RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 OR5H8P0DN80 308 aa1.91□□□□□ -2.1
CD46-215ENST00000488596 FOXN2P32314 431 aa1.91□□□□□ -2.1
CD46-215ENST00000488596 GPX4P36969 197 aaPredicted RBP1.91□□□□□ -2.1
CD46-215ENST00000488596 CEACAM3P40198 252 aa1.91□□□□□ -2.1
CD46-215ENST00000488596 ADARB1P78563 741 aaKnown RBP1.91□□□□□ -2.1
CD46-215ENST00000488596 SELENBP1Q13228 472 aa1.91□□□□□ -2.1
CD46-215ENST00000488596 UBE2SQ16763 222 aa1.91□□□□□ -2.1
CD46-215ENST00000488596 C9orf135Q5VTT2 229 aa1.91□□□□□ -2.1
CD46-215ENST00000488596 METTL21CQ5VZV1 264 aa1.91□□□□□ -2.1
CD46-215ENST00000488596 CARD17Q5XLA6 110 aa1.91□□□□□ -2.1
CD46-215ENST00000488596 LRRC66Q68CR7 880 aa1.91□□□□□ -2.1
CD46-215ENST00000488596 FAM71E1Q6IPT2 247 aa1.91□□□□□ -2.1
CD46-215ENST00000488596 FBXW12Q6X9E4 464 aa1.91□□□□□ -2.1
CD46-215ENST00000488596 ABHD12BQ7Z5M8 362 aaPredicted RBP1.91□□□□□ -2.1
CD46-215ENST00000488596 BIVMQ86UB2 503 aa1.91□□□□□ -2.1
CD46-215ENST00000488596 CTAGE6Q86UF2 777 aa1.91□□□□□ -2.1
CD46-215ENST00000488596 RIMKLAQ8IXN7 391 aa1.91□□□□□ -2.1
CD46-215ENST00000488596 UBALD1Q8TB05 177 aa1.91□□□□□ -2.1
CD46-215ENST00000488596 EEF1AKMT3Q96AZ1 226 aa1.91□□□□□ -2.1
CD46-215ENST00000488596 ECHDC3Q96DC8 303 aa1.91□□□□□ -2.1
CD46-215ENST00000488596 PDXPQ96GD0 296 aa1.91□□□□□ -2.1
CD46-215ENST00000488596 ZNF681Q96N22 645 aa1.91□□□□□ -2.1
CD46-215ENST00000488596 ZNF578Q96N58 590 aaPredicted RBP1.91□□□□□ -2.1
CD46-215ENST00000488596 PLIN2Q99541 437 aa1.91□□□□□ -2.1
CD46-215ENST00000488596 ZNF430Q9H8G1 570 aaPredicted RBP1.91□□□□□ -2.1
CD46-215ENST00000488596 WFDC1Q9HC57 220 aa1.91□□□□□ -2.1
CD46-215ENST00000488596 ISYNA1Q9NPH2 558 aa1.91□□□□□ -2.1
CD46-215ENST00000488596 VANGL2Q9ULK5 521 aa1.91□□□□□ -2.1
CD46-215ENST00000488596 TMED5Q9Y3A6 229 aa1.91□□□□□ -2.1
CD46-215ENST00000488596 YTHDF2Q9Y5A9 579 aaKnown RBP1.91□□□□□ -2.1
CD46-215ENST00000488596 SLIT3O75094 1523 aa1.91□□□□□ -2.1
CD46-215ENST00000488596 MAPK8IP3Q9UPT6 1336 aa1.91□□□□□ -2.1
CD46-215ENST00000488596 NINLQ9Y2I6 1382 aa1.9□□□□□ -2.11
CD46-215ENST00000488596 IGLV1-36A0A0B4J1U3 117 aa1.9□□□□□ -2.11
CD46-215ENST00000488596 IGHV5-10-1A0A0J9YXX1 117 aa1.9□□□□□ -2.11
CD46-215ENST00000488596 C9JVG2 144 aa1.9□□□□□ -2.11
CD46-215ENST00000488596 HLA-DPB1P04440 258 aa1.9□□□□□ -2.11
CD46-215ENST00000488596 EIF4EP06730 217 aaKnown RBP1.9□□□□□ -2.11
CD46-215ENST00000488596 ADRA2AP08913 450 aa1.9□□□□□ -2.11
CD46-215ENST00000488596 MRPL3P09001 348 aaKnown RBP1.9□□□□□ -2.11
CD46-215ENST00000488596 RHOXF2BP0C7M4 288 aa1.9□□□□□ -2.11
CD46-215ENST00000488596 RAB3BP20337 219 aa1.9□□□□□ -2.11
CD46-215ENST00000488596 DCKP27707 260 aa1.9□□□□□ -2.11
CD46-215ENST00000488596 NAMPTP43490 491 aa1.9□□□□□ -2.11
CD46-215ENST00000488596 CSNK1EP49674 416 aaKnown RBP1.9□□□□□ -2.11
CD46-215ENST00000488596 EIF3EP60228 445 aaKnown RBP1.9□□□□□ -2.11
CD46-215ENST00000488596 STXBP1P61764 594 aaKnown RBP1.9□□□□□ -2.11
CD46-215ENST00000488596 ESRRGP62508 458 aa1.9□□□□□ -2.11
CD46-215ENST00000488596 PON2Q15165 354 aa1.9□□□□□ -2.11
CD46-215ENST00000488596 RCN1Q15293 331 aa1.9□□□□□ -2.11
CD46-215ENST00000488596 XKR4Q5GH76 650 aa1.9□□□□□ -2.11
CD46-215ENST00000488596 C22orf42Q6IC83 251 aa1.9□□□□□ -2.11
CD46-215ENST00000488596 PRMT9Q6P2P2 845 aa1.9□□□□□ -2.11
CD46-215ENST00000488596 CERS6Q6ZMG9 384 aa1.9□□□□□ -2.11
CD46-215ENST00000488596 MBOAT1Q6ZNC8 495 aa1.9□□□□□ -2.11
CD46-215ENST00000488596 SLC16A14Q7RTX9 510 aa1.9□□□□□ -2.11
CD46-215ENST00000488596 NOXO1Q8NFA2 376 aa1.9□□□□□ -2.11
CD46-215ENST00000488596 OR4A4PQ8NGN8 299 aa1.9□□□□□ -2.11
CD46-215ENST00000488596 OR2L8Q8NGY9 312 aa1.9□□□□□ -2.11
CD46-215ENST00000488596 FAM81AQ8TBF8 368 aa1.9□□□□□ -2.11
CD46-215ENST00000488596 SYNPRQ8TBG9 265 aa1.9□□□□□ -2.11
CD46-215ENST00000488596 SLC38A4Q969I6 547 aa1.9□□□□□ -2.11
CD46-215ENST00000488596 TM4SF18Q96CE8 201 aa1.9□□□□□ -2.11
CD46-215ENST00000488596 NEURL3Q96EH8 262 aa1.9□□□□□ -2.11
CD46-215ENST00000488596 C20orf24Q9BUV8 137 aa1.9□□□□□ -2.11
CD46-215ENST00000488596 RPP21Q9H633 154 aaKnown RBP1.9□□□□□ -2.11
CD46-215ENST00000488596 BEX1Q9HBH7 125 aa1.9□□□□□ -2.11
CD46-215ENST00000488596 NEK6Q9HC98 313 aa1.9□□□□□ -2.11
CD46-215ENST00000488596 ZDHHC4Q9NPG8 344 aa1.9□□□□□ -2.11
CD46-215ENST00000488596 HRASLS2Q9NWW9 162 aa1.9□□□□□ -2.11
CD46-215ENST00000488596 LGALS13Q9UHV8 139 aa1.9□□□□□ -2.11
CD46-215ENST00000488596 DENND4AQ7Z401 1863 aa1.9□□□□□ -2.11
CD46-215ENST00000488596 PIKFYVEQ9Y2I7 2098 aa1.89□□□□□ -2.11
CD46-215ENST00000488596 IGLV4-60A0A075B6I1 120 aa1.89□□□□□ -2.11
CD46-215ENST00000488596 TRBV11-1A0A0K0K1C0 115 aa1.89□□□□□ -2.11
CD46-215ENST00000488596 A0A1B0GW55 424 aa1.89□□□□□ -2.11
CD46-215ENST00000488596 LRCOL1A6NCL2 159 aa1.89□□□□□ -2.11
CD46-215ENST00000488596 TEX46H3BTG2 121 aa1.89□□□□□ -2.11
CD46-215ENST00000488596 L7N2F9 121 aa1.89□□□□□ -2.11
CD46-215ENST00000488596 B4GALT5O43286 388 aa1.89□□□□□ -2.11
CD46-215ENST00000488596 EIF4E2O60573 245 aaKnown RBP1.89□□□□□ -2.11
CD46-215ENST00000488596 RDH16O75452 317 aa1.89□□□□□ -2.11
CD46-215ENST00000488596 FOXH1O75593 365 aa1.89□□□□□ -2.11
CD46-215ENST00000488596 RP2O75695 350 aa1.89□□□□□ -2.11
CD46-215ENST00000488596 SLC25A14O95258 325 aaPredicted RBP1.89□□□□□ -2.11
CD46-215ENST00000488596 WISP3O95389 354 aaPredicted RBP1.89□□□□□ -2.11
CD46-215ENST00000488596 H6PDO95479 791 aa1.89□□□□□ -2.11
CD46-215ENST00000488596 UBTFL6P0CB48 400 aaPredicted RBP1.89□□□□□ -2.11
CD46-215ENST00000488596 DUX4L2P0CJ85 424 aa1.89□□□□□ -2.11
CD46-215ENST00000488596 DUX4L3P0CJ86 424 aa1.89□□□□□ -2.11
CD46-215ENST00000488596 DUX4L5P0CJ88 424 aa1.89□□□□□ -2.11
CD46-215ENST00000488596 DUX4L6P0CJ89 424 aa1.89□□□□□ -2.11
CD46-215ENST00000488596 DUX4L7P0CJ90 424 aa1.89□□□□□ -2.11
CD46-215ENST00000488596 CCNB1P14635 433 aa1.89□□□□□ -2.11
CD46-215ENST00000488596 GGT1P19440 569 aa1.89□□□□□ -2.11
CD46-215ENST00000488596 GTF2E2P29084 291 aaKnown RBP1.89□□□□□ -2.11
CD46-215ENST00000488596 SLC1A1P43005 524 aa1.89□□□□□ -2.11
CD46-215ENST00000488596 TNNT2P45379 298 aaPredicted RBP1.89□□□□□ -2.11
CD46-215ENST00000488596 SYCNQ0VAF6 134 aa1.89□□□□□ -2.11
CD46-215ENST00000488596 CDH17Q12864 832 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms