RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 MMP26Q9NRE1 261 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 SLC25A37Q9NYZ2 338 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 HEBP2Q9Y5Z4 205 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 SAR1BQ9Y6B6 198 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 CHD4Q14839 1912 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 COL22A1Q8NFW1 1626 aaPredicted RBP2.97□□□□□ -1.93
XRN1-213ENST00000489241 ZNF318Q5VUA4 2279 aa2.96□□□□□ -1.93
XRN1-213ENST00000489241 MAPK8IP3Q9UPT6 1336 aa2.96□□□□□ -1.93
XRN1-213ENST00000489241 ADAMTS9Q9P2N4 1935 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 A0A1W2PPV4 95 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 TSPAN11A1L157 253 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 K7EMT4 169 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 FLOT1O75955 427 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 AQP8O94778 261 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 LSM8O95777 96 aaKnown RBP2.96□□□□□ -1.94
XRN1-213ENST00000489241 TGM6O95932 706 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 OXTP01178 125 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 HBE1P02100 147 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 MBP02144 154 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 UBTFL6P0CB48 400 aaPredicted RBP2.96□□□□□ -1.94
XRN1-213ENST00000489241 CT45A6P0DMU7 189 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 CT45A5P0DMU8 189 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 CT45A7P0DMV0 189 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 SMIM10L1P0DMW3 83 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 NR2C1P13056 603 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 SLC26A3P40879 764 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 ETV1P50549 477 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 NDPQ00604 133 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 PON3Q15166 354 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 ZSCAN26Q16670 478 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 RPEL1Q2QD12 228 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 TRMT5Q32P41 509 aaKnown RBP2.96□□□□□ -1.94
XRN1-213ENST00000489241 CT45A1Q5HYN5 189 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 COA6Q5JTJ3 125 aaKnown RBP2.96□□□□□ -1.94
XRN1-213ENST00000489241 ANKRD22Q5VYY1 191 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 INO80EQ8NBZ0 244 aaPredicted RBP2.96□□□□□ -1.94
XRN1-213ENST00000489241 OR2L5Q8NG80 312 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 CT45A3Q8NHU0 189 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 MCOLN3Q8TDD5 553 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 RDH5Q92781 318 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 FAM3DQ96BQ1 224 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 PHYHIPLQ96FC7 376 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 SMIM10Q96HG1 83 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 IMMP1LQ96LU5 166 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 CFAP53Q96M91 514 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 CSPG4P5Q96PW8 444 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 OR2M2Q96R28 347 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 MRPL37Q9BZE1 423 aaKnown RBP2.96□□□□□ -1.94
XRN1-213ENST00000489241 TMEM9BQ9NQ34 198 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 CLN6Q9NWW5 311 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 YARS2Q9Y2Z4 477 aaKnown RBP2.96□□□□□ -1.94
XRN1-213ENST00000489241 MRPS18BQ9Y676 258 aaKnown RBP2.96□□□□□ -1.94
XRN1-213ENST00000489241 ARHGAP23Q9P227 1491 aa2.96□□□□□ -1.94
XRN1-213ENST00000489241 CENPJQ9HC77 1338 aaPredicted RBP2.95□□□□□ -1.94
XRN1-213ENST00000489241 WDR62O43379 1518 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 A0A0J9YYE9 177 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 LOC100653049A0A140TA62 436 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 A0A1B0GUH1 482 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 H7C0C1 242 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 XKRYO14609 159 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 SPOPO43791 374 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 KRT34O76011 436 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 ACTL6AO96019 429 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 INSP01308 110 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 TRBC1P01850 177 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 ARG1P05089 322 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 KRT16P08779 473 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 GNAO1P09471 354 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 STAG3L2P0CL84 134 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 ZNF30P17039 623 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 BMI1P35226 326 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 RFC3P40938 356 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 UNC119Q13432 240 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 PSG5Q15238 335 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 GABRA6Q16445 453 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 AADACL4Q5VUY2 407 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 GPR107Q5VW38 600 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 TEX43Q6ZNM6 134 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 MREGQ8N565 214 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 CCDC54Q8NEL0 328 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 OR5T3Q8NGG3 340 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 OR10J6PQ8NGY7 276 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 MITD1Q8WV92 249 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 RAB1CQ92928 201 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 DNAJC19Q96DA6 116 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 SLC35E1Q96K37 410 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 TSSK3Q96PN8 268 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 FOXC2Q99958 501 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 ZC4H2Q9NQZ6 224 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 ADAM22Q9P0K1 906 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 CELA1Q9UNI1 258 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 TP53TG5Q9Y2B4 290 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 COMMD3-BMI1R4GMX3 469 aa2.95□□□□□ -1.94
XRN1-213ENST00000489241 RAI1Q7Z5J4 1906 aaPredicted RBP2.95□□□□□ -1.94
XRN1-213ENST00000489241 PDS5BQ9NTI5 1447 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 CIB4A0PJX0 185 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 KMOO15229 486 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 FARS2O95363 451 aaKnown RBP2.94□□□□□ -1.94
XRN1-213ENST00000489241 IGLV1-47P01700 117 aa2.94□□□□□ -1.94
XRN1-213ENST00000489241 BGLAPP02818 100 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms