RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 SLC35F2Q8IXU6 374 aa11.72□□□□□ -0.53
TRAIP-210ENST00000489948 CCDC36Q8IYA8 594 aa11.72□□□□□ -0.53
TRAIP-210ENST00000489948 ACBD7Q8N6N7 88 aa11.72□□□□□ -0.53
TRAIP-210ENST00000489948 OR4F15Q8NGB8 312 aa11.72□□□□□ -0.53
TRAIP-210ENST00000489948 OR6N2Q8NGY6 317 aa11.72□□□□□ -0.53
TRAIP-210ENST00000489948 TMEM80Q96HE8 168 aa11.72□□□□□ -0.53
TRAIP-210ENST00000489948 USB1Q9BQ65 265 aaKnown RBP11.72□□□□□ -0.53
TRAIP-210ENST00000489948 CDCA4Q9BXL8 241 aa11.72□□□□□ -0.53
TRAIP-210ENST00000489948 SEC61A2Q9H9S3 476 aa11.72□□□□□ -0.53
TRAIP-210ENST00000489948 ELOVL5Q9NYP7 299 aa11.72□□□□□ -0.53
TRAIP-210ENST00000489948 EXOSC1Q9Y3B2 195 aaKnown RBP11.72□□□□□ -0.53
TRAIP-210ENST00000489948 LHFPL6Q9Y693 200 aa11.72□□□□□ -0.53
TRAIP-210ENST00000489948 DIDO1Q9BTC0 2240 aaKnown RBP11.71□□□□□ -0.53
TRAIP-210ENST00000489948 ARPC4-TTLL3A0A0A6YYG9 625 aa11.71□□□□□ -0.53
TRAIP-210ENST00000489948 TRIM64CA6NLI5 447 aa11.71□□□□□ -0.53
TRAIP-210ENST00000489948 C12orf71A8MTZ7 269 aa11.71□□□□□ -0.53
TRAIP-210ENST00000489948 EEF1E1-BLOC1S5C9J1V9 151 aa11.71□□□□□ -0.53
TRAIP-210ENST00000489948 EEF1E1O43324 174 aaKnown RBP11.71□□□□□ -0.53
TRAIP-210ENST00000489948 RGS10O43665 173 aa11.71□□□□□ -0.53
TRAIP-210ENST00000489948 TMCC2O75069 709 aa11.71□□□□□ -0.53
TRAIP-210ENST00000489948 MPZL1O95297 269 aa11.71□□□□□ -0.53
TRAIP-210ENST00000489948 LYNP07948 512 aa11.71□□□□□ -0.53
TRAIP-210ENST00000489948 HTR1AP08908 422 aa11.71□□□□□ -0.53
TRAIP-210ENST00000489948 MRPL3P09001 348 aaKnown RBP11.71□□□□□ -0.53
TRAIP-210ENST00000489948 PSKH1P11801 424 aa11.71□□□□□ -0.53
TRAIP-210ENST00000489948 ATP6V1E1P36543 226 aa11.71□□□□□ -0.53
TRAIP-210ENST00000489948 FOXG1P55316 489 aaPredicted RBP11.71□□□□□ -0.53
TRAIP-210ENST00000489948 HIST1H3AP68431 136 aa11.71□□□□□ -0.53
TRAIP-210ENST00000489948 GABRA6Q16445 453 aa11.71□□□□□ -0.53
TRAIP-210ENST00000489948 MEP1BQ16820 701 aa11.71□□□□□ -0.53
TRAIP-210ENST00000489948 SFRP5Q5T4F7 317 aa11.71□□□□□ -0.53
TRAIP-210ENST00000489948 HIST2H3PS2Q5TEC6 136 aa11.71□□□□□ -0.53
TRAIP-210ENST00000489948 SLC18B1Q6NT16 456 aa11.71□□□□□ -0.53
TRAIP-210ENST00000489948 ZNF773Q6PK81 442 aa11.71□□□□□ -0.53
TRAIP-210ENST00000489948 KLHL24Q6TFL4 600 aa11.71□□□□□ -0.53
TRAIP-210ENST00000489948 HIST2H3AQ71DI3 136 aa11.71□□□□□ -0.53
TRAIP-210ENST00000489948 RHOUQ7L0Q8 258 aa11.71□□□□□ -0.53
TRAIP-210ENST00000489948 DPY19L4Q7Z388 723 aa11.71□□□□□ -0.53
TRAIP-210ENST00000489948 STX19Q8N4C7 294 aa11.71□□□□□ -0.53
TRAIP-210ENST00000489948 PRR7Q8TB68 274 aa11.71□□□□□ -0.53
TRAIP-210ENST00000489948 ASB17Q8WXJ9 295 aa11.71□□□□□ -0.53
TRAIP-210ENST00000489948 BCL2L2Q92843 193 aaPredicted RBP11.71□□□□□ -0.53
TRAIP-210ENST00000489948 FOXN4Q96NZ1 517 aa11.71□□□□□ -0.53
TRAIP-210ENST00000489948 MYCBPQ99417 103 aaPredicted RBP11.71□□□□□ -0.53
TRAIP-210ENST00000489948 ZNF649Q9BS31 505 aa11.71□□□□□ -0.53
TRAIP-210ENST00000489948 ZNF416Q9BWM5 594 aa11.71□□□□□ -0.53
TRAIP-210ENST00000489948 HDHD5Q9BXW7 423 aa11.71□□□□□ -0.53
TRAIP-210ENST00000489948 EMC7Q9NPA0 242 aa11.71□□□□□ -0.53
TRAIP-210ENST00000489948 OBP2BQ9NPH6 170 aa11.71□□□□□ -0.53
TRAIP-210ENST00000489948 ATPIF1Q9UII2 106 aa11.71□□□□□ -0.53
TRAIP-210ENST00000489948 ERRFI1Q9UJM3 462 aaPredicted RBP11.71□□□□□ -0.53
TRAIP-210ENST00000489948 SLC5A6Q9Y289 635 aa11.71□□□□□ -0.53
TRAIP-210ENST00000489948 TMEM129A0AVI4 362 aa11.7□□□□□ -0.54
TRAIP-210ENST00000489948 ZNF593O00488 134 aaPredicted RBP11.7□□□□□ -0.54
TRAIP-210ENST00000489948 APOL3O95236 402 aa11.7□□□□□ -0.54
TRAIP-210ENST00000489948 ADRA2AP08913 450 aa11.7□□□□□ -0.54
TRAIP-210ENST00000489948 SPARCP09486 303 aa11.7□□□□□ -0.54
TRAIP-210ENST00000489948 MYL12AP19105 171 aa11.7□□□□□ -0.54
TRAIP-210ENST00000489948 ALOX5APP20292 161 aa11.7□□□□□ -0.54
TRAIP-210ENST00000489948 PAX7P23759 505 aa11.7□□□□□ -0.54
TRAIP-210ENST00000489948 PCBD1P61457 104 aa11.7□□□□□ -0.54
TRAIP-210ENST00000489948 ACTA2P62736 377 aa11.7□□□□□ -0.54
TRAIP-210ENST00000489948 ACTG2P63267 376 aa11.7□□□□□ -0.54
TRAIP-210ENST00000489948 EGR3Q06889 387 aa11.7□□□□□ -0.54
TRAIP-210ENST00000489948 SCRN3Q0VDG4 424 aa11.7□□□□□ -0.54
TRAIP-210ENST00000489948 IRF3Q14653 427 aa11.7□□□□□ -0.54
TRAIP-210ENST00000489948 TBCEQ15813 527 aaPredicted RBP11.7□□□□□ -0.54
TRAIP-210ENST00000489948 SGCAQ16586 387 aa11.7□□□□□ -0.54
TRAIP-210ENST00000489948 TBRG1Q3YBR2 411 aa11.7□□□□□ -0.54
TRAIP-210ENST00000489948 STAC2Q6ZMT1 411 aa11.7□□□□□ -0.54
TRAIP-210ENST00000489948 SSX8Q7RTT4 187 aa11.7□□□□□ -0.54
TRAIP-210ENST00000489948 LUZP2Q86TE4 346 aa11.7□□□□□ -0.54
TRAIP-210ENST00000489948 CXorf67Q86X51 503 aaPredicted RBP11.7□□□□□ -0.54
TRAIP-210ENST00000489948 OR10H4Q8NGA5 316 aa11.7□□□□□ -0.54
TRAIP-210ENST00000489948 LILRB4Q8NHJ6 448 aa11.7□□□□□ -0.54
TRAIP-210ENST00000489948 ST7LQ8TDW4 575 aa11.7□□□□□ -0.54
TRAIP-210ENST00000489948 NANOS1Q8WY41 292 aaKnown RBP11.7□□□□□ -0.54
TRAIP-210ENST00000489948 SGCDQ92629 289 aa11.7□□□□□ -0.54
TRAIP-210ENST00000489948 MRPL48Q96GC5 212 aaKnown RBP11.7□□□□□ -0.54
TRAIP-210ENST00000489948 MOV10Q9HCE1 1003 aaKnown RBP11.7□□□□□ -0.54
TRAIP-210ENST00000489948 GALNT8Q9NY28 637 aa11.7□□□□□ -0.54
TRAIP-210ENST00000489948 ZNF224Q9NZL3 707 aa11.7□□□□□ -0.54
TRAIP-210ENST00000489948 ASH2LQ9UBL3 628 aa11.7□□□□□ -0.54
TRAIP-210ENST00000489948 LAMP5Q9UJQ1 280 aa11.7□□□□□ -0.54
TRAIP-210ENST00000489948 GDF2Q9UK05 429 aaPredicted RBP11.7□□□□□ -0.54
TRAIP-210ENST00000489948 COPS3Q9UNS2 423 aa11.7□□□□□ -0.54
TRAIP-210ENST00000489948 POLR1DQ9Y2S0 133 aa11.7□□□□□ -0.54
TRAIP-210ENST00000489948 DOPEY1Q5JWR5 2465 aa11.7□□□□□ -0.54
TRAIP-210ENST00000489948 CACNA1CQ13936 2221 aa11.7□□□□□ -0.54
TRAIP-210ENST00000489948 A0A1W2PQL4 384 aaPredicted RBP11.69□□□□□ -0.54
TRAIP-210ENST00000489948 MAGEA13PA6NCF6 341 aa11.69□□□□□ -0.54
TRAIP-210ENST00000489948 PTGES3LE9PB15 166 aa11.69□□□□□ -0.54
TRAIP-210ENST00000489948 ZNF670-ZNF695F2Z2N8 137 aa11.69□□□□□ -0.54
TRAIP-210ENST00000489948 LYZL6O75951 148 aa11.69□□□□□ -0.54
TRAIP-210ENST00000489948 SEC14L2O76054 403 aa11.69□□□□□ -0.54
TRAIP-210ENST00000489948 UBL3O95164 117 aa11.69□□□□□ -0.54
TRAIP-210ENST00000489948 MT-ND2P03891 347 aa11.69□□□□□ -0.54
TRAIP-210ENST00000489948 MMP7P09237 267 aaPredicted RBP11.69□□□□□ -0.54
TRAIP-210ENST00000489948 LIMS3P0CW19 117 aa11.69□□□□□ -0.54
TRAIP-210ENST00000489948 LIMS4P0CW20 117 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms