RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 SLX4IPQ5VYV7 408 aa13.69□□□□□ -0.22
C9orf3-219ENST00000488186 LPCAT4Q643R3 524 aa13.69□□□□□ -0.22
C9orf3-219ENST00000488186 ADAM5Q6NVV9 412 aa13.69□□□□□ -0.22
C9orf3-219ENST00000488186 UGT2A3Q6UWM9 527 aa13.69□□□□□ -0.22
C9orf3-219ENST00000488186 SEZ6L2Q6UXD5 910 aa13.69□□□□□ -0.22
C9orf3-219ENST00000488186 CXXC5Q7LFL8 322 aaKnown RBP13.69□□□□□ -0.22
C9orf3-219ENST00000488186 SYT9Q86SS6 491 aa13.69□□□□□ -0.22
C9orf3-219ENST00000488186 CPOQ8IVL8 374 aa13.69□□□□□ -0.22
C9orf3-219ENST00000488186 OR1J2Q8NGS2 313 aa13.69□□□□□ -0.22
C9orf3-219ENST00000488186 OR2AJ1Q8NGZ0 328 aa13.69□□□□□ -0.22
C9orf3-219ENST00000488186 FBXO17Q96EF6 278 aa13.69□□□□□ -0.22
C9orf3-219ENST00000488186 HS3ST6Q96QI5 342 aa13.69□□□□□ -0.22
C9orf3-219ENST00000488186 DDOQ99489 341 aa13.69□□□□□ -0.22
C9orf3-219ENST00000488186 SLC29A1Q99808 456 aa13.69□□□□□ -0.22
C9orf3-219ENST00000488186 VCXQ9H320 206 aa13.69□□□□□ -0.22
C9orf3-219ENST00000488186 C1orf198Q9H425 327 aa13.69□□□□□ -0.22
C9orf3-219ENST00000488186 UBTD1Q9HAC8 227 aa13.69□□□□□ -0.22
C9orf3-219ENST00000488186 C8orf4Q9NR00 106 aa13.69□□□□□ -0.22
C9orf3-219ENST00000488186 IMPAD1Q9NX62 359 aa13.69□□□□□ -0.22
C9orf3-219ENST00000488186 ZNF224Q9NZL3 707 aa13.69□□□□□ -0.22
C9orf3-219ENST00000488186 CRNNQ9UBG3 495 aaPredicted RBP13.69□□□□□ -0.22
C9orf3-219ENST00000488186 MOKQ9UQ07 419 aa13.69□□□□□ -0.22
C9orf3-219ENST00000488186 SPEF1Q9Y4P9 236 aa13.69□□□□□ -0.22
C9orf3-219ENST00000488186 CREBBPQ92793 2442 aa13.69□□□□□ -0.22
C9orf3-219ENST00000488186 TVP23AA6NH52 213 aa13.68□□□□□ -0.22
C9orf3-219ENST00000488186 CYSRT1A8MQ03 144 aa13.68□□□□□ -0.22
C9orf3-219ENST00000488186 RRP9O43818 475 aaKnown RBP13.68□□□□□ -0.22
C9orf3-219ENST00000488186 IGLV1-44P01699 117 aa13.68□□□□□ -0.22
C9orf3-219ENST00000488186 CELA3BP08861 270 aa13.68□□□□□ -0.22
C9orf3-219ENST00000488186 GALK2Q01415 458 aa13.68□□□□□ -0.22
C9orf3-219ENST00000488186 SLC34A1Q06495 639 aa13.68□□□□□ -0.22
C9orf3-219ENST00000488186 AQP6Q13520 282 aa13.68□□□□□ -0.22
C9orf3-219ENST00000488186 ENDOGQ14249 297 aaKnown RBP13.68□□□□□ -0.22
C9orf3-219ENST00000488186 KCNMB1Q16558 191 aa13.68□□□□□ -0.22
C9orf3-219ENST00000488186 MEP1BQ16820 701 aa13.68□□□□□ -0.22
C9orf3-219ENST00000488186 TBC1D28Q2M2D7 210 aa13.68□□□□□ -0.22
C9orf3-219ENST00000488186 PABPC1L2AQ5JQF8 200 aa13.68□□□□□ -0.22
C9orf3-219ENST00000488186 OTPQ5XKR4 325 aa13.68□□□□□ -0.22
C9orf3-219ENST00000488186 TCEANCQ8N8B7 351 aa13.68□□□□□ -0.22
C9orf3-219ENST00000488186 GJC3Q8NFK1 279 aa13.68□□□□□ -0.22
C9orf3-219ENST00000488186 AKR7LQ8NHP1 331 aa13.68□□□□□ -0.22
C9orf3-219ENST00000488186 AKAP1Q92667 903 aaKnown RBP eCLIP13.68□□□□□ -0.22
C9orf3-219ENST00000488186 PTP4A1Q93096 173 aa13.68□□□□□ -0.22
C9orf3-219ENST00000488186 NMNAT2Q9BZQ4 307 aa13.68□□□□□ -0.22
C9orf3-219ENST00000488186 OR2H1Q9GZK4 316 aa13.68□□□□□ -0.22
C9orf3-219ENST00000488186 TOR3AQ9H497 397 aa13.68□□□□□ -0.22
C9orf3-219ENST00000488186 CDH20Q9HBT6 801 aa13.68□□□□□ -0.22
C9orf3-219ENST00000488186 NOX3Q9HBY0 568 aa13.68□□□□□ -0.22
C9orf3-219ENST00000488186 AKAP6Q13023 2319 aa13.68□□□□□ -0.22
C9orf3-219ENST00000488186 PDZD2O15018 2839 aa13.68□□□□□ -0.22
C9orf3-219ENST00000488186 POLQO75417 2590 aa13.67□□□□□ -0.22
C9orf3-219ENST00000488186 VSTM5A8MXK1 200 aa13.67□□□□□ -0.22
C9orf3-219ENST00000488186 GLCEO94923 617 aa13.67□□□□□ -0.22
C9orf3-219ENST00000488186 SNAP29O95721 258 aa13.67□□□□□ -0.22
C9orf3-219ENST00000488186 PLAUP00749 431 aa13.67□□□□□ -0.22
C9orf3-219ENST00000488186 TFP02787 698 aa13.67□□□□□ -0.22
C9orf3-219ENST00000488186 MMP7P09237 267 aaPredicted RBP13.67□□□□□ -0.22
C9orf3-219ENST00000488186 GAAP10253 952 aa13.67□□□□□ -0.22
C9orf3-219ENST00000488186 CLUP10909 449 aa13.67□□□□□ -0.22
C9orf3-219ENST00000488186 ZNF14P17017 642 aaPredicted RBP13.67□□□□□ -0.22
C9orf3-219ENST00000488186 CCNOP22674 350 aa13.67□□□□□ -0.22
C9orf3-219ENST00000488186 CDH11P55287 796 aa13.67□□□□□ -0.22
C9orf3-219ENST00000488186 ADAM8P78325 824 aa13.67□□□□□ -0.22
C9orf3-219ENST00000488186 PSG4Q00888 419 aa13.67□□□□□ -0.22
C9orf3-219ENST00000488186 NAAAQ02083 359 aa13.67□□□□□ -0.22
C9orf3-219ENST00000488186 DBPQ10586 325 aaPredicted RBP13.67□□□□□ -0.22
C9orf3-219ENST00000488186 C12orf73Q69YU5 71 aa13.67□□□□□ -0.22
C9orf3-219ENST00000488186 PACRGLQ8N7B6 248 aa13.67□□□□□ -0.22
C9orf3-219ENST00000488186 ZNF555Q8NEP9 628 aa13.67□□□□□ -0.22
C9orf3-219ENST00000488186 SLC30A7Q8NEW0 376 aa13.67□□□□□ -0.22
C9orf3-219ENST00000488186 KBTBD8Q8NFY9 601 aa13.67□□□□□ -0.22
C9orf3-219ENST00000488186 SLC26A10Q8NG04 563 aa13.67□□□□□ -0.22
C9orf3-219ENST00000488186 TMEM163Q8TC26 289 aa13.67□□□□□ -0.22
C9orf3-219ENST00000488186 MS4A3Q96HJ5 214 aa13.67□□□□□ -0.22
C9orf3-219ENST00000488186 IL4I1Q96RQ9 567 aa13.67□□□□□ -0.22
C9orf3-219ENST00000488186 HINT3Q9NQE9 182 aaKnown RBP13.67□□□□□ -0.22
C9orf3-219ENST00000488186 SMPD3Q9NY59 655 aaPredicted RBP13.67□□□□□ -0.22
C9orf3-219ENST00000488186 PLEK2Q9NYT0 353 aa13.67□□□□□ -0.22
C9orf3-219ENST00000488186 ASH2LQ9UBL3 628 aa13.67□□□□□ -0.22
C9orf3-219ENST00000488186 KCNG2Q9UJ96 466 aa13.67□□□□□ -0.22
C9orf3-219ENST00000488186 GMPPBQ9Y5P6 360 aa13.67□□□□□ -0.22
C9orf3-219ENST00000488186 ATP6V1G2-DDX39BF2Z307 99 aa13.66□□□□□ -0.22
C9orf3-219ENST00000488186 PRODHO43272 600 aa13.66□□□□□ -0.22
C9orf3-219ENST00000488186 SGCEO43556 437 aa13.66□□□□□ -0.22
C9orf3-219ENST00000488186 PRKYO43930 277 aa13.66□□□□□ -0.22
C9orf3-219ENST00000488186 STOMP27105 288 aa13.66□□□□□ -0.22
C9orf3-219ENST00000488186 LOXP28300 417 aaPredicted RBP13.66□□□□□ -0.22
C9orf3-219ENST00000488186 PEX2P28328 305 aa13.66□□□□□ -0.22
C9orf3-219ENST00000488186 GSTT1P30711 240 aa13.66□□□□□ -0.22
C9orf3-219ENST00000488186 GDI2P50395 445 aaKnown RBP13.66□□□□□ -0.22
C9orf3-219ENST00000488186 SPOCK1Q08629 439 aa13.66□□□□□ -0.22
C9orf3-219ENST00000488186 APOFQ13790 326 aa13.66□□□□□ -0.22
C9orf3-219ENST00000488186 ZNF672Q499Z4 452 aaPredicted RBP13.66□□□□□ -0.22
C9orf3-219ENST00000488186 SLC35D3Q5M8T2 416 aa13.66□□□□□ -0.22
C9orf3-219ENST00000488186 LCN1P1Q5VSP4 162 aa13.66□□□□□ -0.22
C9orf3-219ENST00000488186 ZNF774Q6NX45 483 aa13.66□□□□□ -0.22
C9orf3-219ENST00000488186 ZNF511Q8NB15 262 aa13.66□□□□□ -0.22
C9orf3-219ENST00000488186 OR4F15Q8NGB8 312 aa13.66□□□□□ -0.22
C9orf3-219ENST00000488186 FAM81AQ8TBF8 368 aa13.66□□□□□ -0.22
C9orf3-219ENST00000488186 LURAP1Q96LR2 239 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms