RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 ATP6V1B2P21281 511 aa21.39■■□□□ 1.01
HMGN1-217ENST00000489072 MNAT1P51948 309 aa21.39■■□□□ 1.01
HMGN1-217ENST00000489072 KLF3P57682 345 aaPredicted RBP21.39■■□□□ 1.01
HMGN1-217ENST00000489072 RIN1Q13671 783 aa21.39■■□□□ 1.01
HMGN1-217ENST00000489072 GPR139Q6DWJ6 353 aa21.39■■□□□ 1.01
HMGN1-217ENST00000489072 PTCHD4Q6ZW05 846 aa21.39■■□□□ 1.01
HMGN1-217ENST00000489072 C11orf40Q8WZ69 217 aa21.39■■□□□ 1.01
HMGN1-217ENST00000489072 MCUR1Q96AQ8 359 aa21.39■■□□□ 1.01
HMGN1-217ENST00000489072 NSL1Q96IY1 281 aa21.39■■□□□ 1.01
HMGN1-217ENST00000489072 SYT4Q9H2B2 425 aa21.39■■□□□ 1.01
HMGN1-217ENST00000489072 IL1RAPQ9NPH3 570 aa21.39■■□□□ 1.01
HMGN1-217ENST00000489072 SOCS2O14508 198 aa21.38■■□□□ 1.01
HMGN1-217ENST00000489072 NCR1O76036 304 aa21.38■■□□□ 1.01
HMGN1-217ENST00000489072 FAM107AO95990 144 aa21.38■■□□□ 1.01
HMGN1-217ENST00000489072 RRM2P31350 389 aa21.38■■□□□ 1.01
HMGN1-217ENST00000489072 GZMKP49863 264 aa21.38■■□□□ 1.01
HMGN1-217ENST00000489072 GDI2P50395 445 aaKnown RBP21.38■■□□□ 1.01
HMGN1-217ENST00000489072 PCBD1P61457 104 aa21.38■■□□□ 1.01
HMGN1-217ENST00000489072 NKPD1Q17RQ9 610 aa21.38■■□□□ 1.01
HMGN1-217ENST00000489072 SMARCD3Q6STE5 483 aa21.38■■□□□ 1.01
HMGN1-217ENST00000489072 CYP2R1Q6VVX0 501 aa21.38■■□□□ 1.01
HMGN1-217ENST00000489072 DPY19L2P2Q6ZN68 376 aa21.38■■□□□ 1.01
HMGN1-217ENST00000489072 ZDHHC21Q8IVQ6 265 aa21.38■■□□□ 1.01
HMGN1-217ENST00000489072 OR1J1Q8NGS3 322 aa21.38■■□□□ 1.01
HMGN1-217ENST00000489072 SOX7Q9BT81 388 aa21.38■■□□□ 1.01
HMGN1-217ENST00000489072 VSX1Q9NZR4 365 aaPredicted RBP21.38■■□□□ 1.01
HMGN1-217ENST00000489072 CUBNO60494 3623 aa21.37■■□□□ 1.01
HMGN1-217ENST00000489072 SVEP1Q4LDE5 3571 aa21.37■■□□□ 1.01
HMGN1-217ENST00000489072 LRP5LA4QPB2 252 aa21.37■■□□□ 1.01
HMGN1-217ENST00000489072 C12orf71A8MTZ7 269 aa21.37■■□□□ 1.01
HMGN1-217ENST00000489072 LILRA1O75019 489 aa21.37■■□□□ 1.01
HMGN1-217ENST00000489072 TXNDC12O95881 172 aa21.37■■□□□ 1.01
HMGN1-217ENST00000489072 COL8A2P25067 703 aa21.37■■□□□ 1.01
HMGN1-217ENST00000489072 SELENOVP59797 346 aa21.37■■□□□ 1.01
HMGN1-217ENST00000489072 TMEM255AQ5JRV8 349 aa21.37■■□□□ 1.01
HMGN1-217ENST00000489072 SPATA46Q5T0L3 261 aa21.37■■□□□ 1.01
HMGN1-217ENST00000489072 OTPQ5XKR4 325 aa21.37■■□□□ 1.01
HMGN1-217ENST00000489072 SYT9Q86SS6 491 aa21.37■■□□□ 1.01
HMGN1-217ENST00000489072 ALDH16A1Q8IZ83 802 aa21.37■■□□□ 1.01
HMGN1-217ENST00000489072 FANK1Q8TC84 345 aa21.37■■□□□ 1.01
HMGN1-217ENST00000489072 GTF3AQ92664 365 aaKnown RBP21.37■■□□□ 1.01
HMGN1-217ENST00000489072 MSI2Q96DH6 328 aaKnown RBP21.37■■□□□ 1.01
HMGN1-217ENST00000489072 ACTR3BQ9P1U1 418 aa21.37■■□□□ 1.01
HMGN1-217ENST00000489072 COL6A5A8TX70 2615 aa21.36■■□□□ 1.01
HMGN1-217ENST00000489072 SLC16A7O60669 478 aa21.36■■□□□ 1.01
HMGN1-217ENST00000489072 PPP1R3DO95685 299 aa21.36■■□□□ 1.01
HMGN1-217ENST00000489072 TACSTD2P09758 323 aa21.36■■□□□ 1.01
HMGN1-217ENST00000489072 CDKN2AP42771 156 aaKnown RBP21.36■■□□□ 1.01
HMGN1-217ENST00000489072 MAGEB1P43366 347 aa21.36■■□□□ 1.01
HMGN1-217ENST00000489072 TRIP10Q15642 601 aa21.36■■□□□ 1.01
HMGN1-217ENST00000489072 RINLQ6ZS11 566 aa21.36■■□□□ 1.01
HMGN1-217ENST00000489072 RFPL4BQ6ZWI9 263 aa21.36■■□□□ 1.01
HMGN1-217ENST00000489072 ADCK1Q86TW2 530 aa21.36■■□□□ 1.01
HMGN1-217ENST00000489072 CCDC197Q8NCU1 140 aa21.36■■□□□ 1.01
HMGN1-217ENST00000489072 RERGLQ9H628 205 aa21.36■■□□□ 1.01
HMGN1-217ENST00000489072 HINT3Q9NQE9 182 aaKnown RBP21.36■■□□□ 1.01
HMGN1-217ENST00000489072 EIF3KQ9UBQ5 218 aaKnown RBP21.36■■□□□ 1.01
HMGN1-217ENST00000489072 COA3Q9Y2R0 106 aaPredicted RBP21.36■■□□□ 1.01
HMGN1-217ENST00000489072 FBN1P35555 2871 aaKnown RBP21.36■■□□□ 1.01
HMGN1-217ENST00000489072 MXRA5Q9NR99 2828 aa21.36■■□□□ 1.01
HMGN1-217ENST00000489072 C17orf100A8MU93 164 aa21.35■■□□□ 1.01
HMGN1-217ENST00000489072 OR10H3O60404 316 aa21.35■■□□□ 1.01
HMGN1-217ENST00000489072 KHDRBS3O75525 346 aaKnown RBP21.35■■□□□ 1.01
HMGN1-217ENST00000489072 MPZL1O95297 269 aa21.35■■□□□ 1.01
HMGN1-217ENST00000489072 T-ENOLP0DO92 83 aa21.35■■□□□ 1.01
HMGN1-217ENST00000489072 FPR3P25089 353 aa21.35■■□□□ 1.01
HMGN1-217ENST00000489072 IL2RGP31785 369 aa21.35■■□□□ 1.01
HMGN1-217ENST00000489072 MPV17P39210 176 aa21.35■■□□□ 1.01
HMGN1-217ENST00000489072 RPS6KA3P51812 740 aa21.35■■□□□ 1.01
HMGN1-217ENST00000489072 GLO1Q04760 184 aa21.35■■□□□ 1.01
HMGN1-217ENST00000489072 YIPF5Q969M3 257 aa21.35■■□□□ 1.01
HMGN1-217ENST00000489072 MARS2Q96GW9 593 aaKnown RBP21.35■■□□□ 1.01
HMGN1-217ENST00000489072 NUAK2Q9H093 628 aa21.35■■□□□ 1.01
HMGN1-217ENST00000489072 OR52D1Q9H346 318 aa21.35■■□□□ 1.01
HMGN1-217ENST00000489072 SLCO1C1Q9NYB5 712 aa21.35■■□□□ 1.01
HMGN1-217ENST00000489072 TCRBV5S2A0A599 114 aa21.34■■□□□ 1.01
HMGN1-217ENST00000489072 ICMTO60725 284 aa21.34■■□□□ 1.01
HMGN1-217ENST00000489072 NGFP01138 241 aa21.34■■□□□ 1.01
HMGN1-217ENST00000489072 IGHV3-13P01766 116 aa21.34■■□□□ 1.01
HMGN1-217ENST00000489072 GSSP48637 474 aa21.34■■□□□ 1.01
HMGN1-217ENST00000489072 RFX4Q33E94 735 aa21.34■■□□□ 1.01
HMGN1-217ENST00000489072 GLB1L2Q8IW92 636 aa21.34■■□□□ 1.01
HMGN1-217ENST00000489072 SLC25A40Q8TBP6 338 aa21.34■■□□□ 1.01
HMGN1-217ENST00000489072 RDH5Q92781 318 aa21.34■■□□□ 1.01
HMGN1-217ENST00000489072 TSSK2Q96PF2 358 aa21.34■■□□□ 1.01
HMGN1-217ENST00000489072 ERMAPQ96PL5 475 aaPredicted RBP21.34■■□□□ 1.01
HMGN1-217ENST00000489072 SNX18Q96RF0 628 aa21.34■■□□□ 1.01
HMGN1-217ENST00000489072 WACQ9BTA9 647 aa21.34■■□□□ 1.01
HMGN1-217ENST00000489072 CHODLQ9H9P2 273 aa21.34■■□□□ 1.01
HMGN1-217ENST00000489072 TMEM160Q9NX00 188 aa21.34■■□□□ 1.01
HMGN1-217ENST00000489072 GPR160Q9UJ42 338 aa21.34■■□□□ 1.01
HMGN1-217ENST00000489072 TMCC3Q9ULS5 477 aa21.34■■□□□ 1.01
HMGN1-217ENST00000489072 DNHD1Q96M86 4753 aa21.34■■□□□ 1.01
HMGN1-217ENST00000489072 LOC100289279A0A1B0GTE1 492 aa21.33■■□□□ 1.01
HMGN1-217ENST00000489072 DCTN6O00399 190 aa21.33■■□□□ 1.01
HMGN1-217ENST00000489072 CHN2P52757 468 aa21.33■■□□□ 1.01
HMGN1-217ENST00000489072 DBPQ10586 325 aaPredicted RBP21.33■■□□□ 1.01
HMGN1-217ENST00000489072 ZNF718Q3SXZ3 478 aa21.33■■□□□ 1.01
HMGN1-217ENST00000489072 CHRFAM7AQ494W8 412 aa21.33■■□□□ 1.01
HMGN1-217ENST00000489072 C1orf94Q6P1W5 598 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms