RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 SPATA46Q5T0L3 261 aa9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 SYT9Q86SS6 491 aa9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 MSRB3Q8IXL7 192 aa9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 BCL6BQ8N143 479 aaPredicted RBP9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 ANKRD42Q8N9B4 389 aa9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 OR6T1Q8NGN1 323 aa9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 NABP1Q96AH0 204 aa9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 UPRTQ96BW1 309 aa9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 PLEKHA8Q96JA3 519 aa9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 COG8Q96MW5 612 aa9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 DCLRE1CQ96SD1 692 aaKnown RBP9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 WFDC6Q9BQY6 131 aa9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 POLR2J2Q9GZM3 115 aaKnown RBP9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 POLR2J3Q9H1A7 115 aaKnown RBP9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 MMP27Q9H306 513 aa9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 PRDM13Q9H4Q3 707 aa9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 VIPAS39Q9H9C1 493 aa9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 NPHS2Q9NP85 383 aa9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 INIPQ9NRY2 104 aa9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 FAM53CQ9NYF3 392 aa9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 ARMCX1Q9P291 453 aa9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 SLC7A7Q9UM01 511 aa9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 LOC100509620A0A075B734 347 aa9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 HTR3EA5X5Y0 456 aa9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 M0R3H8 397 aa9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 POLR3GO15318 223 aaPredicted RBP9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 TIMM8AO60220 97 aaPredicted RBP9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 TGDSO95455 350 aa9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 PLATP00750 562 aa9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 MT-ND1P03886 318 aa9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 CRYBA1P05813 215 aa9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 CST2P09228 141 aa9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 COX5BP10606 129 aa9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 CD247P20963 164 aa9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 WDR4P57081 412 aaKnown RBP9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 PSG4Q00888 419 aa9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 RPL18Q07020 188 aaKnown RBP9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 ARMC4Q5T2S8 1044 aa9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 INTS11Q5TA45 600 aaKnown RBP9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 RFPL4BQ6ZWI9 263 aa9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 SPATC1Q76KD6 591 aa9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 ZNF771Q7L3S4 317 aaPredicted RBP9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 MAVSQ7Z434 540 aa9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 PATL1Q86TB9 770 aaKnown RBP9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 C10orf111Q8N326 155 aa9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 TMEM86BQ8N661 226 aa9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 SMYD1Q8NB12 490 aa9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 WFDC12Q8WWY7 111 aa9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 LIPHQ8WWY8 451 aa9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 C4orf45Q96LM5 186 aa9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 RBP7Q96R05 134 aa9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 ALG12Q9BV10 488 aa9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 SSBP3Q9BWW4 388 aaPredicted RBP9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 C1QTNF5Q9BXJ0 243 aa9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 OR2H1Q9GZK4 316 aa9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 MSL2Q9HCI7 577 aa9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 TBCCD1Q9NVR7 557 aa9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 CCDC167Q9P0B6 97 aa9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 PPP1R3CQ9UQK1 317 aa9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 ZNF281Q9Y2X9 895 aa9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 UGT2A1Q9Y4X1 527 aa9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 TIMM10BQ9Y5J6 103 aa9.25□□□□□ -0.93
SNRNP200-207ENST00000493271 TMEM120BA0PK00 339 aa9.24□□□□□ -0.93
SNRNP200-207ENST00000493271 C12orf71A8MTZ7 269 aa9.24□□□□□ -0.93
SNRNP200-207ENST00000493271 J3QW42 95 aa9.24□□□□□ -0.93
SNRNP200-207ENST00000493271 M0QX08 132 aa9.24□□□□□ -0.93
SNRNP200-207ENST00000493271 KPNA4O00629 521 aaPredicted RBP9.24□□□□□ -0.93
SNRNP200-207ENST00000493271 NDUFA7O95182 113 aa9.24□□□□□ -0.93
SNRNP200-207ENST00000493271 LYPD3O95274 346 aa9.24□□□□□ -0.93
SNRNP200-207ENST00000493271 THY1P04216 161 aa9.24□□□□□ -0.93
SNRNP200-207ENST00000493271 F13BP05160 661 aa9.24□□□□□ -0.93
SNRNP200-207ENST00000493271 TSPAN19P0C672 248 aa9.24□□□□□ -0.93
SNRNP200-207ENST00000493271 FUT1P19526 365 aa9.24□□□□□ -0.93
SNRNP200-207ENST00000493271 KITLGP21583 273 aa9.24□□□□□ -0.93
SNRNP200-207ENST00000493271 CD47Q08722 323 aa9.24□□□□□ -0.93
SNRNP200-207ENST00000493271 PDCD1Q15116 288 aa9.24□□□□□ -0.93
SNRNP200-207ENST00000493271 ZMYND11Q15326 602 aa9.24□□□□□ -0.93
SNRNP200-207ENST00000493271 SGCAQ16586 387 aa9.24□□□□□ -0.93
SNRNP200-207ENST00000493271 TMEM255AQ5JRV8 349 aa9.24□□□□□ -0.93
SNRNP200-207ENST00000493271 SLC27A4Q6P1M0 643 aa9.24□□□□□ -0.93
SNRNP200-207ENST00000493271 EPGNQ6UW88 154 aa9.24□□□□□ -0.93
SNRNP200-207ENST00000493271 FUNDC1Q8IVP5 155 aa9.24□□□□□ -0.93
SNRNP200-207ENST00000493271 AKR7LQ8NHP1 331 aa9.24□□□□□ -0.93
SNRNP200-207ENST00000493271 SLC26A7Q8TE54 656 aa9.24□□□□□ -0.93
SNRNP200-207ENST00000493271 NMD3Q96D46 503 aaKnown RBP9.24□□□□□ -0.93
SNRNP200-207ENST00000493271 SIGLEC11Q96RL6 698 aa9.24□□□□□ -0.93
SNRNP200-207ENST00000493271 TXNIPQ9H3M7 391 aa9.24□□□□□ -0.93
SNRNP200-207ENST00000493271 NOX4Q9NPH5 578 aa9.24□□□□□ -0.93
SNRNP200-207ENST00000493271 MEPEQ9NQ76 525 aaPredicted RBP9.24□□□□□ -0.93
SNRNP200-207ENST00000493271 NKIRAS1Q9NYS0 192 aa9.24□□□□□ -0.93
SNRNP200-207ENST00000493271 SLAMF8Q9P0V8 285 aa9.24□□□□□ -0.93
SNRNP200-207ENST00000493271 MIOXQ9UGB7 285 aa9.24□□□□□ -0.93
SNRNP200-207ENST00000493271 PRKDCP78527 4128 aaKnown RBP9.23□□□□□ -0.93
SNRNP200-207ENST00000493271 TRAV40A0A0B4J280 105 aa9.23□□□□□ -0.93
SNRNP200-207ENST00000493271 IGHV2-70DA0A0C4DH43 119 aa9.23□□□□□ -0.93
SNRNP200-207ENST00000493271 CEACAM18A8MTB9 384 aa9.23□□□□□ -0.93
SNRNP200-207ENST00000493271 SRRM5B3KS81 715 aa9.23□□□□□ -0.93
SNRNP200-207ENST00000493271 TMEM178BH3BS89 294 aa9.23□□□□□ -0.93
SNRNP200-207ENST00000493271 OR7A10O76100 309 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms