RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 BEND6Q5SZJ8 279 aaPredicted RBP13.64□□□□□ -0.23
SRRT-212ENST00000487311 ZNF774Q6NX45 483 aa13.64□□□□□ -0.23
SRRT-212ENST00000487311 SHISA2Q6UWI4 295 aa13.64□□□□□ -0.23
SRRT-212ENST00000487311 TREML1Q86YW5 311 aa13.64□□□□□ -0.23
SRRT-212ENST00000487311 TMEM239Q8WW34 195 aa13.64□□□□□ -0.23
SRRT-212ENST00000487311 C4orf45Q96LM5 186 aa13.64□□□□□ -0.23
SRRT-212ENST00000487311 TXNIPQ9H3M7 391 aa13.64□□□□□ -0.23
SRRT-212ENST00000487311 SMURF2Q9HAU4 748 aa13.64□□□□□ -0.23
SRRT-212ENST00000487311 CYSLTR2Q9NS75 346 aa13.64□□□□□ -0.23
SRRT-212ENST00000487311 NUP50Q9UKX7 468 aa13.64□□□□□ -0.23
SRRT-212ENST00000487311 ZDHHC8Q9ULC8 765 aa13.64□□□□□ -0.23
SRRT-212ENST00000487311 POLR3KQ9Y2Y1 108 aaPredicted RBP13.64□□□□□ -0.23
SRRT-212ENST00000487311 DNAJC9-AS1A6NH13 148 aa13.63□□□□□ -0.23
SRRT-212ENST00000487311 LIPAP38571 399 aa13.63□□□□□ -0.23
SRRT-212ENST00000487311 RBM34P42696 430 aaKnown RBP13.63□□□□□ -0.23
SRRT-212ENST00000487311 TAS2R41P59536 307 aa13.63□□□□□ -0.23
SRRT-212ENST00000487311 TNFAIP6P98066 277 aaPredicted RBP13.63□□□□□ -0.23
SRRT-212ENST00000487311 TOP3AQ13472 1001 aaPredicted RBP13.63□□□□□ -0.23
SRRT-212ENST00000487311 NFYCQ13952 458 aa13.63□□□□□ -0.23
SRRT-212ENST00000487311 ENDOGQ14249 297 aaKnown RBP13.63□□□□□ -0.23
SRRT-212ENST00000487311 Q6ZR03 302 aa13.63□□□□□ -0.23
SRRT-212ENST00000487311 JAZF1Q86VZ6 243 aa13.63□□□□□ -0.23
SRRT-212ENST00000487311 LRRC28Q86X40 367 aaPredicted RBP13.63□□□□□ -0.23
SRRT-212ENST00000487311 SLC30A8Q8IWU4 369 aa13.63□□□□□ -0.23
SRRT-212ENST00000487311 POP5Q969H6 163 aaKnown RBP13.63□□□□□ -0.23
SRRT-212ENST00000487311 SIGLEC11Q96RL6 698 aa13.63□□□□□ -0.23
SRRT-212ENST00000487311 PATZ1Q9HBE1 687 aaKnown RBP13.63□□□□□ -0.23
SRRT-212ENST00000487311 TMEM106BQ9NUM4 274 aa13.63□□□□□ -0.23
SRRT-212ENST00000487311 PLEK2Q9NYT0 353 aa13.63□□□□□ -0.23
SRRT-212ENST00000487311 TIMM10BQ9Y5J6 103 aa13.63□□□□□ -0.23
SRRT-212ENST00000487311 INSIG2Q9Y5U4 225 aa13.63□□□□□ -0.23
SRRT-212ENST00000487311 AUP1Q9Y679 476 aa13.63□□□□□ -0.23
SRRT-212ENST00000487311 FBP2O00757 339 aa13.62□□□□□ -0.23
SRRT-212ENST00000487311 ANGPT2O15123 496 aa13.62□□□□□ -0.23
SRRT-212ENST00000487311 ICMTO60725 284 aa13.62□□□□□ -0.23
SRRT-212ENST00000487311 IGF2P01344 180 aa13.62□□□□□ -0.23
SRRT-212ENST00000487311 CST2P09228 141 aa13.62□□□□□ -0.23
SRRT-212ENST00000487311 ZNF12P17014 697 aa13.62□□□□□ -0.23
SRRT-212ENST00000487311 FHL1Q13642 323 aa13.62□□□□□ -0.23
SRRT-212ENST00000487311 MTX3Q5HYI7 312 aa13.62□□□□□ -0.23
SRRT-212ENST00000487311 NANOGP8Q6NSW7 305 aa13.62□□□□□ -0.23
SRRT-212ENST00000487311 RBMS3Q6XE24 437 aaKnown RBP13.62□□□□□ -0.23
SRRT-212ENST00000487311 HDDC2Q7Z4H3 204 aa13.62□□□□□ -0.23
SRRT-212ENST00000487311 IGFN1Q86VF2 1251 aa13.62□□□□□ -0.23
SRRT-212ENST00000487311 ZNF283Q8N7M2 679 aa13.62□□□□□ -0.23
SRRT-212ENST00000487311 LRRC75AQ8NAA5 344 aa13.62□□□□□ -0.23
SRRT-212ENST00000487311 RABEP2Q9H5N1 569 aa13.62□□□□□ -0.23
SRRT-212ENST00000487311 UNKLQ9H9P5 680 aaKnown RBP13.62□□□□□ -0.23
SRRT-212ENST00000487311 NPIPB13A6NJU9 1138 aa13.61□□□□□ -0.23
SRRT-212ENST00000487311 NPIPB4C9JG80 1138 aa13.61□□□□□ -0.23
SRRT-212ENST00000487311 TIMM8AO60220 97 aaPredicted RBP13.61□□□□□ -0.23
SRRT-212ENST00000487311 OR5F1O95221 314 aa13.61□□□□□ -0.23
SRRT-212ENST00000487311 IGHMP01871 453 aa13.61□□□□□ -0.23
SRRT-212ENST00000487311 CD80P33681 288 aa13.61□□□□□ -0.23
SRRT-212ENST00000487311 CTXN1P60606 82 aa13.61□□□□□ -0.23
SRRT-212ENST00000487311 RPL27P61353 136 aaKnown RBP13.61□□□□□ -0.23
SRRT-212ENST00000487311 BAMBIQ13145 260 aa13.61□□□□□ -0.23
SRRT-212ENST00000487311 ZMYND11Q15326 602 aa13.61□□□□□ -0.23
SRRT-212ENST00000487311 ALG10Q5BKT4 473 aa13.61□□□□□ -0.23
SRRT-212ENST00000487311 ARMCX4Q5H9R4 360 aa13.61□□□□□ -0.23
SRRT-212ENST00000487311 RABL3Q5HYI8 236 aa13.61□□□□□ -0.23
SRRT-212ENST00000487311 INTS11Q5TA45 600 aaKnown RBP13.61□□□□□ -0.23
SRRT-212ENST00000487311 AGBL2Q5U5Z8 902 aa13.61□□□□□ -0.23
SRRT-212ENST00000487311 FOXL2NBQ6ZUU3 175 aa13.61□□□□□ -0.23
SRRT-212ENST00000487311 CALHM3Q86XJ0 350 aa13.61□□□□□ -0.23
SRRT-212ENST00000487311 ALDH16A1Q8IZ83 802 aa13.61□□□□□ -0.23
SRRT-212ENST00000487311 OR2Z1Q8NG97 314 aa13.61□□□□□ -0.23
SRRT-212ENST00000487311 SAMD8Q96LT4 415 aa13.61□□□□□ -0.23
SRRT-212ENST00000487311 RBP7Q96R05 134 aa13.61□□□□□ -0.23
SRRT-212ENST00000487311 DIRC2Q96SL1 478 aa13.61□□□□□ -0.23
SRRT-212ENST00000487311 ALG12Q9BV10 488 aa13.61□□□□□ -0.23
SRRT-212ENST00000487311 ELOVL3Q9HB03 270 aa13.61□□□□□ -0.23
SRRT-212ENST00000487311 STX18Q9P2W9 335 aaKnown RBP13.61□□□□□ -0.23
SRRT-212ENST00000487311 HIF3AQ9Y2N7 669 aa13.61□□□□□ -0.23
SRRT-212ENST00000487311 STARD10Q9Y365 291 aa13.61□□□□□ -0.23
SRRT-212ENST00000487311 MED31Q9Y3C7 131 aa13.61□□□□□ -0.23
SRRT-212ENST00000487311 IGHV3OR16-10A0A075B7F0 116 aa13.6□□□□□ -0.23
SRRT-212ENST00000487311 F5H0A9 414 aaPredicted RBP13.6□□□□□ -0.23
SRRT-212ENST00000487311 IGHV4-38-2P0DP08 117 aa13.6□□□□□ -0.23
SRRT-212ENST00000487311 ERFP50548 548 aa13.6□□□□□ -0.23
SRRT-212ENST00000487311 DEFA6Q01524 100 aa13.6□□□□□ -0.23
SRRT-212ENST00000487311 PAX8Q06710 450 aa13.6□□□□□ -0.23
SRRT-212ENST00000487311 TAF11Q15544 211 aa13.6□□□□□ -0.23
SRRT-212ENST00000487311 TMEM155Q4W5P6 130 aa13.6□□□□□ -0.23
SRRT-212ENST00000487311 OTPQ5XKR4 325 aa13.6□□□□□ -0.23
SRRT-212ENST00000487311 TREML4Q6UXN2 200 aa13.6□□□□□ -0.23
SRRT-212ENST00000487311 UNQ6126/PRO20091Q6UXV3 157 aa13.6□□□□□ -0.23
SRRT-212ENST00000487311 C1orf174Q8IYL3 243 aa13.6□□□□□ -0.23
SRRT-212ENST00000487311 MICU2Q8IYU8 434 aa13.6□□□□□ -0.23
SRRT-212ENST00000487311 KLHL36Q8N4N3 616 aa13.6□□□□□ -0.23
SRRT-212ENST00000487311 ITLN1Q8WWA0 313 aa13.6□□□□□ -0.23
SRRT-212ENST00000487311 RASSF5Q8WWW0 418 aa13.6□□□□□ -0.23
SRRT-212ENST00000487311 CMBLQ96DG6 245 aa13.6□□□□□ -0.23
SRRT-212ENST00000487311 CGGBP1Q9UFW8 167 aaPredicted RBP13.6□□□□□ -0.23
SRRT-212ENST00000487311 A0A1W2PPL8 197 aa13.59□□□□□ -0.23
SRRT-212ENST00000487311 H3BSA7 217 aa13.59□□□□□ -0.23
SRRT-212ENST00000487311 H7C1C5 153 aa13.59□□□□□ -0.23
SRRT-212ENST00000487311 ZNF205O95201 554 aa13.59□□□□□ -0.23
SRRT-212ENST00000487311 RNASE1P07998 156 aaKnown RBP13.59□□□□□ -0.23
SRRT-212ENST00000487311 ARHGDIAP52565 204 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms