RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 EMC7Q9NPA0 242 aa14.97□□□□□ -0.01
MDC1-206ENST00000489540 TBC1D23Q9NUY8 699 aa14.97□□□□□ -0.01
MDC1-206ENST00000489540 GDF2Q9UK05 429 aaPredicted RBP14.97□□□□□ -0.01
MDC1-206ENST00000489540 NDUFS7O75251 213 aa14.96□□□□□ -0.01
MDC1-206ENST00000489540 DEAF1O75398 565 aaPredicted RBP14.96□□□□□ -0.01
MDC1-206ENST00000489540 CIB2O75838 187 aa14.96□□□□□ -0.01
MDC1-206ENST00000489540 CCL2P13500 99 aa14.96□□□□□ -0.01
MDC1-206ENST00000489540 CENPAP49450 140 aa14.96□□□□□ -0.01
MDC1-206ENST00000489540 GDI2P50395 445 aaKnown RBP14.96□□□□□ -0.01
MDC1-206ENST00000489540 ERFP50548 548 aa14.96□□□□□ -0.01
MDC1-206ENST00000489540 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.96□□□□□ -0.01
MDC1-206ENST00000489540 SCRN3Q0VDG4 424 aa14.96□□□□□ -0.01
MDC1-206ENST00000489540 CLEC12BQ2HXU8 276 aa14.96□□□□□ -0.01
MDC1-206ENST00000489540 UNQ6126/PRO20091Q6UXV3 157 aa14.96□□□□□ -0.01
MDC1-206ENST00000489540 TMEM179BQ7Z7N9 219 aa14.96□□□□□ -0.01
MDC1-206ENST00000489540 LNX2Q8N448 690 aa14.96□□□□□ -0.01
MDC1-206ENST00000489540 NPEPL1Q8NDH3 523 aa14.96□□□□□ -0.01
MDC1-206ENST00000489540 OR2T33Q8NG76 320 aa14.96□□□□□ -0.01
MDC1-206ENST00000489540 AKR7LQ8NHP1 331 aa14.96□□□□□ -0.01
MDC1-206ENST00000489540 MRPL24Q96A35 216 aaKnown RBP14.96□□□□□ -0.01
MDC1-206ENST00000489540 NRBF2Q96F24 287 aa14.96□□□□□ -0.01
MDC1-206ENST00000489540 POM121L2Q96KW2 1035 aa14.96□□□□□ -0.01
MDC1-206ENST00000489540 FOXN4Q96NZ1 517 aa14.96□□□□□ -0.01
MDC1-206ENST00000489540 TSSK2Q96PF2 358 aa14.96□□□□□ -0.01
MDC1-206ENST00000489540 DOK1Q99704 481 aa14.96□□□□□ -0.01
MDC1-206ENST00000489540 NIPSNAP1Q9BPW8 284 aa14.96□□□□□ -0.01
MDC1-206ENST00000489540 RACGAP1Q9H0H5 632 aa14.96□□□□□ -0.01
MDC1-206ENST00000489540 ZNF556Q9HAH1 456 aa14.96□□□□□ -0.01
MDC1-206ENST00000489540 RPRD1BQ9NQG5 326 aaKnown RBP14.96□□□□□ -0.01
MDC1-206ENST00000489540 DLL4Q9NR61 685 aa14.96□□□□□ -0.01
MDC1-206ENST00000489540 EIF3KQ9UBQ5 218 aaKnown RBP14.96□□□□□ -0.01
MDC1-206ENST00000489540 FKBP7Q9Y680 259 aa14.96□□□□□ -0.01
MDC1-206ENST00000489540 ITPR3Q14573 2671 aa14.95□□□□□ -0.02
MDC1-206ENST00000489540 IGLV1-36A0A0B4J1U3 117 aa14.95□□□□□ -0.02
MDC1-206ENST00000489540 TMEM129A0AVI4 362 aa14.95□□□□□ -0.02
MDC1-206ENST00000489540 OR6C68A6NDL8 312 aa14.95□□□□□ -0.02
MDC1-206ENST00000489540 EBAG9O00559 213 aa14.95□□□□□ -0.02
MDC1-206ENST00000489540 GPRIN2O60269 458 aa14.95□□□□□ -0.02
MDC1-206ENST00000489540 COX5BP10606 129 aa14.95□□□□□ -0.02
MDC1-206ENST00000489540 ANXA8P13928 327 aa14.95□□□□□ -0.02
MDC1-206ENST00000489540 EFNA4P52798 201 aa14.95□□□□□ -0.02
MDC1-206ENST00000489540 UCP2P55851 309 aa14.95□□□□□ -0.02
MDC1-206ENST00000489540 GLO1Q04760 184 aa14.95□□□□□ -0.02
MDC1-206ENST00000489540 AQP6Q13520 282 aa14.95□□□□□ -0.02
MDC1-206ENST00000489540 ZNF774Q6NX45 483 aa14.95□□□□□ -0.02
MDC1-206ENST00000489540 ZBTB46Q86UZ6 589 aa14.95□□□□□ -0.02
MDC1-206ENST00000489540 PAQR4Q8N4S7 273 aaPredicted RBP14.95□□□□□ -0.02
MDC1-206ENST00000489540 OR8D4Q8NGM9 314 aa14.95□□□□□ -0.02
MDC1-206ENST00000489540 C11orf40Q8WZ69 217 aa14.95□□□□□ -0.02
MDC1-206ENST00000489540 BCL2L14Q9BZR8 327 aa14.95□□□□□ -0.02
MDC1-206ENST00000489540 ARMC1Q9NVT9 282 aa14.95□□□□□ -0.02
MDC1-206ENST00000489540 C5orf49A4QMS7 147 aa14.94□□□□□ -0.02
MDC1-206ENST00000489540 DCTN6O00399 190 aa14.94□□□□□ -0.02
MDC1-206ENST00000489540 TIPRLO75663 272 aa14.94□□□□□ -0.02
MDC1-206ENST00000489540 MPZL1O95297 269 aa14.94□□□□□ -0.02
MDC1-206ENST00000489540 SOX14O95416 240 aa14.94□□□□□ -0.02
MDC1-206ENST00000489540 F12P00748 615 aaPredicted RBP14.94□□□□□ -0.02
MDC1-206ENST00000489540 TP53P04637 393 aaPredicted RBP14.94□□□□□ -0.02
MDC1-206ENST00000489540 IGFBP1P08833 259 aaPredicted RBP14.94□□□□□ -0.02
MDC1-206ENST00000489540 CCNOP22674 350 aa14.94□□□□□ -0.02
MDC1-206ENST00000489540 PPOXP50336 477 aa14.94□□□□□ -0.02
MDC1-206ENST00000489540 NUDT6P53370 316 aa14.94□□□□□ -0.02
MDC1-206ENST00000489540 SELENOVP59797 346 aa14.94□□□□□ -0.02
MDC1-206ENST00000489540 SLC36A3Q495N2 470 aa14.94□□□□□ -0.02
MDC1-206ENST00000489540 RGS7BPQ6MZT1 257 aaPredicted RBP14.94□□□□□ -0.02
MDC1-206ENST00000489540 SHQ1Q6PI26 577 aaKnown RBP14.94□□□□□ -0.02
MDC1-206ENST00000489540 C1orf174Q8IYL3 243 aa14.94□□□□□ -0.02
MDC1-206ENST00000489540 SVOPLQ8N434 492 aa14.94□□□□□ -0.02
MDC1-206ENST00000489540 SDR9C7Q8NEX9 313 aa14.94□□□□□ -0.02
MDC1-206ENST00000489540 TEX47Q8TBZ9 253 aa14.94□□□□□ -0.02
MDC1-206ENST00000489540 DUS3LQ96G46 650 aaKnown RBP14.94□□□□□ -0.02
MDC1-206ENST00000489540 C18orf12Q96KH6 178 aa14.94□□□□□ -0.02
MDC1-206ENST00000489540 DDOQ99489 341 aa14.94□□□□□ -0.02
MDC1-206ENST00000489540 REV1Q9UBZ9 1251 aa14.94□□□□□ -0.02
MDC1-206ENST00000489540 KLHL21Q9UJP4 597 aa14.94□□□□□ -0.02
MDC1-206ENST00000489540 NDRG4Q9ULP0 352 aaKnown RBP14.94□□□□□ -0.02
MDC1-206ENST00000489540 AP4S1Q9Y587 144 aa14.94□□□□□ -0.02
MDC1-206ENST00000489540 HIVEP1P15822 2718 aa14.94□□□□□ -0.02
MDC1-206ENST00000489540 LOC100509620A0A075B734 347 aa14.93□□□□□ -0.02
MDC1-206ENST00000489540 H3BN98 237 aa14.93□□□□□ -0.02
MDC1-206ENST00000489540 SGCEO43556 437 aa14.93□□□□□ -0.02
MDC1-206ENST00000489540 SSX4O60224 188 aa14.93□□□□□ -0.02
MDC1-206ENST00000489540 ERCC1P07992 297 aaPredicted RBP14.93□□□□□ -0.02
MDC1-206ENST00000489540 FAM157BP0CG42 384 aa14.93□□□□□ -0.02
MDC1-206ENST00000489540 DSCR9P59020 149 aa14.93□□□□□ -0.02
MDC1-206ENST00000489540 ZNF362Q5T0B9 420 aaPredicted RBP14.93□□□□□ -0.02
MDC1-206ENST00000489540 ARL9Q6T311 187 aa14.93□□□□□ -0.02
MDC1-206ENST00000489540 OR2T4Q8NH00 348 aa14.93□□□□□ -0.02
MDC1-206ENST00000489540 UTP4Q969X6 686 aaKnown RBP14.93□□□□□ -0.02
MDC1-206ENST00000489540 VRK1Q99986 396 aaPredicted RBP14.93□□□□□ -0.02
MDC1-206ENST00000489540 MRPL37Q9BZE1 423 aaKnown RBP14.93□□□□□ -0.02
MDC1-206ENST00000489540 RAB1BQ9H0U4 201 aa14.93□□□□□ -0.02
MDC1-206ENST00000489540 NTN4Q9HB63 628 aa14.93□□□□□ -0.02
MDC1-206ENST00000489540 ASH2LQ9UBL3 628 aa14.93□□□□□ -0.02
MDC1-206ENST00000489540 POLR1DQ9Y2S0 133 aa14.93□□□□□ -0.02
MDC1-206ENST00000489540 IFNGP01579 166 aa14.92□□□□□ -0.02
MDC1-206ENST00000489540 LCKP06239 509 aa14.92□□□□□ -0.02
MDC1-206ENST00000489540 GAAP10253 952 aa14.92□□□□□ -0.02
MDC1-206ENST00000489540 PRKACGP22612 351 aa14.92□□□□□ -0.02
MDC1-206ENST00000489540 FASP25445 335 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms