RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 LOC100509620A0A075B734 347 aa10.61□□□□□ -0.71
COL6A1-205ENST00000492851 A0A0G2JMP0 313 aa10.61□□□□□ -0.71
COL6A1-205ENST00000492851 A0A0X1KG70 313 aa10.61□□□□□ -0.71
COL6A1-205ENST00000492851 FAM157AC9JC47 383 aa10.61□□□□□ -0.71
COL6A1-205ENST00000492851 J3QLI3 93 aa10.61□□□□□ -0.71
COL6A1-205ENST00000492851 HAX1O00165 279 aa10.61□□□□□ -0.71
COL6A1-205ENST00000492851 PNPP00491 289 aa10.61□□□□□ -0.71
COL6A1-205ENST00000492851 ADH4P08319 380 aa10.61□□□□□ -0.71
COL6A1-205ENST00000492851 MAKP20794 623 aa10.61□□□□□ -0.71
COL6A1-205ENST00000492851 RPL4P36578 427 aaKnown RBP10.61□□□□□ -0.71
COL6A1-205ENST00000492851 MMP15P51511 669 aa10.61□□□□□ -0.71
COL6A1-205ENST00000492851 FMODQ06828 376 aa10.61□□□□□ -0.71
COL6A1-205ENST00000492851 SCRN3Q0VDG4 424 aa10.61□□□□□ -0.71
COL6A1-205ENST00000492851 TSTQ16762 297 aaKnown RBP10.61□□□□□ -0.71
COL6A1-205ENST00000492851 ZBED5Q49AG3 693 aa10.61□□□□□ -0.71
COL6A1-205ENST00000492851 USP51Q70EK9 711 aa10.61□□□□□ -0.71
COL6A1-205ENST00000492851 LRRC75AQ8NAA5 344 aa10.61□□□□□ -0.71
COL6A1-205ENST00000492851 NPEPL1Q8NDH3 523 aa10.61□□□□□ -0.71
COL6A1-205ENST00000492851 OR4M2Q8NGB6 313 aa10.61□□□□□ -0.71
COL6A1-205ENST00000492851 AKR7LQ8NHP1 331 aa10.61□□□□□ -0.71
COL6A1-205ENST00000492851 ABHD4Q8TB40 342 aa10.61□□□□□ -0.71
COL6A1-205ENST00000492851 SLC25A40Q8TBP6 338 aa10.61□□□□□ -0.71
COL6A1-205ENST00000492851 ZNF418Q8TF45 676 aaPredicted RBP10.61□□□□□ -0.71
COL6A1-205ENST00000492851 RCN3Q96D15 328 aa10.61□□□□□ -0.71
COL6A1-205ENST00000492851 C4orf45Q96LM5 186 aa10.61□□□□□ -0.71
COL6A1-205ENST00000492851 JMJD8Q96S16 334 aa10.61□□□□□ -0.71
COL6A1-205ENST00000492851 OR2J1Q9GZK6 312 aa10.61□□□□□ -0.71
COL6A1-205ENST00000492851 METTL17Q9H7H0 456 aaPredicted RBP10.61□□□□□ -0.71
COL6A1-205ENST00000492851 KRCC1Q9NPI7 259 aaPredicted RBP10.61□□□□□ -0.71
COL6A1-205ENST00000492851 TBCCD1Q9NVR7 557 aa10.61□□□□□ -0.71
COL6A1-205ENST00000492851 CMTM6Q9NX76 183 aa10.61□□□□□ -0.71
COL6A1-205ENST00000492851 KLHL21Q9UJP4 597 aa10.61□□□□□ -0.71
COL6A1-205ENST00000492851 RPS6KA6Q9UK32 745 aa10.61□□□□□ -0.71
COL6A1-205ENST00000492851 FAM32AQ9Y421 112 aaKnown RBP10.61□□□□□ -0.71
COL6A1-205ENST00000492851 A0A087WUU8 490 aa10.6□□□□□ -0.71
COL6A1-205ENST00000492851 IGKV1D-43A0A0B4J1Z2 117 aa10.6□□□□□ -0.71
COL6A1-205ENST00000492851 A0A1W2PPL8 197 aa10.6□□□□□ -0.71
COL6A1-205ENST00000492851 SPRY3O43610 288 aa10.6□□□□□ -0.71
COL6A1-205ENST00000492851 PIP5K1CO60331 668 aa10.6□□□□□ -0.71
COL6A1-205ENST00000492851 GMNNO75496 209 aa10.6□□□□□ -0.71
COL6A1-205ENST00000492851 MPZL1O95297 269 aa10.6□□□□□ -0.71
COL6A1-205ENST00000492851 IGHV1-46P01743 117 aa10.6□□□□□ -0.71
COL6A1-205ENST00000492851 CD14P08571 375 aa10.6□□□□□ -0.71
COL6A1-205ENST00000492851 COX4I1P13073 169 aa10.6□□□□□ -0.71
COL6A1-205ENST00000492851 GSTM3P21266 225 aa10.6□□□□□ -0.71
COL6A1-205ENST00000492851 TNFSF4P23510 183 aa10.6□□□□□ -0.71
COL6A1-205ENST00000492851 WNT5AP41221 380 aa10.6□□□□□ -0.71
COL6A1-205ENST00000492851 YAP1P46937 504 aaKnown RBP10.6□□□□□ -0.71
COL6A1-205ENST00000492851 PPP1CBP62140 327 aa10.6□□□□□ -0.71
COL6A1-205ENST00000492851 MVKQ03426 396 aa10.6□□□□□ -0.71
COL6A1-205ENST00000492851 GPR139Q6DWJ6 353 aa10.6□□□□□ -0.71
COL6A1-205ENST00000492851 CGB2Q6NT52 195 aa10.6□□□□□ -0.71
COL6A1-205ENST00000492851 HACD2Q6Y1H2 254 aa10.6□□□□□ -0.71
COL6A1-205ENST00000492851 VTCN1Q7Z7D3 282 aa10.6□□□□□ -0.71
COL6A1-205ENST00000492851 ZNF101Q8IZC7 436 aa10.6□□□□□ -0.71
COL6A1-205ENST00000492851 IPCEF1Q8WWN9 437 aaPredicted RBP10.6□□□□□ -0.71
COL6A1-205ENST00000492851 CCL17Q92583 94 aa10.6□□□□□ -0.71
COL6A1-205ENST00000492851 CMTM5Q96DZ9 223 aa10.6□□□□□ -0.71
COL6A1-205ENST00000492851 WNT5BQ9H1J7 359 aa10.6□□□□□ -0.71
COL6A1-205ENST00000492851 NMNAT1Q9HAN9 279 aaPredicted RBP10.6□□□□□ -0.71
COL6A1-205ENST00000492851 LPAR2Q9HBW0 351 aa10.6□□□□□ -0.71
COL6A1-205ENST00000492851 MED4Q9NPJ6 270 aa10.6□□□□□ -0.71
COL6A1-205ENST00000492851 MAN2C1Q9NTJ4 1040 aa10.6□□□□□ -0.71
COL6A1-205ENST00000492851 ARMCX1Q9P291 453 aa10.6□□□□□ -0.71
COL6A1-205ENST00000492851 RHCGQ9UBD6 479 aa10.6□□□□□ -0.71
COL6A1-205ENST00000492851 TRAV27A0A087WT01 109 aa10.59□□□□□ -0.71
COL6A1-205ENST00000492851 FFAR1O14842 300 aa10.59□□□□□ -0.71
COL6A1-205ENST00000492851 WNT9BO14905 357 aa10.59□□□□□ -0.71
COL6A1-205ENST00000492851 SURF4O15260 269 aa10.59□□□□□ -0.71
COL6A1-205ENST00000492851 ABHD16AO95870 558 aa10.59□□□□□ -0.71
COL6A1-205ENST00000492851 SERPINA1P01009 418 aa10.59□□□□□ -0.71
COL6A1-205ENST00000492851 CD55P08174 381 aa10.59□□□□□ -0.71
COL6A1-205ENST00000492851 ITGA2P17301 1181 aa10.59□□□□□ -0.71
COL6A1-205ENST00000492851 TNFRSF1AP19438 455 aa10.59□□□□□ -0.71
COL6A1-205ENST00000492851 LSM6P62312 80 aaKnown RBP10.59□□□□□ -0.71
COL6A1-205ENST00000492851 GUCY1A3Q02108 690 aa10.59□□□□□ -0.71
COL6A1-205ENST00000492851 GLO1Q04760 184 aa10.59□□□□□ -0.71
COL6A1-205ENST00000492851 SF3A3Q12874 501 aaKnown RBP eCLIP10.59□□□□□ -0.71
COL6A1-205ENST00000492851 MTX3Q5HYI7 312 aa10.59□□□□□ -0.71
COL6A1-205ENST00000492851 USP43Q70EL4 1123 aa10.59□□□□□ -0.71
COL6A1-205ENST00000492851 IGFN1Q86VF2 1251 aa10.59□□□□□ -0.71
COL6A1-205ENST00000492851 POU5F2Q8N7G0 328 aa10.59□□□□□ -0.71
COL6A1-205ENST00000492851 FAM162AQ96A26 154 aa10.59□□□□□ -0.71
COL6A1-205ENST00000492851 POLE4Q9NR33 117 aa10.59□□□□□ -0.71
COL6A1-205ENST00000492851 WIPI2Q9Y4P8 454 aa10.59□□□□□ -0.71
COL6A1-205ENST00000492851 SNX13Q9Y5W8 968 aa10.59□□□□□ -0.71
COL6A1-205ENST00000492851 ENPP4Q9Y6X5 453 aa10.59□□□□□ -0.71
COL6A1-205ENST00000492851 MALRD1Q5VYJ5 2156 aa10.58□□□□□ -0.72
COL6A1-205ENST00000492851 A0A1W2PRQ8 180 aa10.58□□□□□ -0.72
COL6A1-205ENST00000492851 PRSS37A4D1T9 235 aa10.58□□□□□ -0.72
COL6A1-205ENST00000492851 J3KTA2 159 aa10.58□□□□□ -0.72
COL6A1-205ENST00000492851 J3QW42 95 aa10.58□□□□□ -0.72
COL6A1-205ENST00000492851 PLPP2O43688 288 aa10.58□□□□□ -0.72
COL6A1-205ENST00000492851 TIMM8AO60220 97 aaPredicted RBP10.58□□□□□ -0.72
COL6A1-205ENST00000492851 UBOX5O94941 541 aa10.58□□□□□ -0.72
COL6A1-205ENST00000492851 NDUFB2O95178 105 aa10.58□□□□□ -0.72
COL6A1-205ENST00000492851 IGHV2-5P01817 119 aa10.58□□□□□ -0.72
COL6A1-205ENST00000492851 H1F0P07305 194 aaKnown RBP10.58□□□□□ -0.72
COL6A1-205ENST00000492851 RHCEP18577 417 aa10.58□□□□□ -0.72
COL6A1-205ENST00000492851 CPT2P23786 658 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms