RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 XKRXQ6PP77 449 aa17.14■□□□□ 0.33
CCM2-216ENST00000488727 TMEM91Q6ZNR0 172 aa17.14■□□□□ 0.33
CCM2-216ENST00000488727 H1FNTQ75WM6 255 aaPredicted RBP17.14■□□□□ 0.33
CCM2-216ENST00000488727 TUSC5Q8IXB3 177 aa17.14■□□□□ 0.33
CCM2-216ENST00000488727 KDM8Q8N371 416 aa17.14■□□□□ 0.33
CCM2-216ENST00000488727 SCAIQ8N9R8 606 aa17.14■□□□□ 0.33
CCM2-216ENST00000488727 HTRA1Q92743 480 aa17.14■□□□□ 0.33
CCM2-216ENST00000488727 GMPPAQ96IJ6 420 aaPredicted RBP17.14■□□□□ 0.33
CCM2-216ENST00000488727 ZFP3Q96NJ6 502 aa17.14■□□□□ 0.33
CCM2-216ENST00000488727 KCNN2Q9H2S1 579 aa17.14■□□□□ 0.33
CCM2-216ENST00000488727 RERGLQ9H628 205 aa17.14■□□□□ 0.33
CCM2-216ENST00000488727 MRPL39Q9NYK5 338 aaKnown RBP17.14■□□□□ 0.33
CCM2-216ENST00000488727 KLHL9Q9P2J3 617 aa17.14■□□□□ 0.33
CCM2-216ENST00000488727 B3GAT1Q9P2W7 334 aa17.14■□□□□ 0.33
CCM2-216ENST00000488727 B3GALT5Q9Y2C3 310 aa17.14■□□□□ 0.33
CCM2-216ENST00000488727 NOX1Q9Y5S8 564 aa17.14■□□□□ 0.33
CCM2-216ENST00000488727 SS18L1O75177 396 aaPredicted RBP17.13■□□□□ 0.33
CCM2-216ENST00000488727 TNFSF13O75888 250 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 RNF224P0DH78 156 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 MTNR1BP49286 362 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 ZNF85Q03923 595 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 SLC17A1Q14916 467 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 LCN1P1Q5VSP4 162 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 TMEM225Q6GV28 225 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 GDPD3Q7L5L3 318 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 GDPD1Q8N9F7 314 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 POMGNT2Q8NAT1 580 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 OR5J2Q8NH18 312 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 CHAC2Q8WUX2 184 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 HDHD5Q9BXW7 423 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 BCO1Q9HAY6 547 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 TBC1D24Q9ULP9 559 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 SIRT4Q9Y6E7 314 aaPredicted RBP17.13■□□□□ 0.33
CCM2-216ENST00000488727 IGKV3D-15A0A087WSY6 115 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 A0A1W2PNV4 684 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 HSPB2A8KAH6 182 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 MCIDASD6RGH6 385 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 MS4A18H0YCH9 400 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 PLPP2O43688 288 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 IDH3BO43837 385 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 PLGP00747 810 aaPredicted RBP17.13■□□□□ 0.33
CCM2-216ENST00000488727 CLUP10909 449 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 SPNP16150 400 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 KIR2DL2P43627 348 aaPredicted RBP17.13■□□□□ 0.33
CCM2-216ENST00000488727 SLC16A1P53985 500 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 CDSNQ15517 529 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 HSPB2Q16082 182 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 MS4A18Q3C1V0 323 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 VWA1Q6PCB0 445 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 GPAT4Q86UL3 456 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 LIX1LQ8IVB5 337 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 MCEMP1Q8IX19 187 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 CYB561A3Q8NBI2 242 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 ADPRHL1Q8NDY3 354 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 OR52E2Q8NGJ4 325 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 ZNF775Q96BV0 537 aaPredicted RBP17.13■□□□□ 0.33
CCM2-216ENST00000488727 TBX5Q99593 518 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 NRIP3Q9NQ35 241 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 GLRX2Q9NS18 164 aa17.13■□□□□ 0.33
CCM2-216ENST00000488727 CLEC18AA5D8T8 446 aa17.12■□□□□ 0.33
CCM2-216ENST00000488727 PLPP3O14495 311 aa17.12■□□□□ 0.33
CCM2-216ENST00000488727 HIST1H1CP16403 213 aaKnown RBP17.12■□□□□ 0.33
CCM2-216ENST00000488727 CTSSP25774 331 aa17.12■□□□□ 0.33
CCM2-216ENST00000488727 PTBP1P26599 531 aaKnown RBP eCLIP17.12■□□□□ 0.339e-9■■■■■ 35.7
CCM2-216ENST00000488727 AGTR1P30556 359 aa17.12■□□□□ 0.33
CCM2-216ENST00000488727 PRPS1P60891 318 aa17.12■□□□□ 0.33
CCM2-216ENST00000488727 SIRPAP78324 504 aa17.12■□□□□ 0.33
CCM2-216ENST00000488727 SLC35D3Q5M8T2 416 aa17.12■□□□□ 0.33
CCM2-216ENST00000488727 METAP1DQ6UB28 335 aaPredicted RBP17.12■□□□□ 0.33
CCM2-216ENST00000488727 CLEC18BQ6UXF7 455 aa17.12■□□□□ 0.33
CCM2-216ENST00000488727 FAM214BQ7L5A3 538 aa17.12■□□□□ 0.33
CCM2-216ENST00000488727 VASH1Q7L8A9 365 aaPredicted RBP17.12■□□□□ 0.33
CCM2-216ENST00000488727 OR8H2Q8N162 312 aa17.12■□□□□ 0.33
CCM2-216ENST00000488727 CLEC18CQ8NCF0 446 aa17.12■□□□□ 0.33
CCM2-216ENST00000488727 TXNDC15Q96J42 360 aa17.12■□□□□ 0.33
CCM2-216ENST00000488727 ATF6BQ99941 703 aa17.12■□□□□ 0.33
CCM2-216ENST00000488727 GP6Q9HCN6 339 aa17.12■□□□□ 0.33
CCM2-216ENST00000488727 C14orf119Q9NWQ9 140 aa17.12■□□□□ 0.33
CCM2-216ENST00000488727 TAS2R5Q9NYW4 299 aa17.12■□□□□ 0.33
CCM2-216ENST00000488727 RASD1Q9Y272 281 aa17.12■□□□□ 0.33
CCM2-216ENST00000488727 IER3IP1Q9Y5U9 82 aa17.12■□□□□ 0.33
CCM2-216ENST00000488727 SHISA3A0PJX4 238 aa17.11■□□□□ 0.33
CCM2-216ENST00000488727 AGFG2O95081 481 aa17.11■□□□□ 0.33
CCM2-216ENST00000488727 CRHP06850 196 aa17.11■□□□□ 0.33
CCM2-216ENST00000488727 YES1P07947 543 aa17.11■□□□□ 0.33
CCM2-216ENST00000488727 MRPL3P09001 348 aaKnown RBP17.11■□□□□ 0.33
CCM2-216ENST00000488727 CD8BP10966 210 aa17.11■□□□□ 0.33
CCM2-216ENST00000488727 IL7P13232 177 aa17.11■□□□□ 0.33
CCM2-216ENST00000488727 NTF4P34130 210 aa17.11■□□□□ 0.33
CCM2-216ENST00000488727 LGALS3BPQ08380 585 aa17.11■□□□□ 0.33
CCM2-216ENST00000488727 ZMAT1Q5H9K5 638 aa17.11■□□□□ 0.33
CCM2-216ENST00000488727 FAM131AQ6UXB0 335 aa17.11■□□□□ 0.33
CCM2-216ENST00000488727 CCBE1Q6UXH8 406 aaPredicted RBP17.11■□□□□ 0.33
CCM2-216ENST00000488727 NANOGNBQ7Z5D8 188 aa17.11■□□□□ 0.33
CCM2-216ENST00000488727 CNEP1R1Q8N9A8 125 aa17.11■□□□□ 0.33
CCM2-216ENST00000488727 SDR9C7Q8NEX9 313 aa17.11■□□□□ 0.33
CCM2-216ENST00000488727 OR9K2Q8NGE7 335 aa17.11■□□□□ 0.33
CCM2-216ENST00000488727 ITLN2Q8WWU7 325 aaPredicted RBP17.11■□□□□ 0.33
CCM2-216ENST00000488727 DIRAS2Q96HU8 199 aa17.11■□□□□ 0.33
CCM2-216ENST00000488727 DDOQ99489 341 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms