RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 LOC100289279A0A1B0GTE1 492 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 ETV2O00321 342 aaPredicted RBP16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 NDUFB6O95139 128 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 ALDOBP05062 364 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 CD2P06729 351 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 FBXO45P0C2W1 286 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 FSTP19883 344 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 EMP2P54851 167 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 GNG2P59768 71 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 FMODQ06828 376 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 PCK2Q16822 640 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 C2orf76Q3KRA6 126 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 GLDNQ6ZMI3 551 aaPredicted RBP16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 Q6ZTK2 550 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 OR5L2Q8NGL0 311 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 CKLFQ9UBR5 152 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 RARRES3Q9UL19 164 aa16.11■□□□□ 0.17
PDLIM7-207ENST00000486828 LY6G6EA0A0G2JKS1 128 aa16.1■□□□□ 0.17
PDLIM7-207ENST00000486828 A0A1W2PQM1 296 aa16.1■□□□□ 0.17
PDLIM7-207ENST00000486828 CIB4A0PJX0 185 aa16.1■□□□□ 0.17
PDLIM7-207ENST00000486828 VSTM2BA6NLU5 285 aa16.1■□□□□ 0.17
PDLIM7-207ENST00000486828 ICMTO60725 284 aa16.1■□□□□ 0.17
PDLIM7-207ENST00000486828 IGFBP3P17936 291 aaPredicted RBP16.1■□□□□ 0.17
PDLIM7-207ENST00000486828 FAUP35544 74 aaKnown RBP16.1■□□□□ 0.17
PDLIM7-207ENST00000486828 RAD52P43351 418 aa16.1■□□□□ 0.17
PDLIM7-207ENST00000486828 MECP2P51608 486 aaKnown RBP16.1■□□□□ 0.17
PDLIM7-207ENST00000486828 CCL7P80098 99 aa16.1■□□□□ 0.17
PDLIM7-207ENST00000486828 HSF1Q00613 529 aa16.1■□□□□ 0.17
PDLIM7-207ENST00000486828 TLE3Q04726 772 aa16.1■□□□□ 0.17
PDLIM7-207ENST00000486828 MED30Q96HR3 178 aa16.1■□□□□ 0.17
PDLIM7-207ENST00000486828 NPDC1Q9NQX5 325 aaPredicted RBP16.1■□□□□ 0.17
PDLIM7-207ENST00000486828 TAS2R8Q9NYW2 309 aa16.1■□□□□ 0.17
PDLIM7-207ENST00000486828 U3KQA8 63 aa16.1■□□□□ 0.17
PDLIM7-207ENST00000486828 TSC22D2O75157 780 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 AQP8O94778 261 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 TPOP07202 933 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 DNASE1P24855 282 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 SELENOPP49908 381 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 POU3F1Q03052 451 aaPredicted RBP16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 TOMM20Q15388 145 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 PCGF3Q3KNV8 242 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 ZNF385CQ66K41 422 aaPredicted RBP16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 GLT8D1Q68CQ7 371 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 SLC25A25Q6KCM7 469 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 DCXRQ7Z4W1 244 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 CPEB2Q7Z5Q1 589 aaKnown RBP16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 BIVMQ86UB2 503 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 WDFY1Q8IWB7 410 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 OR1J4Q8NGS1 313 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 ST7LQ8TDW4 575 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 SLC25A28Q96A46 364 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 POTEKPQ9BYX7 375 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 KLRF1Q9NZS2 232 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 PCDHGA5Q9Y5G8 931 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 HRH3Q9Y5N1 445 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 IGHV5-10-1A0A0J9YXX1 117 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 LIPT2A6NK58 231 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 ONECUT2O95948 504 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 CSF1P09603 554 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 CD37P11049 281 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 MSX1P28360 303 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 PER3P56645 1201 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 LYSMD4Q5XG99 296 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 NLRC3Q7RTR2 1065 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 PLPP7Q8NBV4 271 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 SEC22CQ9BRL7 303 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 KCNK15Q9H427 330 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 FANCFQ9NPI8 374 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 G6PC2Q9NQR9 355 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 PRMT8Q9NR22 394 aaPredicted RBP16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 ALKBH4Q9NXW9 302 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 TAS2R4Q9NYW5 299 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 PPP4R1LQ9P1A2 415 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 EMC9Q9Y3B6 208 aa16.09■□□□□ 0.17
PDLIM7-207ENST00000486828 TMEM272A0A1B0GTI8 110 aa16.08■□□□□ 0.16
PDLIM7-207ENST00000486828 IL5P05113 134 aa16.08■□□□□ 0.16
PDLIM7-207ENST00000486828 ISG15P05161 165 aa16.08■□□□□ 0.16
PDLIM7-207ENST00000486828 CPN1P15169 458 aa16.08■□□□□ 0.16
PDLIM7-207ENST00000486828 ACHEP22303 614 aa16.08■□□□□ 0.16
PDLIM7-207ENST00000486828 SLC25A53Q5H9E4 307 aa16.08■□□□□ 0.16
PDLIM7-207ENST00000486828 ZBTB37Q5TC79 503 aa16.08■□□□□ 0.16
PDLIM7-207ENST00000486828 SLC25A44Q96H78 314 aaPredicted RBP16.08■□□□□ 0.16
PDLIM7-207ENST00000486828 C5orf34Q96MH7 638 aa16.08■□□□□ 0.16
PDLIM7-207ENST00000486828 METTL17Q9H7H0 456 aaPredicted RBP16.08■□□□□ 0.16
PDLIM7-207ENST00000486828 MED29Q9NX70 200 aa16.08■□□□□ 0.16
PDLIM7-207ENST00000486828 ELF5Q9UKW6 265 aaPredicted RBP16.08■□□□□ 0.16
PDLIM7-207ENST00000486828 HHLA2Q9UM44 414 aa16.08■□□□□ 0.16
PDLIM7-207ENST00000486828 B3GALT5Q9Y2C3 310 aa16.08■□□□□ 0.16
PDLIM7-207ENST00000486828 ADAMTS9Q9P2N4 1935 aa16.08■□□□□ 0.16
PDLIM7-207ENST00000486828 TRAV18A0A075B6X5 111 aa16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 IGKV1D-43A0A0B4J1Z2 117 aa16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 SHISA8B8ZZ34 492 aa16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 KDM4BO94953 1096 aa16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 HRGP04196 525 aa16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 ANXA7P20073 488 aaKnown RBP16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 DHPSP49366 369 aaPredicted RBP16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 ZNF41P51814 821 aaPredicted RBP16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 DEGS2Q6QHC5 323 aa16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 LYPD8Q6UX82 237 aa16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 LINC00346Q8IVM7 164 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms