RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 MTX3Q5HYI7 312 aa14.29□□□□□ -0.12
TOP3B-217ENST00000489581 SLC25A47Q6Q0C1 308 aa14.29□□□□□ -0.12
TOP3B-217ENST00000489581 DHDDSQ86SQ9 333 aa14.29□□□□□ -0.12
TOP3B-217ENST00000489581 JAZF1Q86VZ6 243 aa14.29□□□□□ -0.12
TOP3B-217ENST00000489581 ALDH16A1Q8IZ83 802 aa14.29□□□□□ -0.12
TOP3B-217ENST00000489581 SLC26A7Q8TE54 656 aa14.29□□□□□ -0.12
TOP3B-217ENST00000489581 TMEM255BQ8WV15 326 aa14.29□□□□□ -0.12
TOP3B-217ENST00000489581 TAMM41Q96BW9 452 aa14.29□□□□□ -0.12
TOP3B-217ENST00000489581 SGTBQ96EQ0 304 aa14.29□□□□□ -0.12
TOP3B-217ENST00000489581 CCDC28BQ9BUN5 200 aa14.29□□□□□ -0.12
TOP3B-217ENST00000489581 C20orf141Q9NUB4 165 aa14.29□□□□□ -0.12
TOP3B-217ENST00000489581 CGGBP1Q9UFW8 167 aaPredicted RBP14.29□□□□□ -0.12
TOP3B-217ENST00000489581 RAB21Q9UL25 225 aa14.29□□□□□ -0.12
TOP3B-217ENST00000489581 SOX21Q9Y651 276 aaPredicted RBP14.29□□□□□ -0.12
TOP3B-217ENST00000489581 GPANK1O95872 356 aa14.28□□□□□ -0.12
TOP3B-217ENST00000489581 LAP3P28838 519 aa14.28□□□□□ -0.12
TOP3B-217ENST00000489581 ARHGDIAP52565 204 aa14.28□□□□□ -0.12
TOP3B-217ENST00000489581 PSG7Q13046 419 aa14.28□□□□□ -0.12
TOP3B-217ENST00000489581 CDK5R2Q13319 367 aa14.28□□□□□ -0.12
TOP3B-217ENST00000489581 TOP3AQ13472 1001 aaPredicted RBP14.28□□□□□ -0.12
TOP3B-217ENST00000489581 TAF11Q15544 211 aa14.28□□□□□ -0.12
TOP3B-217ENST00000489581 SLC9A3R2Q15599 337 aa14.28□□□□□ -0.12
TOP3B-217ENST00000489581 TMEM155Q4W5P6 130 aa14.28□□□□□ -0.12
TOP3B-217ENST00000489581 ZMAT1Q5H9K5 638 aa14.28□□□□□ -0.12
TOP3B-217ENST00000489581 FAM27BQ5VT28 67 aa14.28□□□□□ -0.12
TOP3B-217ENST00000489581 ZNF774Q6NX45 483 aa14.28□□□□□ -0.12
TOP3B-217ENST00000489581 LEG1Q6P5S2 330 aa14.28□□□□□ -0.12
TOP3B-217ENST00000489581 PATL1Q86TB9 770 aaKnown RBP14.28□□□□□ -0.12
TOP3B-217ENST00000489581 LRRC28Q86X40 367 aaPredicted RBP14.28□□□□□ -0.12
TOP3B-217ENST00000489581 C1orf174Q8IYL3 243 aa14.28□□□□□ -0.12
TOP3B-217ENST00000489581 ZNF283Q8N7M2 679 aa14.28□□□□□ -0.12
TOP3B-217ENST00000489581 CLDN22Q8N7P3 220 aa14.28□□□□□ -0.12
TOP3B-217ENST00000489581 C4orf45Q96LM5 186 aa14.28□□□□□ -0.12
TOP3B-217ENST00000489581 C7orf26Q96N11 449 aa14.28□□□□□ -0.12
TOP3B-217ENST00000489581 CGREF1Q99674 301 aa14.28□□□□□ -0.12
TOP3B-217ENST00000489581 SMURF2Q9HAU4 748 aa14.28□□□□□ -0.12
TOP3B-217ENST00000489581 ELOVL3Q9HB03 270 aa14.28□□□□□ -0.12
TOP3B-217ENST00000489581 STX18Q9P2W9 335 aaKnown RBP14.28□□□□□ -0.12
TOP3B-217ENST00000489581 NOTCH1P46531 2555 aa14.28□□□□□ -0.12
TOP3B-217ENST00000489581 H3BSA7 217 aa14.27□□□□□ -0.13
TOP3B-217ENST00000489581 IGHV4-38-2P0DP08 117 aa14.27□□□□□ -0.13
TOP3B-217ENST00000489581 MDKP21741 143 aaPredicted RBP14.27□□□□□ -0.13
TOP3B-217ENST00000489581 OMGP23515 440 aa14.27□□□□□ -0.13
TOP3B-217ENST00000489581 BTG1P62324 171 aa14.27□□□□□ -0.13
TOP3B-217ENST00000489581 ZMYND11Q15326 602 aa14.27□□□□□ -0.13
TOP3B-217ENST00000489581 OR2Z1Q8NG97 314 aa14.27□□□□□ -0.13
TOP3B-217ENST00000489581 OR52E2Q8NGJ4 325 aa14.27□□□□□ -0.13
TOP3B-217ENST00000489581 ITLN1Q8WWA0 313 aa14.27□□□□□ -0.13
TOP3B-217ENST00000489581 TLCD1Q96CP7 247 aa14.27□□□□□ -0.13
TOP3B-217ENST00000489581 SAMD8Q96LT4 415 aa14.27□□□□□ -0.13
TOP3B-217ENST00000489581 SLITRK2Q9H156 845 aa14.27□□□□□ -0.13
TOP3B-217ENST00000489581 TXNIPQ9H3M7 391 aa14.27□□□□□ -0.13
TOP3B-217ENST00000489581 POFUT1Q9H488 388 aa14.27□□□□□ -0.13
TOP3B-217ENST00000489581 TIMM10BQ9Y5J6 103 aa14.27□□□□□ -0.13
TOP3B-217ENST00000489581 CMYA5Q8N3K9 4069 aa14.26□□□□□ -0.13
TOP3B-217ENST00000489581 A8MXK9 166 aa14.26□□□□□ -0.13
TOP3B-217ENST00000489581 F5H0A9 414 aaPredicted RBP14.26□□□□□ -0.13
TOP3B-217ENST00000489581 SHOX2O60902 331 aaPredicted RBP14.26□□□□□ -0.13
TOP3B-217ENST00000489581 VIMP08670 466 aaKnown RBP14.26□□□□□ -0.13
TOP3B-217ENST00000489581 CST2P09228 141 aa14.26□□□□□ -0.13
TOP3B-217ENST00000489581 TSPAN19P0C672 248 aa14.26□□□□□ -0.13
TOP3B-217ENST00000489581 TNFRSF1AP19438 455 aa14.26□□□□□ -0.13
TOP3B-217ENST00000489581 TNFRSF1BP20333 461 aa14.26□□□□□ -0.13
TOP3B-217ENST00000489581 TNFSF4P23510 183 aa14.26□□□□□ -0.13
TOP3B-217ENST00000489581 CD80P33681 288 aa14.26□□□□□ -0.13
TOP3B-217ENST00000489581 PCGF2P35227 344 aa14.26□□□□□ -0.13
TOP3B-217ENST00000489581 CRYBA2P53672 197 aa14.26□□□□□ -0.13
TOP3B-217ENST00000489581 TAS2R41P59536 307 aa14.26□□□□□ -0.13
TOP3B-217ENST00000489581 PAX8Q06710 450 aa14.26□□□□□ -0.13
TOP3B-217ENST00000489581 ESCO2Q56NI9 601 aa14.26□□□□□ -0.13
TOP3B-217ENST00000489581 Q6ZR03 302 aa14.26□□□□□ -0.13
TOP3B-217ENST00000489581 ZER1Q7Z7L7 766 aa14.26□□□□□ -0.13
TOP3B-217ENST00000489581 SLC30A8Q8IWU4 369 aa14.26□□□□□ -0.13
TOP3B-217ENST00000489581 OR10A6Q8NH74 314 aa14.26□□□□□ -0.13
TOP3B-217ENST00000489581 TMEM239Q8WW34 195 aa14.26□□□□□ -0.13
TOP3B-217ENST00000489581 RBP7Q96R05 134 aa14.26□□□□□ -0.13
TOP3B-217ENST00000489581 SIGLEC11Q96RL6 698 aa14.26□□□□□ -0.13
TOP3B-217ENST00000489581 KAT8Q9H7Z6 458 aaKnown RBP14.26□□□□□ -0.13
TOP3B-217ENST00000489581 RIMS3Q9UJD0 308 aa14.26□□□□□ -0.13
TOP3B-217ENST00000489581 SH3GLB1Q9Y371 365 aa14.26□□□□□ -0.13
TOP3B-217ENST00000489581 NDUFAF1Q9Y375 327 aa14.26□□□□□ -0.13
TOP3B-217ENST00000489581 VWFP04275 2813 aa14.25□□□□□ -0.13
TOP3B-217ENST00000489581 A0A1W2PPL8 197 aa14.25□□□□□ -0.13
TOP3B-217ENST00000489581 CLDN34H7C241 214 aa14.25□□□□□ -0.13
TOP3B-217ENST00000489581 ICMTO60725 284 aa14.25□□□□□ -0.13
TOP3B-217ENST00000489581 ABHD16AO95870 558 aa14.25□□□□□ -0.13
TOP3B-217ENST00000489581 NR2C1P13056 603 aa14.25□□□□□ -0.13
TOP3B-217ENST00000489581 RBM34P42696 430 aaKnown RBP14.25□□□□□ -0.13
TOP3B-217ENST00000489581 GUCA1AP43080 201 aaPredicted RBP14.25□□□□□ -0.13
TOP3B-217ENST00000489581 MTNR1AP48039 350 aa14.25□□□□□ -0.13
TOP3B-217ENST00000489581 PCBD1P61457 104 aa14.25□□□□□ -0.13
TOP3B-217ENST00000489581 INTS11Q5TA45 600 aaKnown RBP14.25□□□□□ -0.13
TOP3B-217ENST00000489581 ARL9Q6T311 187 aa14.25□□□□□ -0.13
TOP3B-217ENST00000489581 SPATC1Q76KD6 591 aa14.25□□□□□ -0.13
TOP3B-217ENST00000489581 PARP8Q8N3A8 854 aa14.25□□□□□ -0.13
TOP3B-217ENST00000489581 LIPHQ8WWY8 451 aa14.25□□□□□ -0.13
TOP3B-217ENST00000489581 TMIGD2Q96BF3 282 aa14.25□□□□□ -0.13
TOP3B-217ENST00000489581 ALG12Q9BV10 488 aa14.25□□□□□ -0.13
TOP3B-217ENST00000489581 TMBIM4Q9HC24 238 aa14.25□□□□□ -0.13
TOP3B-217ENST00000489581 OR5V1Q9UGF6 321 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 261.7 ms