RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 TMEM269A0A1B0GVZ9 245 aa14.09□□□□□ -0.15
BRD9-208ENST00000489816 A0A1W2PNR3 127 aa14.09□□□□□ -0.15
BRD9-208ENST00000489816 TNFRSF10AO00220 468 aa14.09□□□□□ -0.15
BRD9-208ENST00000489816 XRCC3O43542 346 aa14.09□□□□□ -0.15
BRD9-208ENST00000489816 ZNF28P17035 718 aa14.09□□□□□ -0.15
BRD9-208ENST00000489816 CXCL2P19875 107 aa14.09□□□□□ -0.15
BRD9-208ENST00000489816 MNDAP41218 407 aa14.09□□□□□ -0.15
BRD9-208ENST00000489816 TLE3Q04726 772 aa14.09□□□□□ -0.15
BRD9-208ENST00000489816 GLO1Q04760 184 aa14.09□□□□□ -0.15
BRD9-208ENST00000489816 RASGEF1BQ0VAM2 473 aa14.09□□□□□ -0.15
BRD9-208ENST00000489816 CAMK2BQ13554 666 aa14.09□□□□□ -0.15
BRD9-208ENST00000489816 EMC4Q5J8M3 183 aa14.09□□□□□ -0.15
BRD9-208ENST00000489816 RNF144BQ7Z419 303 aa14.09□□□□□ -0.15
BRD9-208ENST00000489816 CD163Q86VB7 1156 aa14.09□□□□□ -0.15
BRD9-208ENST00000489816 OR2I1PQ8NGU4 316 aa14.09□□□□□ -0.15
BRD9-208ENST00000489816 SORCS2Q96PQ0 1159 aa14.09□□□□□ -0.15
BRD9-208ENST00000489816 TINAGL1Q9GZM7 467 aaPredicted RBP14.09□□□□□ -0.15
BRD9-208ENST00000489816 APMAPQ9HDC9 416 aa14.09□□□□□ -0.15
BRD9-208ENST00000489816 KLRF1Q9NZS2 232 aa14.09□□□□□ -0.15
BRD9-208ENST00000489816 MYO7BQ6PIF6 2116 aa14.09□□□□□ -0.15
BRD9-208ENST00000489816 TMEM235A6NFC5 223 aa14.08□□□□□ -0.15
BRD9-208ENST00000489816 FADS1O60427 444 aa14.08□□□□□ -0.15
BRD9-208ENST00000489816 KLK2P20151 261 aa14.08□□□□□ -0.15
BRD9-208ENST00000489816 CDAP32320 146 aa14.08□□□□□ -0.15
BRD9-208ENST00000489816 DNASE1L1P49184 302 aa14.08□□□□□ -0.15
BRD9-208ENST00000489816 PRKXP51817 358 aa14.08□□□□□ -0.15
BRD9-208ENST00000489816 H2BFSP57053 126 aa14.08□□□□□ -0.15
BRD9-208ENST00000489816 RSPO4Q2I0M5 234 aaPredicted RBP14.08□□□□□ -0.15
BRD9-208ENST00000489816 SLC22A6Q4U2R8 563 aa14.08□□□□□ -0.15
BRD9-208ENST00000489816 ALKAL2Q6UX46 152 aa14.08□□□□□ -0.15
BRD9-208ENST00000489816 C7orf50Q9BRJ6 194 aaKnown RBP14.08□□□□□ -0.15
BRD9-208ENST00000489816 EXO5Q9H790 373 aa14.08□□□□□ -0.15
BRD9-208ENST00000489816 FBXO4Q9UKT5 387 aa14.08□□□□□ -0.15
BRD9-208ENST00000489816 NPIPA5E9PKD4 350 aa14.08□□□□□ -0.16
BRD9-208ENST00000489816 MASP2O00187 686 aa14.08□□□□□ -0.16
BRD9-208ENST00000489816 GOSR2O14653 212 aa14.08□□□□□ -0.16
BRD9-208ENST00000489816 BCAT2O15382 392 aaPredicted RBP14.08□□□□□ -0.16
BRD9-208ENST00000489816 CD1AP06126 327 aa14.08□□□□□ -0.16
BRD9-208ENST00000489816 PRSS3P35030 304 aa14.08□□□□□ -0.16
BRD9-208ENST00000489816 SFTPDP35247 375 aa14.08□□□□□ -0.16
BRD9-208ENST00000489816 LRRC37A5PQ49AS3 106 aa14.08□□□□□ -0.16
BRD9-208ENST00000489816 TOR2AQ5JU69 321 aa14.08□□□□□ -0.16
BRD9-208ENST00000489816 GRINAQ7Z429 371 aa14.08□□□□□ -0.16
BRD9-208ENST00000489816 CDH24Q86UP0 819 aa14.08□□□□□ -0.16
BRD9-208ENST00000489816 C17orf82Q86X59 251 aaPredicted RBP14.08□□□□□ -0.16
BRD9-208ENST00000489816 MUC20Q8N307 709 aaPredicted RBP14.08□□□□□ -0.16
BRD9-208ENST00000489816 ZNF519Q8TB69 540 aa14.08□□□□□ -0.16
BRD9-208ENST00000489816 ZNF501Q96CX3 271 aaPredicted RBP14.08□□□□□ -0.16
BRD9-208ENST00000489816 MSANTD3Q96H12 275 aa14.08□□□□□ -0.16
BRD9-208ENST00000489816 SFXN2Q96NB2 322 aa14.08□□□□□ -0.16
BRD9-208ENST00000489816 NPIPA1Q9UND3 350 aa14.08□□□□□ -0.16
BRD9-208ENST00000489816 TRBV11-1A0A0K0K1C0 115 aa14.08□□□□□ -0.16
BRD9-208ENST00000489816 MS4A18H0YCH9 400 aa14.08□□□□□ -0.16
BRD9-208ENST00000489816 ALOX12BO75342 701 aa14.08□□□□□ -0.16
BRD9-208ENST00000489816 ZNF35P13682 527 aa14.08□□□□□ -0.16
BRD9-208ENST00000489816 FOXF1Q12946 379 aa14.08□□□□□ -0.16
BRD9-208ENST00000489816 MS4A18Q3C1V0 323 aa14.08□□□□□ -0.16
BRD9-208ENST00000489816 LIN54Q6MZP7 749 aa14.08□□□□□ -0.16
BRD9-208ENST00000489816 ZNF574Q6ZN55 896 aaPredicted RBP14.08□□□□□ -0.16
BRD9-208ENST00000489816 COMMD2Q86X83 199 aa14.08□□□□□ -0.16
BRD9-208ENST00000489816 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.08□□□□□ -0.16
BRD9-208ENST00000489816 TDHQ8IZJ6 230 aa14.08□□□□□ -0.16
BRD9-208ENST00000489816 SOX7Q9BT81 388 aa14.08□□□□□ -0.16
BRD9-208ENST00000489816 PHF7Q9BWX1 381 aaPredicted RBP14.08□□□□□ -0.16
BRD9-208ENST00000489816 MFRPQ9BY79 579 aa14.08□□□□□ -0.16
BRD9-208ENST00000489816 H7C417 338 aa14.07□□□□□ -0.16
BRD9-208ENST00000489816 NDUFB6O95139 128 aa14.07□□□□□ -0.16
BRD9-208ENST00000489816 HEXBP07686 556 aa14.07□□□□□ -0.16
BRD9-208ENST00000489816 PNLIPRP2P54317 469 aa14.07□□□□□ -0.16
BRD9-208ENST00000489816 FAM209AQ5JX71 171 aa14.07□□□□□ -0.16
BRD9-208ENST00000489816 PRAMEF20Q5VT98 475 aa14.07□□□□□ -0.16
BRD9-208ENST00000489816 ANKRD16Q6P6B7 361 aa14.07□□□□□ -0.16
BRD9-208ENST00000489816 OGFOD3Q6PK18 319 aa14.07□□□□□ -0.16
BRD9-208ENST00000489816 D2HGDHQ8N465 521 aa14.07□□□□□ -0.16
BRD9-208ENST00000489816 CHST4Q8NCG5 386 aa14.07□□□□□ -0.16
BRD9-208ENST00000489816 RNF128Q8TEB7 428 aa14.07□□□□□ -0.16
BRD9-208ENST00000489816 FGGYQ96C11 551 aa14.07□□□□□ -0.16
BRD9-208ENST00000489816 PLEKHA1Q9HB21 404 aa14.07□□□□□ -0.16
BRD9-208ENST00000489816 NPDC1Q9NQX5 325 aaPredicted RBP14.07□□□□□ -0.16
BRD9-208ENST00000489816 MTFP1Q9UDX5 166 aa14.07□□□□□ -0.16
BRD9-208ENST00000489816 LOC107986453A0A1B0GWG9 222 aa14.07□□□□□ -0.16
BRD9-208ENST00000489816 CCDC85CA6NKD9 419 aa14.07□□□□□ -0.16
BRD9-208ENST00000489816 BIDP55957 195 aa14.07□□□□□ -0.16
BRD9-208ENST00000489816 MFAP5Q13361 173 aa14.07□□□□□ -0.16
BRD9-208ENST00000489816 OPCMLQ14982 345 aa14.07□□□□□ -0.16
BRD9-208ENST00000489816 ESCO2Q56NI9 601 aa14.07□□□□□ -0.16
BRD9-208ENST00000489816 LCN10Q6JVE6 187 aa14.07□□□□□ -0.16
BRD9-208ENST00000489816 GUSBP11Q6P575 273 aa14.07□□□□□ -0.16
BRD9-208ENST00000489816 KCTD18Q6PI47 426 aaPredicted RBP14.07□□□□□ -0.16
BRD9-208ENST00000489816 APCDD1LQ8NCL9 501 aa14.07□□□□□ -0.16
BRD9-208ENST00000489816 STK35Q8TDR2 534 aa14.07□□□□□ -0.16
BRD9-208ENST00000489816 ZNF224Q9NZL3 707 aa14.07□□□□□ -0.16
BRD9-208ENST00000489816 RPH3AQ9Y2J0 694 aaPredicted RBP14.07□□□□□ -0.16
BRD9-208ENST00000489816 EML6Q6ZMW3 1958 aa14.06□□□□□ -0.16
BRD9-208ENST00000489816 A0A1B0GUH1 482 aa14.06□□□□□ -0.16
BRD9-208ENST00000489816 G3V3Y1 287 aa14.06□□□□□ -0.16
BRD9-208ENST00000489816 L7N2F9 121 aa14.06□□□□□ -0.16
BRD9-208ENST00000489816 EIF4E2O60573 245 aaKnown RBP14.06□□□□□ -0.16
BRD9-208ENST00000489816 NPIPB7O75200 414 aa14.06□□□□□ -0.16
BRD9-208ENST00000489816 DXOO77932 396 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms