RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 MUCL1Q96DR8 90 aa10.9□□□□□ -0.66
SNX17-208ENST00000493711 ZNF837Q96EG3 531 aaPredicted RBP10.9□□□□□ -0.66
SNX17-208ENST00000493711 MRPL48Q96GC5 212 aaKnown RBP10.9□□□□□ -0.66
SNX17-208ENST00000493711 YIPF3Q9GZM5 350 aa10.9□□□□□ -0.66
SNX17-208ENST00000493711 CCNB1IP1Q9NPC3 277 aa10.9□□□□□ -0.66
SNX17-208ENST00000493711 SLC17A5Q9NRA2 495 aa10.9□□□□□ -0.66
SNX17-208ENST00000493711 MRPS18AQ9NVS2 196 aaKnown RBP10.9□□□□□ -0.66
SNX17-208ENST00000493711 POLR1DQ9Y2S0 133 aa10.9□□□□□ -0.66
SNX17-208ENST00000493711 TIMM10BQ9Y5J6 103 aa10.9□□□□□ -0.66
SNX17-208ENST00000493711 RELNP78509 3460 aa10.9□□□□□ -0.66
SNX17-208ENST00000493711 BSNQ9UPA5 3926 aa10.9□□□□□ -0.67
SNX17-208ENST00000493711 SVILO95425 2214 aa10.89□□□□□ -0.67
SNX17-208ENST00000493711 CCDC182A6NF36 153 aa10.89□□□□□ -0.67
SNX17-208ENST00000493711 OR5H1A6NKK0 313 aa10.89□□□□□ -0.67
SNX17-208ENST00000493711 FAM171A2A8MVW0 826 aa10.89□□□□□ -0.67
SNX17-208ENST00000493711 PHYHO14832 338 aa10.89□□□□□ -0.67
SNX17-208ENST00000493711 RAD51DO75771 328 aa10.89□□□□□ -0.67
SNX17-208ENST00000493711 TFP02787 698 aa10.89□□□□□ -0.67
SNX17-208ENST00000493711 CCDC159P0C7I6 412 aa10.89□□□□□ -0.67
SNX17-208ENST00000493711 PIPP12273 146 aaPredicted RBP10.89□□□□□ -0.67
SNX17-208ENST00000493711 CDAP32320 146 aa10.89□□□□□ -0.67
SNX17-208ENST00000493711 ACTC1P68032 377 aa10.89□□□□□ -0.67
SNX17-208ENST00000493711 ACTA1P68133 377 aa10.89□□□□□ -0.67
SNX17-208ENST00000493711 ADAM8P78325 824 aa10.89□□□□□ -0.67
SNX17-208ENST00000493711 SCRN3Q0VDG4 424 aa10.89□□□□□ -0.67
SNX17-208ENST00000493711 AQP6Q13520 282 aa10.89□□□□□ -0.67
SNX17-208ENST00000493711 PCK2Q16822 640 aa10.89□□□□□ -0.67
SNX17-208ENST00000493711 TBRG1Q3YBR2 411 aa10.89□□□□□ -0.67
SNX17-208ENST00000493711 RBM48Q5RL73 367 aaKnown RBP10.89□□□□□ -0.67
SNX17-208ENST00000493711 C9orf135Q5VTT2 229 aa10.89□□□□□ -0.67
SNX17-208ENST00000493711 BCDIN3DQ7Z5W3 292 aaKnown RBP10.89□□□□□ -0.67
SNX17-208ENST00000493711 EGFL6Q8IUX8 553 aa10.89□□□□□ -0.67
SNX17-208ENST00000493711 ERI1Q8IV48 349 aaKnown RBP10.89□□□□□ -0.67
SNX17-208ENST00000493711 TIGD4Q8IY51 512 aa10.89□□□□□ -0.67
SNX17-208ENST00000493711 FAM169BQ8N8A8 192 aa10.89□□□□□ -0.67
SNX17-208ENST00000493711 OR51L1Q8NGJ5 315 aa10.89□□□□□ -0.67
SNX17-208ENST00000493711 CNIH3Q8TBE1 160 aa10.89□□□□□ -0.67
SNX17-208ENST00000493711 SSC4DQ8WTU2 575 aa10.89□□□□□ -0.67
SNX17-208ENST00000493711 APH1BQ8WW43 257 aa10.89□□□□□ -0.67
SNX17-208ENST00000493711 C11orf40Q8WZ69 217 aa10.89□□□□□ -0.67
SNX17-208ENST00000493711 ZMYND19Q96E35 227 aaPredicted RBP10.89□□□□□ -0.67
SNX17-208ENST00000493711 RNFT2Q96EX2 444 aa10.89□□□□□ -0.67
SNX17-208ENST00000493711 WDR76Q9H967 626 aa10.89□□□□□ -0.67
SNX17-208ENST00000493711 INPP5EQ9NRR6 644 aa10.89□□□□□ -0.67
SNX17-208ENST00000493711 CNOT2Q9NZN8 540 aaKnown RBP10.89□□□□□ -0.67
SNX17-208ENST00000493711 NDRG3Q9UGV2 375 aa10.89□□□□□ -0.67
SNX17-208ENST00000493711 LRCH1Q9Y2L9 728 aa10.89□□□□□ -0.67
SNX17-208ENST00000493711 TPRKBQ9Y3C4 175 aa10.89□□□□□ -0.67
SNX17-208ENST00000493711 KLF2Q9Y5W3 355 aaPredicted RBP10.89□□□□□ -0.67
SNX17-208ENST00000493711 COMMD3-BMI1R4GMX3 469 aa10.89□□□□□ -0.67
SNX17-208ENST00000493711 FLNCQ14315 2725 aa10.89□□□□□ -0.67
SNX17-208ENST00000493711 MYO9AB2RTY4 2548 aa10.88□□□□□ -0.67
SNX17-208ENST00000493711 ZNF593O00488 134 aaPredicted RBP10.88□□□□□ -0.67
SNX17-208ENST00000493711 FAM20BO75063 409 aa10.88□□□□□ -0.67
SNX17-208ENST00000493711 PTHP01270 115 aa10.88□□□□□ -0.67
SNX17-208ENST00000493711 SBK2P0C263 348 aa10.88□□□□□ -0.67
SNX17-208ENST00000493711 DBTP11182 482 aaKnown RBP10.88□□□□□ -0.67
SNX17-208ENST00000493711 NUDT6P53370 316 aa10.88□□□□□ -0.67
SNX17-208ENST00000493711 FOXG1P55316 489 aaPredicted RBP10.88□□□□□ -0.67
SNX17-208ENST00000493711 PLP2Q04941 152 aa10.88□□□□□ -0.67
SNX17-208ENST00000493711 ZNF91Q05481 1191 aa10.88□□□□□ -0.67
SNX17-208ENST00000493711 FAM27E3Q08E93 113 aa10.88□□□□□ -0.67
SNX17-208ENST00000493711 RHOUQ7L0Q8 258 aa10.88□□□□□ -0.67
SNX17-208ENST00000493711 ALDH16A1Q8IZ83 802 aa10.88□□□□□ -0.67
SNX17-208ENST00000493711 GJC3Q8NFK1 279 aa10.88□□□□□ -0.67
SNX17-208ENST00000493711 IPCEF1Q8WWN9 437 aaPredicted RBP10.88□□□□□ -0.67
SNX17-208ENST00000493711 ASB17Q8WXJ9 295 aa10.88□□□□□ -0.67
SNX17-208ENST00000493711 ZNF416Q9BWM5 594 aa10.88□□□□□ -0.67
SNX17-208ENST00000493711 ACTR6Q9GZN1 396 aa10.88□□□□□ -0.67
SNX17-208ENST00000493711 C1orf198Q9H425 327 aa10.88□□□□□ -0.67
SNX17-208ENST00000493711 NGBQ9NPG2 151 aa10.88□□□□□ -0.67
SNX17-208ENST00000493711 MRPL22Q9NWU5 206 aaKnown RBP10.88□□□□□ -0.67
SNX17-208ENST00000493711 CYB5R1Q9UHQ9 305 aa10.88□□□□□ -0.67
SNX17-208ENST00000493711 ATPIF1Q9UII2 106 aa10.88□□□□□ -0.67
SNX17-208ENST00000493711 EXOGQ9Y2C4 368 aaKnown RBP10.88□□□□□ -0.67
SNX17-208ENST00000493711 KIAA1549Q9HCM3 1950 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 NBPF19A0A087WUL8 3843 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 A0A096LPE4 126 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 A0A1W2PPZ6 126 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 CLEC18AA5D8T8 446 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 NKX2-6A6NCS4 301 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 TVP23AA6NH52 213 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 ZNF670-ZNF695F2Z2N8 137 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 RAB36O95755 333 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 OR2T7P0C7T2 308 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 DCKP27707 260 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 SLC15A1P46059 708 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 CAPZA2P47755 286 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 ECH1Q13011 328 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 ENDOGQ14249 297 aaKnown RBP10.87□□□□□ -0.67
SNX17-208ENST00000493711 GSG1Q2KHT4 349 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 C3orf36Q3SXR2 165 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 HIKESHIQ53FT3 197 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 SLC18B1Q6NT16 456 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 KCTD18Q6PI47 426 aaPredicted RBP10.87□□□□□ -0.67
SNX17-208ENST00000493711 CLEC18BQ6UXF7 455 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 SKA3Q8IX90 412 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 ZNF786Q8N393 782 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 CLEC18CQ8NCF0 446 aa10.87□□□□□ -0.67
SNX17-208ENST00000493711 BPIFB6Q8NFQ5 453 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms