RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 GOLT1BQ9Y3E0 138 aa1.65□□□□□ -2.15
R3HDM1-219ENST00000488035 GPATCH8Q9UKJ3 1502 aaKnown RBP1.65□□□□□ -2.15
R3HDM1-219ENST00000488035 IGHV5-10-1A0A0J9YXX1 117 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 A0A1B0GW55 424 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 A0A1W2PP18 115 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 ZNF705GA8MUZ8 300 aaPredicted RBP1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 K7EMT4 169 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 DYNC1I1O14576 645 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 DNALI1O14645 258 aaPredicted RBP1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 AIM2O14862 343 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 NUPL2O15504 423 aaKnown RBP1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 MED6O75586 246 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 RAB3DO95716 219 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 MRPL3P09001 348 aaKnown RBP1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 DUX4L2P0CJ85 424 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 DUX4L3P0CJ86 424 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 DUX4L5P0CJ88 424 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 DUX4L6P0CJ89 424 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 DUX4L7P0CJ90 424 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 TROVE2P10155 538 aaKnown RBP eCLIP1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 ZNF24P17028 368 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 DCKP27707 260 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 CEACAM3P40198 252 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 KIR3DL2P43630 455 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 CSNK1EP49674 416 aaKnown RBP1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 ESRRGP62508 458 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 ERCC8Q13216 396 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 PRPSAP1Q14558 356 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 GINS1Q14691 196 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 ABCA11PQ4W5N1 156 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 CCNJQ5T5M9 372 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 Q5W150 140 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 REEP3Q6NUK4 255 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 ARL9Q6T311 187 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 SLC16A14Q7RTX9 510 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 CMTM1Q8IZ96 169 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 OR10AD1Q8NGE0 317 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 UBALD1Q8TB05 177 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 NUBPLQ8TB37 319 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 CAPSLQ8WWF8 208 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 EXOSC8Q96B26 276 aaKnown RBP1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 FOPNLQ96NB1 174 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 SLC25A2Q9BXI2 301 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 SAV1Q9H4B6 383 aaPredicted RBP1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 RETNQ9HD89 108 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 ISYNA1Q9NPH2 558 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 SIRT7Q9NRC8 400 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 CYTL1Q9NRR1 136 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 UVRAGQ9P2Y5 699 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 DUX4Q9UBX2 424 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 OR12D3Q9UGF7 316 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 SLIT3O75094 1523 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 TNS2Q63HR2 1409 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 GAKO14976 1311 aa1.64□□□□□ -2.15
R3HDM1-219ENST00000488035 USP47Q96K76 1375 aa1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 IGKV2-28A0A075B6P5 120 aa1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 TEX46H3BTG2 121 aa1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 L7N2F9 121 aa1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 LSM1O15116 133 aaKnown RBP1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 ZNF207O43670 478 aaKnown RBP1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 IGKV2D-28P01615 120 aa1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 FTH1P02794 183 aa1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 HLA-DPB1P04440 258 aa1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 ADRA2AP08913 450 aa1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 RHOXF2BP0C7M4 288 aa1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 IGHV1-8P0DP01 117 aa1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 PMELP40967 661 aa1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 ADARB1P78563 741 aaKnown RBP1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 CUL2Q13617 745 aa1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 OR7A5Q15622 319 aa1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 SNRNP35Q16560 246 aaKnown RBP1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 C9orf135Q5VTT2 229 aa1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 RAET1LQ5VY80 246 aa1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 MBOAT1Q6ZNC8 495 aa1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 WDR86Q86TI4 376 aa1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 IQCKQ8N0W5 287 aa1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 TTC5Q8N0Z6 440 aa1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 NOXO1Q8NFA2 376 aa1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 OR4A4PQ8NGN8 299 aa1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 ABHD3Q8WU67 409 aa1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 NRGNQ92686 78 aa1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 FRZBQ92765 325 aa1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 SLC38A4Q969I6 547 aa1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 TM4SF18Q96CE8 201 aa1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 ZNF578Q96N58 590 aaPredicted RBP1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 NDFIP1Q9BT67 221 aa1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 UBE2ZQ9H832 354 aaPredicted RBP1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 BEX1Q9HBH7 125 aa1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 ZNF160Q9HCG1 818 aa1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 TMEM9BQ9NQ34 198 aa1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 ZNF355PQ9NSJ1 428 aa1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 HRASLS2Q9NWW9 162 aa1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 ZNF835Q9Y2P0 537 aa1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 TMED5Q9Y3A6 229 aa1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 TSSC4Q9Y5U2 329 aaPredicted RBP1.63□□□□□ -2.15
R3HDM1-219ENST00000488035 NINLQ9Y2I6 1382 aa1.62□□□□□ -2.15
R3HDM1-219ENST00000488035 ANKRD12Q6UB98 2062 aa1.62□□□□□ -2.15
R3HDM1-219ENST00000488035 CTAGE15A4D2H0 777 aa1.62□□□□□ -2.15
R3HDM1-219ENST00000488035 CCDC169A6NNP5 214 aa1.62□□□□□ -2.15
R3HDM1-219ENST00000488035 NCBP2LA6PVI3 153 aaKnown RBP1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms