RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 DHDDSQ86SQ9 333 aa16.9■□□□□ 0.3
PHF1-208ENST00000486845 SLC26A7Q8TE54 656 aa16.9■□□□□ 0.3
PHF1-208ENST00000486845 NSMAFQ92636 917 aa16.9■□□□□ 0.3
PHF1-208ENST00000486845 SGTBQ96EQ0 304 aa16.9■□□□□ 0.3
PHF1-208ENST00000486845 ZNF48Q96MX3 618 aaPredicted RBP16.9■□□□□ 0.3
PHF1-208ENST00000486845 EBF4Q9BQW3 602 aa16.9■□□□□ 0.3
PHF1-208ENST00000486845 OR2H1Q9GZK4 316 aa16.9■□□□□ 0.3
PHF1-208ENST00000486845 SLITRK2Q9H156 845 aa16.9■□□□□ 0.3
PHF1-208ENST00000486845 NANOGQ9H9S0 305 aa16.9■□□□□ 0.3
PHF1-208ENST00000486845 DCAF16Q9NXF7 216 aa16.9■□□□□ 0.3
PHF1-208ENST00000486845 RAB21Q9UL25 225 aa16.9■□□□□ 0.3
PHF1-208ENST00000486845 A8MXK9 166 aa16.89■□□□□ 0.29
PHF1-208ENST00000486845 IGF2P01344 180 aa16.89■□□□□ 0.29
PHF1-208ENST00000486845 TNFRSF1AP19438 455 aa16.89■□□□□ 0.29
PHF1-208ENST00000486845 RBM34P42696 430 aaKnown RBP16.89■□□□□ 0.29
PHF1-208ENST00000486845 PCBD1P61457 104 aa16.89■□□□□ 0.29
PHF1-208ENST00000486845 CDK5R2Q13319 367 aa16.89■□□□□ 0.29
PHF1-208ENST00000486845 INTS11Q5TA45 600 aaKnown RBP16.89■□□□□ 0.29
PHF1-208ENST00000486845 ARL9Q6T311 187 aa16.89■□□□□ 0.29
PHF1-208ENST00000486845 ZNF283Q8N7M2 679 aa16.89■□□□□ 0.29
PHF1-208ENST00000486845 PFN4Q8NHR9 129 aa16.89■□□□□ 0.29
PHF1-208ENST00000486845 RASSF5Q8WWW0 418 aa16.89■□□□□ 0.29
PHF1-208ENST00000486845 HDAC2Q92769 488 aaKnown RBP16.89■□□□□ 0.29
PHF1-208ENST00000486845 TAMM41Q96BW9 452 aa16.89■□□□□ 0.29
PHF1-208ENST00000486845 MS4A7Q9GZW8 240 aaPredicted RBP16.89■□□□□ 0.29
PHF1-208ENST00000486845 WNT5BQ9H1J7 359 aa16.89■□□□□ 0.29
PHF1-208ENST00000486845 OR5V1Q9UGF6 321 aa16.89■□□□□ 0.29
PHF1-208ENST00000486845 TIMM10BQ9Y5J6 103 aa16.89■□□□□ 0.29
PHF1-208ENST00000486845 IGKV1D-43A0A0B4J1Z2 117 aa16.88■□□□□ 0.29
PHF1-208ENST00000486845 NGFP01138 241 aa16.88■□□□□ 0.29
PHF1-208ENST00000486845 CST2P09228 141 aa16.88■□□□□ 0.29
PHF1-208ENST00000486845 PCGF2P35227 344 aa16.88■□□□□ 0.29
PHF1-208ENST00000486845 MTNR1AP48039 350 aa16.88■□□□□ 0.29
PHF1-208ENST00000486845 MTPNP58546 118 aa16.88■□□□□ 0.29
PHF1-208ENST00000486845 SEC61A1P61619 476 aaKnown RBP16.88■□□□□ 0.29
PHF1-208ENST00000486845 BTG1P62324 171 aa16.88■□□□□ 0.29
PHF1-208ENST00000486845 ESCO2Q56NI9 601 aa16.88■□□□□ 0.29
PHF1-208ENST00000486845 SLC25A47Q6Q0C1 308 aa16.88■□□□□ 0.29
PHF1-208ENST00000486845 LRRC28Q86X40 367 aaPredicted RBP16.88■□□□□ 0.29
PHF1-208ENST00000486845 MOSPD2Q8NHP6 518 aa16.88■□□□□ 0.29
PHF1-208ENST00000486845 TLCD1Q96CP7 247 aa16.88■□□□□ 0.29
PHF1-208ENST00000486845 C4orf45Q96LM5 186 aa16.88■□□□□ 0.29
PHF1-208ENST00000486845 SAMD8Q96LT4 415 aa16.88■□□□□ 0.29
PHF1-208ENST00000486845 CGREF1Q99674 301 aa16.88■□□□□ 0.29
PHF1-208ENST00000486845 ALG12Q9BV10 488 aa16.88■□□□□ 0.29
PHF1-208ENST00000486845 TXNIPQ9H3M7 391 aa16.88■□□□□ 0.29
PHF1-208ENST00000486845 RABEP2Q9H5N1 569 aa16.88■□□□□ 0.29
PHF1-208ENST00000486845 F5H0A9 414 aaPredicted RBP16.87■□□□□ 0.29
PHF1-208ENST00000486845 TSPAN19P0C672 248 aa16.87■□□□□ 0.29
PHF1-208ENST00000486845 GSTM3P21266 225 aa16.87■□□□□ 0.29
PHF1-208ENST00000486845 LAP3P28838 519 aa16.87■□□□□ 0.29
PHF1-208ENST00000486845 GUCA1AP43080 201 aaPredicted RBP16.87■□□□□ 0.29
PHF1-208ENST00000486845 PSG7Q13046 419 aa16.87■□□□□ 0.29
PHF1-208ENST00000486845 HNRNPA0Q13151 305 aaKnown RBP16.87■□□□□ 0.29
PHF1-208ENST00000486845 SELPLGQ14242 412 aa16.87■□□□□ 0.29
PHF1-208ENST00000486845 SLC9A3R2Q15599 337 aa16.87■□□□□ 0.29
PHF1-208ENST00000486845 MIDNQ504T8 468 aa16.87■□□□□ 0.29
PHF1-208ENST00000486845 DPP10Q8N608 796 aa16.87■□□□□ 0.29
PHF1-208ENST00000486845 NPEPL1Q8NDH3 523 aa16.87■□□□□ 0.29
PHF1-208ENST00000486845 FNDC8Q8TC99 324 aa16.87■□□□□ 0.29
PHF1-208ENST00000486845 TMEM255BQ8WV15 326 aa16.87■□□□□ 0.29
PHF1-208ENST00000486845 LIPHQ8WWY8 451 aa16.87■□□□□ 0.29
PHF1-208ENST00000486845 RBP7Q96R05 134 aa16.87■□□□□ 0.29
PHF1-208ENST00000486845 MAN2C1Q9NTJ4 1040 aa16.87■□□□□ 0.29
PHF1-208ENST00000486845 TUBG1P23258 451 aa16.86■□□□□ 0.29
PHF1-208ENST00000486845 MDH2P40926 338 aaKnown RBP16.86■□□□□ 0.29
PHF1-208ENST00000486845 TAS2R41P59536 307 aa16.86■□□□□ 0.29
PHF1-208ENST00000486845 ZMYND11Q15326 602 aa16.86■□□□□ 0.29
PHF1-208ENST00000486845 ZNF774Q6NX45 483 aa16.86■□□□□ 0.29
PHF1-208ENST00000486845 LEG1Q6P5S2 330 aa16.86■□□□□ 0.29
PHF1-208ENST00000486845 C9orf139Q6ZV77 190 aa16.86■□□□□ 0.29
PHF1-208ENST00000486845 NKAIN4Q8IVV8 208 aa16.86■□□□□ 0.29
PHF1-208ENST00000486845 OR2Z1Q8NG97 314 aa16.86■□□□□ 0.29
PHF1-208ENST00000486845 OR52E2Q8NGJ4 325 aa16.86■□□□□ 0.29
PHF1-208ENST00000486845 TMEM239Q8WW34 195 aa16.86■□□□□ 0.29
PHF1-208ENST00000486845 POLR2J2Q9GZM3 115 aaKnown RBP16.86■□□□□ 0.29
PHF1-208ENST00000486845 POLR2J3Q9H1A7 115 aaKnown RBP16.86■□□□□ 0.29
PHF1-208ENST00000486845 KAT8Q9H7Z6 458 aaKnown RBP16.86■□□□□ 0.29
PHF1-208ENST00000486845 TUBG2Q9NRH3 451 aa16.86■□□□□ 0.29
PHF1-208ENST00000486845 C20orf141Q9NUB4 165 aa16.86■□□□□ 0.29
PHF1-208ENST00000486845 IL20RAQ9UHF4 553 aa16.86■□□□□ 0.29
PHF1-208ENST00000486845 NDRG4Q9ULP0 352 aaKnown RBP16.86■□□□□ 0.29
PHF1-208ENST00000486845 PPP1R3CQ9UQK1 317 aa16.86■□□□□ 0.29
PHF1-208ENST00000486845 LRCH1Q9Y2L9 728 aa16.86■□□□□ 0.29
PHF1-208ENST00000486845 NDUFAF1Q9Y375 327 aa16.86■□□□□ 0.29
PHF1-208ENST00000486845 ANGPT2O15123 496 aa16.85■□□□□ 0.29
PHF1-208ENST00000486845 SURF4O15260 269 aa16.85■□□□□ 0.29
PHF1-208ENST00000486845 OR5F1O95221 314 aa16.85■□□□□ 0.29
PHF1-208ENST00000486845 ABHD16AO95870 558 aa16.85■□□□□ 0.29
PHF1-208ENST00000486845 PPIAL4GP0DN37 164 aa16.85■□□□□ 0.29
PHF1-208ENST00000486845 PAX8Q06710 450 aa16.85■□□□□ 0.29
PHF1-208ENST00000486845 TOP3AQ13472 1001 aaPredicted RBP16.85■□□□□ 0.29
PHF1-208ENST00000486845 FOXL2NBQ6ZUU3 175 aa16.85■□□□□ 0.29
PHF1-208ENST00000486845 MUC20Q8N307 709 aaPredicted RBP16.85■□□□□ 0.29
PHF1-208ENST00000486845 PARP8Q8N3A8 854 aa16.85■□□□□ 0.29
PHF1-208ENST00000486845 LRRC8CQ8TDW0 803 aa16.85■□□□□ 0.29
PHF1-208ENST00000486845 SH3GLB1Q9Y371 365 aa16.85■□□□□ 0.29
PHF1-208ENST00000486845 MED31Q9Y3C7 131 aa16.85■□□□□ 0.29
PHF1-208ENST00000486845 C12orf71A8MTZ7 269 aa16.84■□□□□ 0.29
PHF1-208ENST00000486845 KITLGP21583 273 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms