RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 CDADC1Q9BWV3 514 aa15.04■□□□□ -0
LIME1-208ENST00000493265 C1QTNF6Q9BXI9 259 aa15.04■□□□□ -0
LIME1-208ENST00000493265 KCNN2Q9H2S1 579 aa15.04■□□□□ -0
LIME1-208ENST00000493265 Q9H521 79 aa15.04■□□□□ -0
LIME1-208ENST00000493265 RNF121Q9H920 327 aa15.04■□□□□ -0
LIME1-208ENST00000493265 WDR76Q9H967 626 aa15.04■□□□□ -0
LIME1-208ENST00000493265 AMBNQ9NP70 447 aa15.04■□□□□ -0
LIME1-208ENST00000493265 NPDC1Q9NQX5 325 aaPredicted RBP15.04■□□□□ -0
LIME1-208ENST00000493265 SLC17A5Q9NRA2 495 aa15.04■□□□□ -0
LIME1-208ENST00000493265 MRPL22Q9NWU5 206 aaKnown RBP15.04■□□□□ -0
LIME1-208ENST00000493265 KLF2Q9Y5W3 355 aaPredicted RBP15.04■□□□□ -0
LIME1-208ENST00000493265 OR5H1A6NKK0 313 aa15.03■□□□□ -0
LIME1-208ENST00000493265 SLC22A31A6NKX4 558 aa15.03■□□□□ -0
LIME1-208ENST00000493265 C19orf84I3L1E1 186 aa15.03■□□□□ -0
LIME1-208ENST00000493265 SELENOFO60613 162 aa15.03■□□□□ -0
LIME1-208ENST00000493265 WBP4O75554 376 aaKnown RBP15.03■□□□□ -0
LIME1-208ENST00000493265 SPARCP09486 303 aa15.03■□□□□ -0
LIME1-208ENST00000493265 MYF6P23409 242 aa15.03■□□□□ -0
LIME1-208ENST00000493265 ADAM8P78325 824 aa15.03■□□□□ -0
LIME1-208ENST00000493265 FOXL2NBQ6ZUU3 175 aa15.03■□□□□ -0
LIME1-208ENST00000493265 SHFQ7M4L6 423 aa15.03■□□□□ -0
LIME1-208ENST00000493265 LINC00346Q8IVM7 164 aa15.03■□□□□ -0
LIME1-208ENST00000493265 OR6N2Q8NGY6 317 aa15.03■□□□□ -0
LIME1-208ENST00000493265 FGFBP3Q8TAT2 258 aa15.03■□□□□ -0
LIME1-208ENST00000493265 LINC01560Q8TB33 94 aa15.03■□□□□ -0
LIME1-208ENST00000493265 INTS14Q96SY0 518 aa15.03■□□□□ -0
LIME1-208ENST00000493265 MED18Q9BUE0 208 aa15.03■□□□□ -0
LIME1-208ENST00000493265 ANKRD60Q9BZ19 345 aa15.03■□□□□ -0
LIME1-208ENST00000493265 COMMD3-BMI1R4GMX3 469 aa15.03■□□□□ -0
LIME1-208ENST00000493265 ADGRG4Q8IZF6 3080 aa15.02■□□□□ -0
LIME1-208ENST00000493265 AKAP9Q99996 3911 aa15.02■□□□□ -0
LIME1-208ENST00000493265 ZNF503-AS2A6NEH8 195 aa15.02■□□□□ -0
LIME1-208ENST00000493265 COX6B1P14854 86 aa15.02■□□□□ -0
LIME1-208ENST00000493265 HTR1FP30939 366 aa15.02■□□□□ -0
LIME1-208ENST00000493265 ATP6V1E1P36543 226 aa15.02■□□□□ -0
LIME1-208ENST00000493265 BLVRAP53004 296 aa15.02■□□□□ -0
LIME1-208ENST00000493265 RIPPLY3P57055 190 aa15.02■□□□□ -0
LIME1-208ENST00000493265 CDK5R2Q13319 367 aa15.02■□□□□ -0
LIME1-208ENST00000493265 ENDOGQ14249 297 aaKnown RBP15.02■□□□□ -0
LIME1-208ENST00000493265 SLC25A30Q5SVS4 291 aa15.02■□□□□ -0
LIME1-208ENST00000493265 FAM27BQ5VT28 67 aa15.02■□□□□ -0
LIME1-208ENST00000493265 KRT80Q6KB66 452 aa15.02■□□□□ -0
LIME1-208ENST00000493265 TMEM154Q6P9G4 183 aa15.02■□□□□ -0
LIME1-208ENST00000493265 CORO6Q6QEF8 472 aa15.02■□□□□ -0
LIME1-208ENST00000493265 ZNF627Q7L945 461 aa15.02■□□□□ -0
LIME1-208ENST00000493265 WFDC8Q8IUA0 241 aa15.02■□□□□ -0
LIME1-208ENST00000493265 WDR31Q8NA23 367 aa15.02■□□□□ -0
LIME1-208ENST00000493265 OR51G2Q8NGK0 314 aa15.02■□□□□ -0
LIME1-208ENST00000493265 MUCL1Q96DR8 90 aa15.02■□□□□ -0
LIME1-208ENST00000493265 FBXO17Q96EF6 278 aa15.02■□□□□ -0
LIME1-208ENST00000493265 LURAP1Q96LR2 239 aa15.02■□□□□ -0
LIME1-208ENST00000493265 WFIKKN1Q96NZ8 548 aa15.02■□□□□ -0
LIME1-208ENST00000493265 CCNB1IP1Q9NPC3 277 aa15.02■□□□□ -0
LIME1-208ENST00000493265 ASH2LQ9UBL3 628 aa15.02■□□□□ -0
LIME1-208ENST00000493265 WARS2Q9UGM6 360 aaKnown RBP15.02■□□□□ -0
LIME1-208ENST00000493265 HSPE1-MOB4S4R3N1 261 aa15.02■□□□□ -0
LIME1-208ENST00000493265 CELSR1Q9NYQ6 3014 aa15.02□□□□□ -0.01
LIME1-208ENST00000493265 SNTNA6NMZ2 147 aa15.01□□□□□ -0.01
LIME1-208ENST00000493265 C12orf71A8MTZ7 269 aa15.01□□□□□ -0.01
LIME1-208ENST00000493265 ZNF593O00488 134 aaPredicted RBP15.01□□□□□ -0.01
LIME1-208ENST00000493265 CST2P09228 141 aa15.01□□□□□ -0.01
LIME1-208ENST00000493265 ENTPD1P49961 510 aa15.01□□□□□ -0.01
LIME1-208ENST00000493265 HCCSP53701 268 aa15.01□□□□□ -0.01
LIME1-208ENST00000493265 ZNF91Q05481 1191 aa15.01□□□□□ -0.01
LIME1-208ENST00000493265 PPA1Q15181 289 aa15.01□□□□□ -0.01
LIME1-208ENST00000493265 TAB1Q15750 504 aa15.01□□□□□ -0.01
LIME1-208ENST00000493265 KCNMB1Q16558 191 aa15.01□□□□□ -0.01
LIME1-208ENST00000493265 SLC36A2Q495M3 483 aa15.01□□□□□ -0.01
LIME1-208ENST00000493265 TIMM23BQ5SRD1 257 aa15.01□□□□□ -0.01
LIME1-208ENST00000493265 C22orf34Q6ZV56 151 aa15.01□□□□□ -0.01
LIME1-208ENST00000493265 MDP1Q86V88 176 aa15.01□□□□□ -0.01
LIME1-208ENST00000493265 C17orf78Q8N4C9 275 aa15.01□□□□□ -0.01
LIME1-208ENST00000493265 BPIFB6Q8NFQ5 453 aa15.01□□□□□ -0.01
LIME1-208ENST00000493265 OR2AJ1Q8NGZ0 328 aa15.01□□□□□ -0.01
LIME1-208ENST00000493265 NANOS1Q8WY41 292 aaKnown RBP15.01□□□□□ -0.01
LIME1-208ENST00000493265 RNFT2Q96EX2 444 aa15.01□□□□□ -0.01
LIME1-208ENST00000493265 CNN2Q99439 309 aaKnown RBP15.01□□□□□ -0.01
LIME1-208ENST00000493265 NOX3Q9HBY0 568 aa15.01□□□□□ -0.01
LIME1-208ENST00000493265 ZNF224Q9NZL3 707 aa15.01□□□□□ -0.01
LIME1-208ENST00000493265 NDRG3Q9UGV2 375 aa15.01□□□□□ -0.01
LIME1-208ENST00000493265 ITGB1BP2Q9UKP3 347 aa15.01□□□□□ -0.01
LIME1-208ENST00000493265 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.01□□□□□ -0.01
LIME1-208ENST00000493265 AMDHD2Q9Y303 409 aa15.01□□□□□ -0.01
LIME1-208ENST00000493265 PCDHGB5Q9Y5G0 923 aa15.01□□□□□ -0.01
LIME1-208ENST00000493265 DCHS2Q6V1P9 2916 aa15.01□□□□□ -0.01
LIME1-208ENST00000493265 TUBAL3A6NHL2 446 aa15□□□□□ -0.01
LIME1-208ENST00000493265 WNT11O96014 354 aa15□□□□□ -0.01
LIME1-208ENST00000493265 PSKH1P11801 424 aa15□□□□□ -0.01
LIME1-208ENST00000493265 ZNF32P17041 273 aa15□□□□□ -0.01
LIME1-208ENST00000493265 MTNR1AP48039 350 aa15□□□□□ -0.01
LIME1-208ENST00000493265 ZNF83P51522 516 aa15□□□□□ -0.01
LIME1-208ENST00000493265 LSM6P62312 80 aaKnown RBP15□□□□□ -0.01
LIME1-208ENST00000493265 RAB1AP62820 205 aa15□□□□□ -0.01
LIME1-208ENST00000493265 NRN1LQ496H8 165 aa15□□□□□ -0.01
LIME1-208ENST00000493265 TMEM53Q6P2H8 277 aa15□□□□□ -0.01
LIME1-208ENST00000493265 DPY19L4Q7Z388 723 aa15□□□□□ -0.01
LIME1-208ENST00000493265 TIGD4Q8IY51 512 aa15□□□□□ -0.01
LIME1-208ENST00000493265 HSD17B8Q92506 261 aa15□□□□□ -0.01
LIME1-208ENST00000493265 TBX5Q99593 518 aa15□□□□□ -0.01
LIME1-208ENST00000493265 TTTY10Q9BZA0 68 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms