RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 ZNF566Q969W8 418 aa10.67□□□□□ -0.7
UPF3A-210ENST00000493727 MUS81Q96NY9 551 aa10.67□□□□□ -0.7
UPF3A-210ENST00000493727 ZNF385AQ96PM9 386 aaKnown RBP10.67□□□□□ -0.7
UPF3A-210ENST00000493727 IL4I1Q96RQ9 567 aa10.67□□□□□ -0.7
UPF3A-210ENST00000493727 RNF122Q9H9V4 155 aa10.67□□□□□ -0.7
UPF3A-210ENST00000493727 BCO1Q9HAY6 547 aa10.67□□□□□ -0.7
UPF3A-210ENST00000493727 CMC2Q9NRP2 79 aa10.67□□□□□ -0.7
UPF3A-210ENST00000493727 RCE1Q9Y256 329 aa10.67□□□□□ -0.7
UPF3A-210ENST00000493727 GPR52Q9Y2T5 361 aa10.67□□□□□ -0.7
UPF3A-210ENST00000493727 MXRA5Q9NR99 2828 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 PRR23D1E9PI22 279 aaPredicted RBP10.66□□□□□ -0.7
UPF3A-210ENST00000493727 C16orf97H3BN30 126 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 PRKYO43930 277 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 SMPD2O60906 423 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 SS18L1O75177 396 aaPredicted RBP10.66□□□□□ -0.7
UPF3A-210ENST00000493727 TRMUO75648 421 aaKnown RBP10.66□□□□□ -0.7
UPF3A-210ENST00000493727 LY6G6DO95868 133 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 GNAO1P09471 354 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 PRR23D2P0DMB1 279 aaPredicted RBP10.66□□□□□ -0.7
UPF3A-210ENST00000493727 NR2C1P13056 603 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 ACADSP16219 412 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 CRYGSP22914 178 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 AGTR1P30556 359 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 UGT2B10P36537 528 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 KIR2DL2P43627 348 aaPredicted RBP10.66□□□□□ -0.7
UPF3A-210ENST00000493727 CSNK1A1P48729 337 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 SELENOPP49908 381 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 NKX6-1P78426 367 aaPredicted RBP10.66□□□□□ -0.7
UPF3A-210ENST00000493727 FAM27E3Q08E93 113 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 ITGADQ13349 1161 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 CRMP1Q14194 572 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 ARMC4Q5T2S8 1044 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 CXXC5Q7LFL8 322 aaKnown RBP10.66□□□□□ -0.7
UPF3A-210ENST00000493727 ZNF100Q8IYN0 542 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 CYB561A3Q8NBI2 242 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 SLC37A3Q8NCC5 494 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 NOXO1Q8NFA2 376 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 OR8J1Q8NGP2 316 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 OR6N1Q8NGY5 312 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 OR6X1Q8NH79 312 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 TMEM163Q8TC26 289 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 TMEM45BQ96B21 275 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 SLC25A44Q96H78 314 aaPredicted RBP10.66□□□□□ -0.7
UPF3A-210ENST00000493727 WFIKKN1Q96NZ8 548 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 NMNAT3Q96T66 252 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 ALG12Q9BV10 488 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 ANKRD60Q9BZ19 345 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 RERGLQ9H628 205 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 B3GAT2Q9NPZ5 323 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 PARPBPQ9NWS1 579 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 H2AFY2Q9P0M6 372 aaPredicted RBP10.66□□□□□ -0.7
UPF3A-210ENST00000493727 PROCRQ9UNN8 238 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 HSPE1-MOB4S4R3N1 261 aa10.66□□□□□ -0.7
UPF3A-210ENST00000493727 RAI1Q7Z5J4 1906 aaPredicted RBP10.66□□□□□ -0.7
UPF3A-210ENST00000493727 PRSS37A4D1T9 235 aa10.65□□□□□ -0.7
UPF3A-210ENST00000493727 FAM183AA6NL82 134 aa10.65□□□□□ -0.7
UPF3A-210ENST00000493727 E9PQ18 207 aa10.65□□□□□ -0.7
UPF3A-210ENST00000493727 KRT33AO76009 404 aa10.65□□□□□ -0.7
UPF3A-210ENST00000493727 PPP3CBP16298 524 aa10.65□□□□□ -0.7
UPF3A-210ENST00000493727 MYF6P23409 242 aa10.65□□□□□ -0.7
UPF3A-210ENST00000493727 CDKN2AP42771 156 aaKnown RBP10.65□□□□□ -0.7
UPF3A-210ENST00000493727 RPS7P62081 194 aaKnown RBP10.65□□□□□ -0.7
UPF3A-210ENST00000493727 RUNX1T1Q06455 604 aa10.65□□□□□ -0.7
UPF3A-210ENST00000493727 MED21Q13503 144 aa10.65□□□□□ -0.7
UPF3A-210ENST00000493727 PLBD1Q6P4A8 553 aa10.65□□□□□ -0.7
UPF3A-210ENST00000493727 DNM1P34Q6PK57 102 aa10.65□□□□□ -0.7
UPF3A-210ENST00000493727 ZNF474Q6S9Z5 364 aaPredicted RBP10.65□□□□□ -0.7
UPF3A-210ENST00000493727 PRSS57Q6UWY2 283 aa10.65□□□□□ -0.7
UPF3A-210ENST00000493727 USP51Q70EK9 711 aa10.65□□□□□ -0.7
UPF3A-210ENST00000493727 ENTHD1Q8IYW4 607 aa10.65□□□□□ -0.7
UPF3A-210ENST00000493727 CIARTQ8N365 385 aaPredicted RBP10.65□□□□□ -0.7
UPF3A-210ENST00000493727 ZIC4Q8N9L1 334 aa10.65□□□□□ -0.7
UPF3A-210ENST00000493727 OR9Q1Q8NGQ5 310 aa10.65□□□□□ -0.7
UPF3A-210ENST00000493727 TRUB1Q8WWH5 349 aaKnown RBP10.65□□□□□ -0.7
UPF3A-210ENST00000493727 HDAC2Q92769 488 aaKnown RBP10.65□□□□□ -0.7
UPF3A-210ENST00000493727 APH1AQ96BI3 265 aa10.65□□□□□ -0.7
UPF3A-210ENST00000493727 Q96MT0 163 aa10.65□□□□□ -0.7
UPF3A-210ENST00000493727 RBP7Q96R05 134 aa10.65□□□□□ -0.7
UPF3A-210ENST00000493727 OR2M2Q96R28 347 aa10.65□□□□□ -0.7
UPF3A-210ENST00000493727 OPN3Q9H1Y3 402 aaPredicted RBP10.65□□□□□ -0.7
UPF3A-210ENST00000493727 SYT4Q9H2B2 425 aa10.65□□□□□ -0.7
UPF3A-210ENST00000493727 FN3KQ9H479 309 aa10.65□□□□□ -0.7
UPF3A-210ENST00000493727 RPRD1BQ9NQG5 326 aaKnown RBP10.65□□□□□ -0.7
UPF3A-210ENST00000493727 CLN6Q9NWW5 311 aa10.65□□□□□ -0.7
UPF3A-210ENST00000493727 ASB6Q9NWX5 421 aa10.65□□□□□ -0.7
UPF3A-210ENST00000493727 DNAJC27Q9NZQ0 273 aa10.65□□□□□ -0.7
UPF3A-210ENST00000493727 ING1Q9UK53 422 aaPredicted RBP10.65□□□□□ -0.7
UPF3A-210ENST00000493727 CHD3Q12873 2000 aaKnown RBP10.64□□□□□ -0.71
UPF3A-210ENST00000493727 SLC22A23A1A5C7 686 aa10.64□□□□□ -0.71
UPF3A-210ENST00000493727 OR6C65A6NJZ3 312 aa10.64□□□□□ -0.71
UPF3A-210ENST00000493727 DEFB108AA8MXU0 73 aa10.64□□□□□ -0.71
UPF3A-210ENST00000493727 CENPBD1B2RD01 187 aa10.64□□□□□ -0.71
UPF3A-210ENST00000493727 AHCYL1O43865 530 aa10.64□□□□□ -0.71
UPF3A-210ENST00000493727 CGAP01215 116 aa10.64□□□□□ -0.71
UPF3A-210ENST00000493727 PGA4P0DJD7 388 aa10.64□□□□□ -0.71
UPF3A-210ENST00000493727 PGA3P0DJD8 388 aa10.64□□□□□ -0.71
UPF3A-210ENST00000493727 CENPAP49450 140 aa10.64□□□□□ -0.71
UPF3A-210ENST00000493727 SNRPGP62308 76 aaKnown RBP10.64□□□□□ -0.71
UPF3A-210ENST00000493727 LGALS3BPQ08380 585 aa10.64□□□□□ -0.71
UPF3A-210ENST00000493727 MAD2L1BPQ15013 274 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms