RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 ATG5Q9H1Y0 275 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 EMC7Q9NPA0 242 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 TMA7Q9Y2S6 64 aaKnown RBP11.14□□□□□ -0.63
HMGN1-220ENST00000492280 MRPS18BQ9Y676 258 aaKnown RBP11.14□□□□□ -0.63
HMGN1-220ENST00000492280 TMEM272A0A1B0GTI8 110 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 CTDSPLO15194 276 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 RLN1P04808 185 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 ZNF28P17035 718 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 EMP2P54851 167 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 RASGEF1BQ0VAM2 473 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 DYRK1AQ13627 763 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 GFOD2Q3B7J2 385 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 CD276Q5ZPR3 534 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 TMEM225Q6GV28 225 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 TMEM71Q6P5X7 295 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 WDR74Q6RFH5 385 aaPredicted RBP11.14□□□□□ -0.63
HMGN1-220ENST00000492280 PLPP5Q8NEB5 264 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 MAFAQ8NHW3 353 aaPredicted RBP11.14□□□□□ -0.63
HMGN1-220ENST00000492280 ASB10Q8WXI3 467 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 CMBLQ96DG6 245 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 CMKLR1Q99788 373 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 C12orf10Q9HB07 376 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 VSX1Q9NZR4 365 aaPredicted RBP11.14□□□□□ -0.63
HMGN1-220ENST00000492280 MGAT4CQ9UBM8 478 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 CDV3Q9UKY7 258 aaKnown RBP11.14□□□□□ -0.63
HMGN1-220ENST00000492280 ING4Q9UNL4 249 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 GGT3PA6NGU5 568 aa11.13□□□□□ -0.63
HMGN1-220ENST00000492280 SULT1A3P0DMM9 295 aa11.13□□□□□ -0.63
HMGN1-220ENST00000492280 SULT1A4P0DMN0 295 aa11.13□□□□□ -0.63
HMGN1-220ENST00000492280 EPHA8P29322 1005 aaPredicted RBP11.13□□□□□ -0.63
HMGN1-220ENST00000492280 HSF1Q00613 529 aa11.13□□□□□ -0.63
HMGN1-220ENST00000492280 CSRP2Q16527 193 aa11.13□□□□□ -0.63
HMGN1-220ENST00000492280 WDR45BQ5MNZ6 344 aa11.13□□□□□ -0.63
HMGN1-220ENST00000492280 LIX1LQ8IVB5 337 aa11.13□□□□□ -0.63
HMGN1-220ENST00000492280 SLC26A10Q8NG04 563 aa11.13□□□□□ -0.63
HMGN1-220ENST00000492280 OR13C3Q8NGS6 347 aa11.13□□□□□ -0.63
HMGN1-220ENST00000492280 SLC39A7Q92504 469 aa11.13□□□□□ -0.63
HMGN1-220ENST00000492280 SPSB2Q99619 263 aa11.13□□□□□ -0.63
HMGN1-220ENST00000492280 MFRPQ9BY79 579 aa11.13□□□□□ -0.63
HMGN1-220ENST00000492280 SMOC1Q9H4F8 434 aa11.13□□□□□ -0.63
HMGN1-220ENST00000492280 METTL7AQ9H8H3 244 aa11.13□□□□□ -0.63
HMGN1-220ENST00000492280 PPP4R1LQ9P1A2 415 aa11.13□□□□□ -0.63
HMGN1-220ENST00000492280 PPIEQ9UNP9 301 aaKnown RBP11.13□□□□□ -0.63
HMGN1-220ENST00000492280 COLQQ9Y215 455 aaPredicted RBP11.13□□□□□ -0.63
HMGN1-220ENST00000492280 LOC100509620A0A075B734 347 aa11.13□□□□□ -0.63
HMGN1-220ENST00000492280 A0A1W2PPL8 197 aa11.13□□□□□ -0.63
HMGN1-220ENST00000492280 M0QYG6 137 aa11.13□□□□□ -0.63
HMGN1-220ENST00000492280 ACOT7O00154 380 aa11.13□□□□□ -0.63
HMGN1-220ENST00000492280 CD3DP04234 171 aa11.13□□□□□ -0.63
HMGN1-220ENST00000492280 VSIG10L2P0DP72 767 aa11.13□□□□□ -0.63
HMGN1-220ENST00000492280 CALCBP10092 127 aa11.13□□□□□ -0.63
HMGN1-220ENST00000492280 GTF2F2P13984 249 aa11.13□□□□□ -0.63
HMGN1-220ENST00000492280 BLVRAP53004 296 aa11.13□□□□□ -0.63
HMGN1-220ENST00000492280 RAB11BQ15907 218 aa11.13□□□□□ -0.63
HMGN1-220ENST00000492280 LGALSLQ3ZCW2 172 aaPredicted RBP11.13□□□□□ -0.63
HMGN1-220ENST00000492280 FAM198BQ6UWH4 519 aa11.13□□□□□ -0.63
HMGN1-220ENST00000492280 NUP54Q7Z3B4 507 aa11.13□□□□□ -0.63
HMGN1-220ENST00000492280 LUZP2Q86TE4 346 aa11.13□□□□□ -0.63
HMGN1-220ENST00000492280 OR51S1Q8NGJ8 323 aa11.13□□□□□ -0.63
HMGN1-220ENST00000492280 PHYHIPQ92561 330 aa11.13□□□□□ -0.63
HMGN1-220ENST00000492280 SEC61A2Q9H9S3 476 aa11.13□□□□□ -0.63
HMGN1-220ENST00000492280 RARRES3Q9UL19 164 aa11.13□□□□□ -0.63
HMGN1-220ENST00000492280 MEIKINA0A087WXM9 373 aa11.12□□□□□ -0.63
HMGN1-220ENST00000492280 TMEM269A0A1B0GVZ9 245 aa11.12□□□□□ -0.63
HMGN1-220ENST00000492280 MPC2O95563 127 aa11.12□□□□□ -0.63
HMGN1-220ENST00000492280 CFDP00746 253 aaPredicted RBP11.12□□□□□ -0.63
HMGN1-220ENST00000492280 ZNF823P16415 610 aa11.12□□□□□ -0.63
HMGN1-220ENST00000492280 ENPP1P22413 925 aa11.12□□□□□ -0.63
HMGN1-220ENST00000492280 MYBPHQ13203 477 aa11.12□□□□□ -0.63
HMGN1-220ENST00000492280 LPAL2Q16609 132 aa11.12□□□□□ -0.63
HMGN1-220ENST00000492280 HACD4Q5VWC8 232 aa11.12□□□□□ -0.63
HMGN1-220ENST00000492280 LYSMD4Q5XG99 296 aa11.12□□□□□ -0.63
HMGN1-220ENST00000492280 BAIAP2L2Q6UXY1 529 aa11.12□□□□□ -0.63
HMGN1-220ENST00000492280 C17orf107Q6ZR85 190 aa11.12□□□□□ -0.63
HMGN1-220ENST00000492280 CATSPERDQ86XM0 798 aa11.12□□□□□ -0.63
HMGN1-220ENST00000492280 OR8H3Q8N146 312 aa11.12□□□□□ -0.63
HMGN1-220ENST00000492280 FTMTQ8N4E7 242 aa11.12□□□□□ -0.63
HMGN1-220ENST00000492280 ACBD4Q8NC06 268 aa11.12□□□□□ -0.63
HMGN1-220ENST00000492280 ZNF248Q8NDW4 579 aa11.12□□□□□ -0.63
HMGN1-220ENST00000492280 HGDQ93099 445 aa11.12□□□□□ -0.63
HMGN1-220ENST00000492280 CDX2Q99626 313 aaPredicted RBP11.12□□□□□ -0.63
HMGN1-220ENST00000492280 GINS4Q9BRT9 223 aa11.12□□□□□ -0.63
HMGN1-220ENST00000492280 CHST6Q9GZX3 395 aa11.12□□□□□ -0.63
HMGN1-220ENST00000492280 PRO3102Q9H379 93 aa11.12□□□□□ -0.63
HMGN1-220ENST00000492280 LAMA5O15230 3695 aa11.12□□□□□ -0.63
HMGN1-220ENST00000492280 SPENQ96T58 3664 aaKnown RBP11.12□□□□□ -0.63
HMGN1-220ENST00000492280 A0A1B0GVI7 797 aa11.12□□□□□ -0.63
HMGN1-220ENST00000492280 ANKUB1A6NFN9 424 aa11.12□□□□□ -0.63
HMGN1-220ENST00000492280 RAB40ALP0C0E4 278 aa11.12□□□□□ -0.63
HMGN1-220ENST00000492280 PRKXP51817 358 aa11.12□□□□□ -0.63
HMGN1-220ENST00000492280 POU4F3Q15319 338 aa11.12□□□□□ -0.63
HMGN1-220ENST00000492280 HLA-BQ31612 363 aa11.12□□□□□ -0.63
HMGN1-220ENST00000492280 ZNF782Q6ZMW2 699 aaPredicted RBP11.12□□□□□ -0.63
HMGN1-220ENST00000492280 POC1BQ8TC44 478 aa11.12□□□□□ -0.63
HMGN1-220ENST00000492280 ST7LQ8TDW4 575 aa11.12□□□□□ -0.63
HMGN1-220ENST00000492280 RAB40AQ8WXH6 277 aa11.12□□□□□ -0.63
HMGN1-220ENST00000492280 DOCK7Q96N67 2140 aa11.12□□□□□ -0.63
HMGN1-220ENST00000492280 OR5B2Q96R09 309 aa11.12□□□□□ -0.63
HMGN1-220ENST00000492280 ZNF436Q9C0F3 470 aaPredicted RBP11.12□□□□□ -0.63
HMGN1-220ENST00000492280 PLEKHA1Q9HB21 404 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms