RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 JAM3Q9BX67 310 aa10.69□□□□□ -0.7
TRA2B-214ENST00000487615 SELENOIQ9C0D9 397 aa10.69□□□□□ -0.7
TRA2B-214ENST00000487615 AUNIPQ9H7T9 357 aa10.69□□□□□ -0.7
TRA2B-214ENST00000487615 RAB22AQ9UL26 194 aa10.69□□□□□ -0.7
TRA2B-214ENST00000487615 MRPS28Q9Y2Q9 187 aaKnown RBP10.69□□□□□ -0.7
TRA2B-214ENST00000487615 FRMPD3Q5JV73 1810 aa10.69□□□□□ -0.7
TRA2B-214ENST00000487615 ZSCAN5BA6NJL1 495 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 SLC2A1P11166 492 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 UQCRC1P31930 480 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 DEFA5Q01523 94 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 TNK1Q13470 666 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 GUSBP11Q6P575 273 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 AAED1Q7RTV5 226 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 COMTD1Q86VU5 262 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 PDZD9Q8IXQ8 264 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 AICDAQ9GZX7 198 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 MCTS1Q9ULC4 181 aaKnown RBP10.68□□□□□ -0.7
TRA2B-214ENST00000487615 RP1L1Q8IWN7 2480 aaPredicted RBP10.68□□□□□ -0.7
TRA2B-214ENST00000487615 NAGAP17050 411 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 TCN2P20062 427 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 THEM4Q5T1C6 240 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 C3P1Q6ZMU1 363 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 CREB3L2Q70SY1 520 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 STEAP2Q8NFT2 490 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 MFSD8Q8NHS3 518 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 RNF32Q9H0A6 362 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 RHBDD3Q9Y3P4 386 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 ARHGEF17Q96PE2 2063 aaPredicted RBP10.68□□□□□ -0.7
TRA2B-214ENST00000487615 FAM230AA0A1W2PPH8 454 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 GGT3PA6NGU5 568 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 VAMP5O95183 116 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 PVALBP20472 110 aaPredicted RBP10.68□□□□□ -0.7
TRA2B-214ENST00000487615 SERPINA2P20848 420 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 GPR85P60893 370 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 PCBD1P61457 104 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 VAMP2P63027 116 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 MRPL49Q13405 166 aaKnown RBP10.68□□□□□ -0.7
TRA2B-214ENST00000487615 HLA-BQ31612 363 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 NPEPL1Q8NDH3 523 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 GJC3Q8NFK1 279 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 OR56B1Q8NGI3 324 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 GPR119Q8TDV5 335 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 DVL3Q92997 716 aaPredicted RBP10.68□□□□□ -0.7
TRA2B-214ENST00000487615 TSPAN32Q96QS1 320 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 SLC22A11Q9NSA0 550 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 ASH2LQ9UBL3 628 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 KCNN3Q9UGI6 736 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 R4GMQ9 66 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 A0A0A6YYJ9 748 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 A6NCN8 305 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 IFI6P09912 130 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 MSL3P1P0C860 447 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 GZMKP49863 264 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 MFAP5Q13361 173 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 CNN3Q15417 329 aaKnown RBP10.68□□□□□ -0.7
TRA2B-214ENST00000487615 ISXQ2M1V0 245 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 COL13A1Q5TAT6 717 aaPredicted RBP10.68□□□□□ -0.7
TRA2B-214ENST00000487615 CFAP77Q6ZQR2 320 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 PGAP1Q75T13 922 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 RAB3CQ96E17 227 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 CMTM3Q96MX0 182 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 SLC25A21Q9BQT8 299 aaPredicted RBP10.68□□□□□ -0.7
TRA2B-214ENST00000487615 ENKD1Q9H0I2 346 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 HRASLSQ9HDD0 168 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 OR2S2Q9NQN1 319 aa10.68□□□□□ -0.7
TRA2B-214ENST00000487615 TMEM184BQ9Y519 407 aaPredicted RBP10.68□□□□□ -0.7
TRA2B-214ENST00000487615 HSPA12AO43301 675 aa10.67□□□□□ -0.7
TRA2B-214ENST00000487615 KNG1P01042 644 aa10.67□□□□□ -0.7
TRA2B-214ENST00000487615 IGKV1D-16P01601 117 aa10.67□□□□□ -0.7
TRA2B-214ENST00000487615 LAP3P28838 519 aa10.67□□□□□ -0.7
TRA2B-214ENST00000487615 RAB2AP61019 212 aa10.67□□□□□ -0.7
TRA2B-214ENST00000487615 GRB2P62993 217 aaKnown RBP10.67□□□□□ -0.7
TRA2B-214ENST00000487615 PMPCAQ10713 525 aa10.67□□□□□ -0.7
TRA2B-214ENST00000487615 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.67□□□□□ -0.7
TRA2B-214ENST00000487615 RHBDD2Q6NTF9 364 aa10.67□□□□□ -0.7
TRA2B-214ENST00000487615 D2HGDHQ8N465 521 aa10.67□□□□□ -0.7
TRA2B-214ENST00000487615 OR6F1Q8NGZ6 308 aa10.67□□□□□ -0.7
TRA2B-214ENST00000487615 PTPMT1Q8WUK0 201 aaPredicted RBP10.67□□□□□ -0.7
TRA2B-214ENST00000487615 APOBEC4Q8WW27 367 aaKnown RBP10.67□□□□□ -0.7
TRA2B-214ENST00000487615 SPACA9Q96E40 222 aaPredicted RBP10.67□□□□□ -0.7
TRA2B-214ENST00000487615 ZNF436Q9C0F3 470 aaPredicted RBP10.67□□□□□ -0.7
TRA2B-214ENST00000487615 TAS2R3Q9NYW6 316 aa10.67□□□□□ -0.7
TRA2B-214ENST00000487615 KLHL13Q9P2N7 655 aa10.67□□□□□ -0.7
TRA2B-214ENST00000487615 ZNF223Q9UK11 482 aaPredicted RBP10.67□□□□□ -0.7
TRA2B-214ENST00000487615 FTCDNL1E5RQL4 147 aa10.67□□□□□ -0.7
TRA2B-214ENST00000487615 PTP4A3O75365 173 aa10.67□□□□□ -0.7
TRA2B-214ENST00000487615 BCKDHBP21953 392 aa10.67□□□□□ -0.7
TRA2B-214ENST00000487615 ARHGDIBP52566 201 aa10.67□□□□□ -0.7
TRA2B-214ENST00000487615 DBPQ10586 325 aaPredicted RBP10.67□□□□□ -0.7
TRA2B-214ENST00000487615 ZNF79Q15937 498 aa10.67□□□□□ -0.7
TRA2B-214ENST00000487615 COMMD7Q86VX2 200 aa10.67□□□□□ -0.7
TRA2B-214ENST00000487615 OR51S1Q8NGJ8 323 aa10.67□□□□□ -0.7
TRA2B-214ENST00000487615 ANKRD10Q9NXR5 420 aa10.67□□□□□ -0.7
TRA2B-214ENST00000487615 OGG1O15527 345 aa10.67□□□□□ -0.7
TRA2B-214ENST00000487615 SPDEFO95238 335 aa10.67□□□□□ -0.7
TRA2B-214ENST00000487615 DDAH2O95865 285 aa10.67□□□□□ -0.7
TRA2B-214ENST00000487615 LPLP06858 475 aa10.67□□□□□ -0.7
TRA2B-214ENST00000487615 QDPRP09417 244 aa10.67□□□□□ -0.7
TRA2B-214ENST00000487615 SKP2Q13309 424 aa10.67□□□□□ -0.7
TRA2B-214ENST00000487615 TMEM81Q6P7N7 255 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms