RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	C11orf65	Q8NCR3	313 aa		11.51	□□□□□ -0.57
SAMM50-204	ENST00000493161	TMEM255B	Q8WV15	326 aa		11.51	□□□□□ -0.57
SAMM50-204	ENST00000493161	SLC25A28	Q96A46	364 aa		11.51	□□□□□ -0.57
SAMM50-204	ENST00000493161	MPP4	Q96JB8	637 aa		11.51	□□□□□ -0.57
SAMM50-204	ENST00000493161	MRI1	Q9BV20	369 aa		11.51	□□□□□ -0.57
SAMM50-204	ENST00000493161	SLC19A3	Q9BZV2	496 aa		11.51	□□□□□ -0.57
SAMM50-204	ENST00000493161	MS4A7	Q9GZW8	240 aa	Predicted RBP	11.51	□□□□□ -0.57
SAMM50-204	ENST00000493161	PCDHAC1	Q9H158	963 aa		11.51	□□□□□ -0.57
SAMM50-204	ENST00000493161	ZMAT3	Q9HA38	289 aa	Known RBP	11.51	□□□□□ -0.57
SAMM50-204	ENST00000493161	CORO2B	Q9UQ03	480 aa		11.51	□□□□□ -0.57
SAMM50-204	ENST00000493161		A8MXK9	166 aa		11.5	□□□□□ -0.57
SAMM50-204	ENST00000493161	CENPBD1	B2RD01	187 aa		11.5	□□□□□ -0.57
SAMM50-204	ENST00000493161	CLDN34	H7C241	214 aa		11.5	□□□□□ -0.57
SAMM50-204	ENST00000493161	POLR3G	O15318	223 aa	Predicted RBP	11.5	□□□□□ -0.57
SAMM50-204	ENST00000493161	TIMM8A	O60220	97 aa	Predicted RBP	11.5	□□□□□ -0.57
SAMM50-204	ENST00000493161	ICMT	O60725	284 aa		11.5	□□□□□ -0.57
SAMM50-204	ENST00000493161	MT-ND1	P03886	318 aa		11.5	□□□□□ -0.57
SAMM50-204	ENST00000493161	SCG5	P05408	212 aa		11.5	□□□□□ -0.57
SAMM50-204	ENST00000493161	TNFRSF1B	P20333	461 aa		11.5	□□□□□ -0.57
SAMM50-204	ENST00000493161	PCGF2	P35227	344 aa		11.5	□□□□□ -0.57
SAMM50-204	ENST00000493161	LIPA	P38571	399 aa		11.5	□□□□□ -0.57
SAMM50-204	ENST00000493161	DAP3	P51398	398 aa	Known RBP	11.5	□□□□□ -0.57
SAMM50-204	ENST00000493161	MAGOH	P61326	146 aa	Known RBP	11.5	□□□□□ -0.57
SAMM50-204	ENST00000493161	BTG1	P62324	171 aa		11.5	□□□□□ -0.57
SAMM50-204	ENST00000493161	PAX2	Q02962	417 aa		11.5	□□□□□ -0.57
SAMM50-204	ENST00000493161	CD47	Q08722	323 aa		11.5	□□□□□ -0.57
SAMM50-204	ENST00000493161	CYP51A1	Q16850	503 aa		11.5	□□□□□ -0.57
SAMM50-204	ENST00000493161	TMEM155	Q4W5P6	130 aa		11.5	□□□□□ -0.57
SAMM50-204	ENST00000493161	MTX3	Q5HYI7	312 aa		11.5	□□□□□ -0.57
SAMM50-204	ENST00000493161	FAM27B	Q5VT28	67 aa		11.5	□□□□□ -0.57
SAMM50-204	ENST00000493161	SPIC	Q8N5J4	248 aa		11.5	□□□□□ -0.57
SAMM50-204	ENST00000493161	OR2Z1	Q8NG97	314 aa		11.5	□□□□□ -0.57
SAMM50-204	ENST00000493161	OR52E2	Q8NGJ4	325 aa		11.5	□□□□□ -0.57
SAMM50-204	ENST00000493161	TMIGD2	Q96BF3	282 aa		11.5	□□□□□ -0.57
SAMM50-204	ENST00000493161	C4orf45	Q96LM5	186 aa		11.5	□□□□□ -0.57
SAMM50-204	ENST00000493161	DIRC2	Q96SL1	478 aa		11.5	□□□□□ -0.57
SAMM50-204	ENST00000493161	SLITRK2	Q9H156	845 aa		11.5	□□□□□ -0.57
SAMM50-204	ENST00000493161	NANOG	Q9H9S0	305 aa		11.5	□□□□□ -0.57
SAMM50-204	ENST00000493161	NKIRAS1	Q9NYS0	192 aa		11.5	□□□□□ -0.57
SAMM50-204	ENST00000493161	PDP1	Q9P0J1	537 aa	Predicted RBP	11.5	□□□□□ -0.57
SAMM50-204	ENST00000493161	CMYA5	Q8N3K9	4069 aa		11.5	□□□□□ -0.57
SAMM50-204	ENST00000493161	PRKDC	P78527	4128 aa	Known RBP	11.5	□□□□□ -0.57
SAMM50-204	ENST00000493161	SHOX2	O60902	331 aa	Predicted RBP	11.49	□□□□□ -0.57
SAMM50-204	ENST00000493161	ZNF205	O95201	554 aa		11.49	□□□□□ -0.57
SAMM50-204	ENST00000493161	TSPAN19	P0C672	248 aa		11.49	□□□□□ -0.57
SAMM50-204	ENST00000493161	ERF	P50548	548 aa		11.49	□□□□□ -0.57
SAMM50-204	ENST00000493161	SLC18A1	P54219	525 aa		11.49	□□□□□ -0.57
SAMM50-204	ENST00000493161	TOP3A	Q13472	1001 aa	Predicted RBP	11.49	□□□□□ -0.57
SAMM50-204	ENST00000493161	ENDOG	Q14249	297 aa	Known RBP	11.49	□□□□□ -0.57
SAMM50-204	ENST00000493161	TAF11	Q15544	211 aa		11.49	□□□□□ -0.57
SAMM50-204	ENST00000493161	SPATC1	Q76KD6	591 aa		11.49	□□□□□ -0.57
SAMM50-204	ENST00000493161	PARP8	Q8N3A8	854 aa		11.49	□□□□□ -0.57
SAMM50-204	ENST00000493161	ITLN1	Q8WWA0	313 aa		11.49	□□□□□ -0.57
SAMM50-204	ENST00000493161	SGTB	Q96EQ0	304 aa		11.49	□□□□□ -0.57
SAMM50-204	ENST00000493161	SAMD8	Q96LT4	415 aa		11.49	□□□□□ -0.57
SAMM50-204	ENST00000493161	SMURF2	Q9HAU4	748 aa		11.49	□□□□□ -0.57
SAMM50-204	ENST00000493161	TIMM10B	Q9Y5J6	103 aa		11.49	□□□□□ -0.57
SAMM50-204	ENST00000493161		A0A0G2JK05	382 aa		11.48	□□□□□ -0.57
SAMM50-204	ENST00000493161	CEACAM18	A8MTB9	384 aa		11.48	□□□□□ -0.57
SAMM50-204	ENST00000493161	HOXA3	O43365	443 aa	Predicted RBP	11.48	□□□□□ -0.57
SAMM50-204	ENST00000493161	PIP5K1C	O60331	668 aa		11.48	□□□□□ -0.57
SAMM50-204	ENST00000493161	PLAT	P00750	562 aa		11.48	□□□□□ -0.57
SAMM50-204	ENST00000493161	CST2	P09228	141 aa		11.48	□□□□□ -0.57
SAMM50-204	ENST00000493161	WNT2	P09544	360 aa		11.48	□□□□□ -0.57
SAMM50-204	ENST00000493161	THRB	P10828	461 aa		11.48	□□□□□ -0.57
SAMM50-204	ENST00000493161	FUT4	P22083	530 aa		11.48	□□□□□ -0.57
SAMM50-204	ENST00000493161	ESCO2	Q56NI9	601 aa		11.48	□□□□□ -0.57
SAMM50-204	ENST00000493161	ZMAT1	Q5H9K5	638 aa		11.48	□□□□□ -0.57
SAMM50-204	ENST00000493161	C16orf87	Q6PH81	154 aa		11.48	□□□□□ -0.57
SAMM50-204	ENST00000493161	UNQ6126/PRO20091	Q6UXV3	157 aa		11.48	□□□□□ -0.57
SAMM50-204	ENST00000493161	C9orf139	Q6ZV77	190 aa		11.48	□□□□□ -0.57
SAMM50-204	ENST00000493161	HDDC2	Q7Z4H3	204 aa		11.48	□□□□□ -0.57
SAMM50-204	ENST00000493161	DHDDS	Q86SQ9	333 aa		11.48	□□□□□ -0.57
SAMM50-204	ENST00000493161	IGFN1	Q86VF2	1251 aa		11.48	□□□□□ -0.57
SAMM50-204	ENST00000493161	TLCD1	Q96CP7	247 aa		11.48	□□□□□ -0.57
SAMM50-204	ENST00000493161	CGREF1	Q99674	301 aa		11.48	□□□□□ -0.57
SAMM50-204	ENST00000493161	CCDC28B	Q9BUN5	200 aa		11.48	□□□□□ -0.57
SAMM50-204	ENST00000493161	TXNIP	Q9H3M7	391 aa		11.48	□□□□□ -0.57
SAMM50-204	ENST00000493161	KAT8	Q9H7Z6	458 aa	Known RBP	11.48	□□□□□ -0.57
SAMM50-204	ENST00000493161	TNFRSF19	Q9NS68	423 aa		11.48	□□□□□ -0.57
SAMM50-204	ENST00000493161	CGGBP1	Q9UFW8	167 aa	Predicted RBP	11.48	□□□□□ -0.57
SAMM50-204	ENST00000493161	OR5V1	Q9UGF6	321 aa		11.48	□□□□□ -0.57
SAMM50-204	ENST00000493161	TRAV40	A0A0B4J280	105 aa		11.47	□□□□□ -0.57
SAMM50-204	ENST00000493161		A0A1W2PPL8	197 aa		11.47	□□□□□ -0.57
SAMM50-204	ENST00000493161	TMEM178B	H3BS89	294 aa		11.47	□□□□□ -0.57
SAMM50-204	ENST00000493161		H3BSA7	217 aa		11.47	□□□□□ -0.57
SAMM50-204	ENST00000493161	TGDS	O95455	350 aa		11.47	□□□□□ -0.57
SAMM50-204	ENST00000493161	GZMM	P51124	257 aa		11.47	□□□□□ -0.57
SAMM50-204	ENST00000493161	ARHGDIA	P52565	204 aa		11.47	□□□□□ -0.57
SAMM50-204	ENST00000493161	RELB	Q01201	579 aa		11.47	□□□□□ -0.57
SAMM50-204	ENST00000493161	PIN1	Q13526	163 aa	Predicted RBP	11.47	□□□□□ -0.57
SAMM50-204	ENST00000493161	FOXL2NB	Q6ZUU3	175 aa		11.47	□□□□□ -0.57
SAMM50-204	ENST00000493161	PATL1	Q86TB9	770 aa	Known RBP	11.47	□□□□□ -0.57
SAMM50-204	ENST00000493161	ALDH16A1	Q8IZ83	802 aa		11.47	□□□□□ -0.57
SAMM50-204	ENST00000493161	KIR3DL3	Q8N743	410 aa		11.47	□□□□□ -0.57
SAMM50-204	ENST00000493161	POU5F2	Q8N7G0	328 aa		11.47	□□□□□ -0.57
SAMM50-204	ENST00000493161	OR10A6	Q8NH74	314 aa		11.47	□□□□□ -0.57
SAMM50-204	ENST00000493161	SLC26A7	Q8TE54	656 aa		11.47	□□□□□ -0.57
SAMM50-204	ENST00000493161	TMEM239	Q8WW34	195 aa		11.47	□□□□□ -0.57
SAMM50-204	ENST00000493161	LIPH	Q8WWY8	451 aa		11.47	□□□□□ -0.57

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