RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 NTF4P34130 210 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 PSMB10P40306 273 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 TGM4P49221 684 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 RIDAP52758 137 aaKnown RBP8.84□□□□□ -0.99
USP11-211ENST00000489111 VBP1P61758 197 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 LSM6P62312 80 aaKnown RBP8.84□□□□□ -0.99
USP11-211ENST00000489111 RPS25P62851 125 aaKnown RBP8.84□□□□□ -0.99
USP11-211ENST00000489111 SIRPAP78324 504 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 SLC3A1Q07837 685 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 KLRB1Q12918 225 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 ACACAQ13085 2346 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 GPR50Q13585 617 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 CDK5R1Q15078 307 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 TAF13Q15543 124 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 CTF1Q16619 201 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 CEACAM16Q2WEN9 425 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 ZNF684Q5T5D7 378 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 TSPO2Q5TGU0 170 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 NSUN5P2Q63ZY6 315 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 RPL22L1Q6P5R6 122 aaKnown RBP8.84□□□□□ -0.99
USP11-211ENST00000489111 CORO6Q6QEF8 472 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 C19orf48Q6RUI8 117 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 RPTNQ6XPR3 784 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 GDPGP1Q6ZNW5 385 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 CD163Q86VB7 1156 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.84□□□□□ -0.99
USP11-211ENST00000489111 ZNF679Q8IYX0 411 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 GCNT2Q8N0V5 402 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 Q8NA96 180 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 KDF1Q8NAX2 398 aaPredicted RBP8.84□□□□□ -0.99
USP11-211ENST00000489111 HTRA1Q92743 480 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 TMEM203Q969S6 136 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 SMIM19Q96E16 107 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 AMELYQ99218 206 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 COQ7Q99807 217 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 FOXB1Q99853 325 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 DCUN1D5Q9BTE7 237 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 ZNF416Q9BWM5 594 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 OR51E2Q9H255 320 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 C1orf198Q9H425 327 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 PRORYQ9H606 182 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 C12orf49Q9H741 205 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 ELOVL3Q9HB03 270 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 CENPMQ9NSP4 180 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 TMEM38BQ9NVV0 291 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 ASH2LQ9UBL3 628 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 CYB5R1Q9UHQ9 305 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 GDF2Q9UK05 429 aaPredicted RBP8.84□□□□□ -0.99
USP11-211ENST00000489111 GTF2A1LQ9UNN4 478 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 LHFPL6Q9Y693 200 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 FRYQ5TBA9 3013 aa8.84□□□□□ -0.99
USP11-211ENST00000489111 TRBV2A0A0J9YWF9 115 aa8.83□□□□□ -1
USP11-211ENST00000489111 CD8B2A6NJW9 211 aa8.83□□□□□ -1
USP11-211ENST00000489111 ZNF878C9JN71 531 aa8.83□□□□□ -1
USP11-211ENST00000489111 GPRIN2O60269 458 aa8.83□□□□□ -1
USP11-211ENST00000489111 ZNF254O75437 659 aa8.83□□□□□ -1
USP11-211ENST00000489111 RGS9O75916 674 aaPredicted RBP8.83□□□□□ -1
USP11-211ENST00000489111 ATE1O95260 518 aa8.83□□□□□ -1
USP11-211ENST00000489111 ABHD16AO95870 558 aa8.83□□□□□ -1
USP11-211ENST00000489111 SFTPCP11686 197 aa8.83□□□□□ -1
USP11-211ENST00000489111 B4GALT1P15291 398 aa8.83□□□□□ -1
USP11-211ENST00000489111 GDI2P50395 445 aaKnown RBP8.83□□□□□ -1
USP11-211ENST00000489111 PER3P56645 1201 aa8.83□□□□□ -1
USP11-211ENST00000489111 NCS1P62166 190 aa8.83□□□□□ -1
USP11-211ENST00000489111 RBPJQ06330 500 aa8.83□□□□□ -1
USP11-211ENST00000489111 AQP6Q13520 282 aa8.83□□□□□ -1
USP11-211ENST00000489111 TRAM1Q15629 374 aa8.83□□□□□ -1
USP11-211ENST00000489111 STK11Q15831 433 aa8.83□□□□□ -1
USP11-211ENST00000489111 ZNF829Q3KNS6 432 aaPredicted RBP8.83□□□□□ -1
USP11-211ENST00000489111 C1orf185Q5T7R7 199 aa8.83□□□□□ -1
USP11-211ENST00000489111 LIPNQ5VXI9 398 aa8.83□□□□□ -1
USP11-211ENST00000489111 ZNF324BQ6AW86 544 aaPredicted RBP8.83□□□□□ -1
USP11-211ENST00000489111 DMKNQ6E0U4 476 aaPredicted RBP8.83□□□□□ -1
USP11-211ENST00000489111 OR7E24Q6IFN5 339 aa8.83□□□□□ -1
USP11-211ENST00000489111 KLHL24Q6TFL4 600 aa8.83□□□□□ -1
USP11-211ENST00000489111 GFRALQ6UXV0 394 aa8.83□□□□□ -1
USP11-211ENST00000489111 CFAP77Q6ZQR2 320 aa8.83□□□□□ -1
USP11-211ENST00000489111 USP43Q70EL4 1123 aa8.83□□□□□ -1
USP11-211ENST00000489111 FAM214BQ7L5A3 538 aa8.83□□□□□ -1
USP11-211ENST00000489111 NUFIP2Q7Z417 695 aaKnown RBP8.83□□□□□ -1
USP11-211ENST00000489111 FGD2Q7Z6J4 655 aa8.83□□□□□ -1
USP11-211ENST00000489111 CNEP1R1Q8N9A8 125 aa8.83□□□□□ -1
USP11-211ENST00000489111 NDNFQ8TB73 568 aa8.83□□□□□ -1
USP11-211ENST00000489111 FAM57AQ8TBR7 257 aa8.83□□□□□ -1
USP11-211ENST00000489111 ST7LQ8TDW4 575 aa8.83□□□□□ -1
USP11-211ENST00000489111 RNF133Q8WVZ7 376 aa8.83□□□□□ -1
USP11-211ENST00000489111 NABP1Q96AH0 204 aa8.83□□□□□ -1
USP11-211ENST00000489111 SLAMF6Q96DU3 332 aa8.83□□□□□ -1
USP11-211ENST00000489111 SLX1AQ9BQ83 275 aa8.83□□□□□ -1
USP11-211ENST00000489111 SLC25A18Q9H1K4 315 aa8.83□□□□□ -1
USP11-211ENST00000489111 KCNN2Q9H2S1 579 aa8.83□□□□□ -1
USP11-211ENST00000489111 SIAEQ9HAT2 523 aa8.83□□□□□ -1
USP11-211ENST00000489111 SLC7A10Q9NS82 523 aa8.83□□□□□ -1
USP11-211ENST00000489111 ST6GALNAC2Q9UJ37 374 aa8.83□□□□□ -1
USP11-211ENST00000489111 LRP12Q9Y561 859 aa8.83□□□□□ -1
USP11-211ENST00000489111 SIRT4Q9Y6E7 314 aaPredicted RBP8.83□□□□□ -1
USP11-211ENST00000489111 ASPMQ8IZT6 3477 aa8.83□□□□□ -1
USP11-211ENST00000489111 PCNX3Q9H6A9 2034 aa8.83□□□□□ -1
USP11-211ENST00000489111 CNTRLQ7Z7A1 2325 aa8.82□□□□□ -1
USP11-211ENST00000489111 A0A1W2PPW3 197 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms