RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 SLC18B1Q6NT16 456 aa11.29□□□□□ -0.6
NELFE-209ENST00000488426 ARL9Q6T311 187 aa11.29□□□□□ -0.6
NELFE-209ENST00000488426 FAM109AQ8N4B1 249 aa11.29□□□□□ -0.6
NELFE-209ENST00000488426 MS4A15Q8N5U1 240 aa11.29□□□□□ -0.6
NELFE-209ENST00000488426 OR10D3Q8NH80 312 aa11.29□□□□□ -0.6
NELFE-209ENST00000488426 RPS4Y2Q8TD47 263 aa11.29□□□□□ -0.6
NELFE-209ENST00000488426 SMIM19Q96E16 107 aa11.29□□□□□ -0.6
NELFE-209ENST00000488426 TTYH2Q9BSA4 534 aa11.29□□□□□ -0.6
NELFE-209ENST00000488426 MED18Q9BUE0 208 aa11.29□□□□□ -0.6
NELFE-209ENST00000488426 KCNN2Q9H2S1 579 aa11.29□□□□□ -0.6
NELFE-209ENST00000488426 ACOXLQ9NUZ1 547 aa11.29□□□□□ -0.6
NELFE-209ENST00000488426 NAV2Q8IVL1 2488 aa11.28□□□□□ -0.6
NELFE-209ENST00000488426 IGHV3-15A0A0B4J1V0 119 aa11.28□□□□□ -0.6
NELFE-209ENST00000488426 PRR32B1ATL7 298 aa11.28□□□□□ -0.6
NELFE-209ENST00000488426 CXCL13O43927 109 aa11.28□□□□□ -0.6
NELFE-209ENST00000488426 AQP8O94778 261 aa11.28□□□□□ -0.6
NELFE-209ENST00000488426 ABHD16AO95870 558 aa11.28□□□□□ -0.6
NELFE-209ENST00000488426 CELA3AP09093 270 aa11.28□□□□□ -0.6
NELFE-209ENST00000488426 ZNF823P16415 610 aa11.28□□□□□ -0.6
NELFE-209ENST00000488426 EIF1AXP47813 144 aaKnown RBP11.28□□□□□ -0.6
NELFE-209ENST00000488426 STARP49675 285 aa11.28□□□□□ -0.6
NELFE-209ENST00000488426 LHX2P50458 406 aa11.28□□□□□ -0.6
NELFE-209ENST00000488426 SUCLG1P53597 346 aaKnown RBP11.28□□□□□ -0.6
NELFE-209ENST00000488426 BCL2A1Q16548 175 aa11.28□□□□□ -0.6
NELFE-209ENST00000488426 MOGQ16653 247 aa11.28□□□□□ -0.6
NELFE-209ENST00000488426 PCK2Q16822 640 aa11.28□□□□□ -0.6
NELFE-209ENST00000488426 ZNF404Q494X3 552 aa11.28□□□□□ -0.6
NELFE-209ENST00000488426 ABLIM2Q6H8Q1 611 aa11.28□□□□□ -0.6
NELFE-209ENST00000488426 SLC25A47Q6Q0C1 308 aa11.28□□□□□ -0.6
NELFE-209ENST00000488426 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.28□□□□□ -0.6
NELFE-209ENST00000488426 ZGRF1Q86YA3 2104 aa11.28□□□□□ -0.6
NELFE-209ENST00000488426 UBQLNLQ8IYU4 475 aa11.28□□□□□ -0.6
NELFE-209ENST00000488426 THEM6Q8WUY1 208 aa11.28□□□□□ -0.6
NELFE-209ENST00000488426 INTS12Q96CB8 462 aaKnown RBP11.28□□□□□ -0.6
NELFE-209ENST00000488426 PGLYRP3Q96LB9 341 aa11.28□□□□□ -0.6
NELFE-209ENST00000488426 MMP27Q9H306 513 aa11.28□□□□□ -0.6
NELFE-209ENST00000488426 MRM2Q9UI43 246 aaKnown RBP11.28□□□□□ -0.6
NELFE-209ENST00000488426 KCNG2Q9UJ96 466 aa11.28□□□□□ -0.6
NELFE-209ENST00000488426 GRIP1Q9Y3R0 1128 aa11.28□□□□□ -0.6
NELFE-209ENST00000488426 PMF1-BGLAPU3KQ54 211 aa11.28□□□□□ -0.6
NELFE-209ENST00000488426 IGKV1D-43A0A0B4J1Z2 117 aa11.27□□□□□ -0.6
NELFE-209ENST00000488426 MAGEB4O15481 346 aaPredicted RBP11.27□□□□□ -0.6
NELFE-209ENST00000488426 LRRTM2O43300 516 aa11.27□□□□□ -0.6
NELFE-209ENST00000488426 GPRIN2O60269 458 aa11.27□□□□□ -0.6
NELFE-209ENST00000488426 ACTL6AO96019 429 aa11.27□□□□□ -0.6
NELFE-209ENST00000488426 HNRNPCP07910 306 aaKnown RBP eCLIP11.27□□□□□ -0.6
NELFE-209ENST00000488426 SPARCP09486 303 aa11.27□□□□□ -0.6
NELFE-209ENST00000488426 OR8G3PP0DMU2 310 aa11.27□□□□□ -0.6
NELFE-209ENST00000488426 NAT1P18440 290 aa11.27□□□□□ -0.6
NELFE-209ENST00000488426 EDNRAP25101 427 aa11.27□□□□□ -0.6
NELFE-209ENST00000488426 LAP3P28838 519 aa11.27□□□□□ -0.6
NELFE-209ENST00000488426 GDI2P50395 445 aaKnown RBP11.27□□□□□ -0.6
NELFE-209ENST00000488426 ZNF133P52736 654 aaPredicted RBP11.27□□□□□ -0.6
NELFE-209ENST00000488426 CLDN15P56746 228 aa11.27□□□□□ -0.6
NELFE-209ENST00000488426 ROM1Q03395 351 aa11.27□□□□□ -0.6
NELFE-209ENST00000488426 SLC3A1Q07837 685 aa11.27□□□□□ -0.6
NELFE-209ENST00000488426 SLC10A1Q14973 349 aa11.27□□□□□ -0.6
NELFE-209ENST00000488426 KCTD18Q6PI47 426 aaPredicted RBP11.27□□□□□ -0.6
NELFE-209ENST00000488426 RPTNQ6XPR3 784 aa11.27□□□□□ -0.6
NELFE-209ENST00000488426 PIAS4Q8N2W9 510 aaPredicted RBP11.27□□□□□ -0.6
NELFE-209ENST00000488426 ZADH2Q8N4Q0 377 aa11.27□□□□□ -0.6
NELFE-209ENST00000488426 MEIOBQ8N635 442 aa11.27□□□□□ -0.6
NELFE-209ENST00000488426 MCFD2Q8NI22 146 aa11.27□□□□□ -0.6
NELFE-209ENST00000488426 FOXN4Q96NZ1 517 aa11.27□□□□□ -0.6
NELFE-209ENST00000488426 OR2M2Q96R28 347 aa11.27□□□□□ -0.6
NELFE-209ENST00000488426 OR8B4Q96RC9 309 aa11.27□□□□□ -0.6
NELFE-209ENST00000488426 NXF2Q9GZY0 626 aaKnown RBP11.27□□□□□ -0.6
NELFE-209ENST00000488426 SLC6A15Q9H2J7 730 aa11.27□□□□□ -0.6
NELFE-209ENST00000488426 PAQR5Q9NXK6 330 aaPredicted RBP11.27□□□□□ -0.6
NELFE-209ENST00000488426 RCE1Q9Y256 329 aa11.27□□□□□ -0.6
NELFE-209ENST00000488426 TRAV17A0A0B4J275 112 aa11.27□□□□□ -0.61
NELFE-209ENST00000488426 TRBV2A0A0J9YWF9 115 aa11.27□□□□□ -0.61
NELFE-209ENST00000488426 TMCC2O75069 709 aa11.27□□□□□ -0.61
NELFE-209ENST00000488426 UPK3AO75631 287 aa11.27□□□□□ -0.61
NELFE-209ENST00000488426 SERPINA3P01011 423 aa11.27□□□□□ -0.61
NELFE-209ENST00000488426 PSKH1P11801 424 aa11.27□□□□□ -0.61
NELFE-209ENST00000488426 ZNF708P17019 499 aa11.27□□□□□ -0.61
NELFE-209ENST00000488426 CSNK1A1P48729 337 aa11.27□□□□□ -0.61
NELFE-209ENST00000488426 CLDN18P56856 261 aa11.27□□□□□ -0.61
NELFE-209ENST00000488426 LIPNQ5VXI9 398 aa11.27□□□□□ -0.61
NELFE-209ENST00000488426 CARD17Q5XLA6 110 aa11.27□□□□□ -0.61
NELFE-209ENST00000488426 TMEM91Q6ZNR0 172 aa11.27□□□□□ -0.61
NELFE-209ENST00000488426 TRILQ7L0X0 811 aa11.27□□□□□ -0.61
NELFE-209ENST00000488426 TMEM123Q8N131 208 aa11.27□□□□□ -0.61
NELFE-209ENST00000488426 YIPF7Q8N8F6 280 aa11.27□□□□□ -0.61
NELFE-209ENST00000488426 OR10H5Q8NGA6 315 aa11.27□□□□□ -0.61
NELFE-209ENST00000488426 GHSRQ92847 366 aa11.27□□□□□ -0.61
NELFE-209ENST00000488426 TMEM54Q969K7 222 aa11.27□□□□□ -0.61
NELFE-209ENST00000488426 MCHR2Q969V1 340 aa11.27□□□□□ -0.61
NELFE-209ENST00000488426 ZNF385AQ96PM9 386 aaKnown RBP11.27□□□□□ -0.61
NELFE-209ENST00000488426 HDHD5Q9BXW7 423 aa11.27□□□□□ -0.61
NELFE-209ENST00000488426 GLTPQ9NZD2 209 aa11.27□□□□□ -0.61
NELFE-209ENST00000488426 IKZF2Q9UKS7 526 aa11.27□□□□□ -0.61
NELFE-209ENST00000488426 ZNF716A6NP11 495 aa11.26□□□□□ -0.61
NELFE-209ENST00000488426 CYTIPO60759 359 aa11.26□□□□□ -0.61
NELFE-209ENST00000488426 SC5DO75845 299 aa11.26□□□□□ -0.61
NELFE-209ENST00000488426 WISP2O76076 250 aa11.26□□□□□ -0.61
NELFE-209ENST00000488426 ZNF432O94892 652 aa11.26□□□□□ -0.61
NELFE-209ENST00000488426 INHBBP09529 407 aa11.26□□□□□ -0.61
NELFE-209ENST00000488426 RPS19P39019 145 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms