RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 PRELID2Q8N945 189 aa2.3□□□□□ -2.04
CD46-216ENST00000490278 OR2A1Q8NGT9 310 aa2.3□□□□□ -2.04
CD46-216ENST00000490278 FRZBQ92765 325 aa2.3□□□□□ -2.04
CD46-216ENST00000490278 SEH1LQ96EE3 360 aa2.3□□□□□ -2.04
CD46-216ENST00000490278 DUS3LQ96G46 650 aaKnown RBP2.3□□□□□ -2.04
CD46-216ENST00000490278 ZNF681Q96N22 645 aa2.3□□□□□ -2.04
CD46-216ENST00000490278 SYNDIG1Q9H7V2 258 aa2.3□□□□□ -2.04
CD46-216ENST00000490278 HMG20AQ9NP66 347 aa2.3□□□□□ -2.04
CD46-216ENST00000490278 HRASLS2Q9NWW9 162 aa2.3□□□□□ -2.04
CD46-216ENST00000490278 LGALS13Q9UHV8 139 aa2.3□□□□□ -2.04
CD46-216ENST00000490278 PITPNC1Q9UKF7 332 aa2.3□□□□□ -2.04
CD46-216ENST00000490278 KCNE3Q9Y6H6 103 aa2.3□□□□□ -2.04
CD46-216ENST00000490278 IGSF9BQ9UPX0 1349 aa2.3□□□□□ -2.04
CD46-216ENST00000490278 TRBV11-1A0A0K0K1C0 115 aa2.29□□□□□ -2.04
CD46-216ENST00000490278 SIRPB1O00241 398 aa2.29□□□□□ -2.04
CD46-216ENST00000490278 KLHL41O60662 606 aa2.29□□□□□ -2.04
CD46-216ENST00000490278 RP2O75695 350 aa2.29□□□□□ -2.04
CD46-216ENST00000490278 FTH1P02794 183 aa2.29□□□□□ -2.04
CD46-216ENST00000490278 PABPC4LP0CB38 370 aaKnown RBP2.29□□□□□ -2.04
CD46-216ENST00000490278 WARSP23381 471 aaKnown RBP2.29□□□□□ -2.04
CD46-216ENST00000490278 DCKP27707 260 aa2.29□□□□□ -2.04
CD46-216ENST00000490278 GPX4P36969 197 aaPredicted RBP2.29□□□□□ -2.04
CD46-216ENST00000490278 SLC1A1P43005 524 aa2.29□□□□□ -2.04
CD46-216ENST00000490278 CSNK1EP49674 416 aaKnown RBP2.29□□□□□ -2.04
CD46-216ENST00000490278 RAB10P61026 200 aa2.29□□□□□ -2.04
CD46-216ENST00000490278 SYCNQ0VAF6 134 aa2.29□□□□□ -2.04
CD46-216ENST00000490278 IDI1Q13907 227 aa2.29□□□□□ -2.04
CD46-216ENST00000490278 PON2Q15165 354 aa2.29□□□□□ -2.04
CD46-216ENST00000490278 RGNQ15493 299 aa2.29□□□□□ -2.04
CD46-216ENST00000490278 OR7A5Q15622 319 aa2.29□□□□□ -2.04
CD46-216ENST00000490278 STK11Q15831 433 aa2.29□□□□□ -2.04
CD46-216ENST00000490278 MRPL23Q16540 153 aaKnown RBP2.29□□□□□ -2.04
CD46-216ENST00000490278 ABCA11PQ4W5N1 156 aa2.29□□□□□ -2.04
CD46-216ENST00000490278 PPM1LQ5SGD2 360 aa2.29□□□□□ -2.04
CD46-216ENST00000490278 PRAMEF20Q5VT98 475 aa2.29□□□□□ -2.04
CD46-216ENST00000490278 CARD17Q5XLA6 110 aa2.29□□□□□ -2.04
CD46-216ENST00000490278 FBXW9Q5XUX1 488 aa2.29□□□□□ -2.04
CD46-216ENST00000490278 REEP3Q6NUK4 255 aa2.29□□□□□ -2.04
CD46-216ENST00000490278 CEMP1Q6PRD7 247 aaPredicted RBP2.29□□□□□ -2.04
CD46-216ENST00000490278 SLC16A14Q7RTX9 510 aa2.29□□□□□ -2.04
CD46-216ENST00000490278 RIMKLAQ8IXN7 391 aa2.29□□□□□ -2.04
CD46-216ENST00000490278 IQCKQ8N0W5 287 aa2.29□□□□□ -2.04
CD46-216ENST00000490278 GTPBP8Q8N3Z3 284 aaPredicted RBP2.29□□□□□ -2.04
CD46-216ENST00000490278 SYNPRQ8TBG9 265 aa2.29□□□□□ -2.04
CD46-216ENST00000490278 DNAJC1Q96KC8 554 aaKnown RBP2.29□□□□□ -2.04
CD46-216ENST00000490278 OR5B12Q96R08 314 aa2.29□□□□□ -2.04
CD46-216ENST00000490278 MYCBPQ99417 103 aaPredicted RBP2.29□□□□□ -2.04
CD46-216ENST00000490278 SPIN2AQ99865 258 aa2.29□□□□□ -2.04
CD46-216ENST00000490278 SPIN2BQ9BPZ2 258 aa2.29□□□□□ -2.04
CD46-216ENST00000490278 UBE2ZQ9H832 354 aaPredicted RBP2.29□□□□□ -2.04
CD46-216ENST00000490278 ANKRA2Q9H9E1 313 aa2.29□□□□□ -2.04
CD46-216ENST00000490278 C12orf10Q9HB07 376 aa2.29□□□□□ -2.04
CD46-216ENST00000490278 ZNF355PQ9NSJ1 428 aa2.29□□□□□ -2.04
CD46-216ENST00000490278 ZNRD1Q9P1U0 126 aa2.29□□□□□ -2.04
CD46-216ENST00000490278 CTSFQ9UBX1 484 aa2.29□□□□□ -2.04
CD46-216ENST00000490278 TMEM150BA6NC51 233 aa2.28□□□□□ -2.04
CD46-216ENST00000490278 TRIM64CA6NLI5 447 aa2.28□□□□□ -2.04
CD46-216ENST00000490278 ZNF705GA8MUZ8 300 aaPredicted RBP2.28□□□□□ -2.04
CD46-216ENST00000490278 LSM1O15116 133 aaKnown RBP2.28□□□□□ -2.04
CD46-216ENST00000490278 NUPL2O15504 423 aaKnown RBP2.28□□□□□ -2.04
CD46-216ENST00000490278 ERLIN1O75477 346 aa2.28□□□□□ -2.04
CD46-216ENST00000490278 VAMP5O95183 116 aa2.28□□□□□ -2.04
CD46-216ENST00000490278 KRT14P02533 472 aa2.28□□□□□ -2.04
CD46-216ENST00000490278 ACSM4P0C7M7 580 aa2.28□□□□□ -2.04
CD46-216ENST00000490278 OTX1P32242 354 aaPredicted RBP2.28□□□□□ -2.04
CD46-216ENST00000490278 CEACAM3P40198 252 aa2.28□□□□□ -2.04
CD46-216ENST00000490278 PMELP40967 661 aa2.28□□□□□ -2.04
CD46-216ENST00000490278 RND2P52198 227 aa2.28□□□□□ -2.04
CD46-216ENST00000490278 VSX2P58304 361 aaPredicted RBP2.28□□□□□ -2.04
CD46-216ENST00000490278 HSP90AB3PQ58FF7 597 aa2.28□□□□□ -2.04
CD46-216ENST00000490278 SOHLH1Q5JUK2 328 aa2.28□□□□□ -2.04
CD46-216ENST00000490278 Q5W150 140 aa2.28□□□□□ -2.04
CD46-216ENST00000490278 LRRC66Q68CR7 880 aa2.28□□□□□ -2.04
CD46-216ENST00000490278 C22orf42Q6IC83 251 aa2.28□□□□□ -2.04
CD46-216ENST00000490278 PLET1Q6UQ28 207 aa2.28□□□□□ -2.04
CD46-216ENST00000490278 FBXW12Q6X9E4 464 aa2.28□□□□□ -2.04
CD46-216ENST00000490278 TMEM150AQ86TG1 271 aa2.28□□□□□ -2.04
CD46-216ENST00000490278 UBALD2Q8IYN6 164 aa2.28□□□□□ -2.04
CD46-216ENST00000490278 OR4C5Q8NGB2 326 aa2.28□□□□□ -2.04
CD46-216ENST00000490278 OR4A4PQ8NGN8 299 aa2.28□□□□□ -2.04
CD46-216ENST00000490278 NTAN1Q96AB6 310 aa2.28□□□□□ -2.04
CD46-216ENST00000490278 GALNT14Q96FL9 552 aa2.28□□□□□ -2.04
CD46-216ENST00000490278 SAV1Q9H4B6 383 aaPredicted RBP2.28□□□□□ -2.04
CD46-216ENST00000490278 GPATCH2LQ9NWQ4 482 aa2.28□□□□□ -2.04
CD46-216ENST00000490278 ZNF282Q9UDV7 671 aaPredicted RBP2.28□□□□□ -2.04
CD46-216ENST00000490278 OPN4Q9UHM6 478 aa2.28□□□□□ -2.04
CD46-216ENST00000490278 TMEM14AQ9Y6G1 99 aa2.28□□□□□ -2.04
CD46-216ENST00000490278 GPATCH8Q9UKJ3 1502 aaKnown RBP2.27□□□□□ -2.05
CD46-216ENST00000490278 CTAGE15A4D2H0 777 aa2.27□□□□□ -2.05
CD46-216ENST00000490278 OR2AG2A6NM03 316 aa2.27□□□□□ -2.05
CD46-216ENST00000490278 LYRM9A8MSI8 78 aa2.27□□□□□ -2.05
CD46-216ENST00000490278 TCP11X1B4DZS4 312 aa2.27□□□□□ -2.05
CD46-216ENST00000490278 NDUFAB1O14561 156 aa2.27□□□□□ -2.05
CD46-216ENST00000490278 FKBP6O75344 327 aa2.27□□□□□ -2.05
CD46-216ENST00000490278 AGTP01019 485 aa2.27□□□□□ -2.05
CD46-216ENST00000490278 ADRA2AP08913 450 aa2.27□□□□□ -2.05
CD46-216ENST00000490278 UBTFL6P0CB48 400 aaPredicted RBP2.27□□□□□ -2.05
CD46-216ENST00000490278 CX3CR1P49238 355 aa2.27□□□□□ -2.05
CD46-216ENST00000490278 STXBP1P61764 594 aaKnown RBP2.27□□□□□ -2.05
CD46-216ENST00000490278 TGM3Q08188 693 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms