TMEM269A0A1B0GVZ9 245 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 A0A1W2PPC1 479 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 A0A1W2PQ72 361 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 METTL21EPA6NDL7 271 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 TP53I11O14683 189 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 NOS1APO75052 506 aaPredicted RBP8.64□□□□□ -1.03
NPHP3-209ENST00000493732 SRSF10O75494 262 aaKnown RBP8.64□□□□□ -1.03
NPHP3-209ENST00000493732 GPANK1O95872 356 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 PNPP00491 289 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 MELTFP08582 738 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 ITGA5P08648 1049 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 GABRA1P14867 456 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 RAB6AP20340 208 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 ADH6P28332 368 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 PER3P56645 1201 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 TAS2R19P59542 299 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 SNRPD2P62316 118 aaKnown RBP8.64□□□□□ -1.03
NPHP3-209ENST00000493732 POU3F1Q03052 451 aaPredicted RBP8.64□□□□□ -1.03
NPHP3-209ENST00000493732 MELKQ14680 651 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 ODF4Q2M2E3 257 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 LINC00303Q3SY05 128 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 C3orf33Q6P1S2 294 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 TEX261Q6UWH6 196 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 SEZ6L2Q6UXD5 910 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 ZNF574Q6ZN55 896 aaPredicted RBP8.64□□□□□ -1.03
NPHP3-209ENST00000493732 SHISA6Q6ZSJ9 500 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 DCXRQ7Z4W1 244 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 ADGRE4PQ86SQ3 457 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 UBALD2Q8IYN6 164 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 BEST4Q8NFU0 473 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 OR13C3Q8NGS6 347 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 OR2T35Q8NGX2 323 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 OR6N1Q8NGY5 312 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 ST7LQ8TDW4 575 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 CCDC107Q8WV48 283 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 RNF133Q8WVZ7 376 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 SORCS2Q96PQ0 1159 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 CRB3Q9BUF7 120 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 ALX4Q9H161 411 aaPredicted RBP8.64□□□□□ -1.03
NPHP3-209ENST00000493732 ATG5Q9H1Y0 275 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 METTL7AQ9H8H3 244 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 MOB1AQ9H8S9 216 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 WDR54Q9H977 334 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 MED11Q9P086 117 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 ELF5Q9UKW6 265 aaPredicted RBP8.64□□□□□ -1.03
NPHP3-209ENST00000493732 SLC22A13Q9Y226 551 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 WIF1Q9Y5W5 379 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 U3KQ87 197 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 RP1P56715 2156 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 UNC13CQ8NB66 2214 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 IGHV5-10-1A0A0J9YXX1 117 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 LOC390937A0A1W2PQ73 354 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 CIB4A0PJX0 185 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 RGS11O94810 467 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 HPXP02790 462 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 ALDOBP05062 364 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 LPLP06858 475 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 ERCC1P07992 297 aaPredicted RBP8.64□□□□□ -1.03
NPHP3-209ENST00000493732 FBXO45P0C2W1 286 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 PSMA6P60900 246 aaKnown RBP8.64□□□□□ -1.03
NPHP3-209ENST00000493732 FOXF1Q12946 379 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 SNTA1Q13424 505 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 IL11RAQ14626 422 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 FAM189A2Q15884 450 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 ETFDHQ16134 617 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 C1orf100Q5SVJ3 147 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 LRFN4Q6PJG9 635 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 KANSL1Q7Z3B3 1105 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.64□□□□□ -1.03
NPHP3-209ENST00000493732 UEVLDQ8IX04 471 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 ARL5BQ96KC2 179 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 SLC25A21Q9BQT8 299 aaPredicted RBP8.64□□□□□ -1.03
NPHP3-209ENST00000493732 TMPRSS13Q9BYE2 586 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 DEFB126Q9BYW3 111 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 C1orf198Q9H425 327 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 METTL17Q9H7H0 456 aaPredicted RBP8.64□□□□□ -1.03
NPHP3-209ENST00000493732 KLHL13Q9P2N7 655 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 EIF3KQ9UBQ5 218 aaKnown RBP8.64□□□□□ -1.03
NPHP3-209ENST00000493732 ZNF69Q9UC07 566 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 VDAC3Q9Y277 283 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 EMC9Q9Y3B6 208 aa8.64□□□□□ -1.03
NPHP3-209ENST00000493732 TP53BP1Q12888 1972 aaPredicted RBP8.63□□□□□ -1.03
NPHP3-209ENST00000493732 ABCA7Q8IZY2 2146 aa8.63□□□□□ -1.03
NPHP3-209ENST00000493732 A0A087WV48 116 aa8.63□□□□□ -1.03
NPHP3-209ENST00000493732 A0A087WZY1 265 aa8.63□□□□□ -1.03
NPHP3-209ENST00000493732 LOC102725191A0A1B0GVB3 256 aa8.63□□□□□ -1.03
NPHP3-209ENST00000493732 LOC107986453A0A1B0GWG9 222 aa8.63□□□□□ -1.03
NPHP3-209ENST00000493732 A6NL46 340 aa8.63□□□□□ -1.03
NPHP3-209ENST00000493732 C17orf51A8MQB3 221 aa8.63□□□□□ -1.03
NPHP3-209ENST00000493732 OR2A4O95047 310 aa8.63□□□□□ -1.03
NPHP3-209ENST00000493732 HLA-DOBP13765 273 aa8.63□□□□□ -1.03
NPHP3-209ENST00000493732 GTF2F2P13984 249 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms