RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 PYY3Q5JQD4 70 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 ASPHD2Q6ICH7 369 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 PAPD4Q6PIY7 484 aaKnown RBP9.61□□□□□ -0.87
CCDC171-208ENST00000486641 BTNL8Q6UX41 500 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 C17orf99Q6UX52 265 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 DMRTC2Q8IXT2 367 aaPredicted RBP9.61□□□□□ -0.87
CCDC171-208ENST00000486641 FAM24BQ8N5W8 94 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 TSEN15Q8WW01 171 aaKnown RBP9.61□□□□□ -0.87
CCDC171-208ENST00000486641 IRF7Q92985 503 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 RHOVQ96L33 236 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 INSM2Q96T92 566 aaPredicted RBP9.61□□□□□ -0.87
CCDC171-208ENST00000486641 SLC17A9Q9BYT1 436 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 TUBA4BQ9H853 241 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 SRA1Q9HD15 236 aaKnown RBP9.61□□□□□ -0.87
CCDC171-208ENST00000486641 KCNG2Q9UJ96 466 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 WIF1Q9Y5W5 379 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 TMEM212A6NML5 194 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 DBX1A6NMT0 343 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 EIF1AYO14602 144 aaKnown RBP9.61□□□□□ -0.87
CCDC171-208ENST00000486641 ARPC3O15145 178 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 OIP5O43482 229 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 LRP3O75074 770 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 SERPINA5P05154 406 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 HOXC4P09017 264 aaPredicted RBP9.61□□□□□ -0.87
CCDC171-208ENST00000486641 SLC35G4P0C7Q5 338 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 TACR3P29371 465 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 CCKBRP32239 447 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 KIR3DL2P43630 455 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 EIF1AXP47813 144 aaKnown RBP9.61□□□□□ -0.87
CCDC171-208ENST00000486641 DVL1P1P54792 670 aaPredicted RBP9.61□□□□□ -0.87
CCDC171-208ENST00000486641 ADAM8P78325 824 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 DPTQ07507 201 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 PMPCAQ10713 525 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 SKP2Q13309 424 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 AWAT1Q58HT5 328 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 FHL5Q5TD97 284 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 ZNF765Q7L2R6 523 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 CDC20BQ86Y33 519 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 SHISA5Q8N114 240 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 ZNF383Q8NA42 475 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 TET1Q8NFU7 2136 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 PHOSPHO2Q8TCD6 241 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 C14orf144Q96I85 54 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 PRRT1Q99946 306 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 C20orf24Q9BUV8 137 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 SYT4Q9H2B2 425 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 SLCO5A1Q9H2Y9 848 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 C19orf53Q9UNZ5 99 aaPredicted RBP9.61□□□□□ -0.87
CCDC171-208ENST00000486641 TMEM235A6NFC5 223 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 C2orf74A8MZ97 194 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 DCTN6O00399 190 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 BRINP1O60477 761 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 YIF1AO95070 293 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 NME1P15531 152 aaKnown RBP9.6□□□□□ -0.87
CCDC171-208ENST00000486641 GABRA3P34903 492 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 TOMM20Q15388 145 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 ZNF584Q8IVC4 421 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 ARRDC1Q8N5I2 433 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 PPP1R14AQ96A00 147 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 ARRDC3Q96B67 414 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 ZDHHC12Q96GR4 267 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 NMES1Q9C002 83 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 FN3KRPQ9HA64 309 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 SDHAF3Q9NRP4 125 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 TMEM74BQ9NUR3 256 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 SLC2A8Q9NY64 477 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 PLA2G2EQ9NZK7 142 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 OR5AC2Q9NZP5 309 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 LAMP5Q9UJQ1 280 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 FBXL21Q9UKT6 434 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.6□□□□□ -0.87
CCDC171-208ENST00000486641 IFITM10A6NMD0 228 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 LATO43561 262 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 STK17BO94768 372 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 DUS4LO95620 317 aaKnown RBP9.6□□□□□ -0.87
CCDC171-208ENST00000486641 SOD2P04179 222 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 ARG1P05089 322 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 ZNF888P0CJ79 500 aaPredicted RBP9.6□□□□□ -0.87
CCDC171-208ENST00000486641 ITGA3P26006 1051 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 TSFMP43897 325 aaKnown RBP9.6□□□□□ -0.87
CCDC171-208ENST00000486641 ARRB1P49407 418 aaPredicted RBP9.6□□□□□ -0.87
CCDC171-208ENST00000486641 RAB5CP51148 216 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 RAB28P51157 221 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 MEF2DQ14814 521 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 EXOSC7Q15024 291 aaKnown RBP9.6□□□□□ -0.87
CCDC171-208ENST00000486641 SLC22A6Q4U2R8 563 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 RNASE10Q5GAN6 216 aaKnown RBP9.6□□□□□ -0.87
CCDC171-208ENST00000486641 WDR38Q5JTN6 314 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 TEX30Q5JUR7 227 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 EXOSC6Q5RKV6 272 aaKnown RBP9.6□□□□□ -0.87
CCDC171-208ENST00000486641 LY6G5CQ5SRR4 150 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 GLYATL3Q5SZD4 288 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 KIRREL2Q6UWL6 708 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 PPP1R3BQ86XI6 285 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 FAM219AQ8IW50 185 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 RAB42Q8N4Z0 105 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 GVQW1Q8N7I0 195 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 ZDHHC22Q8N966 263 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 EXD3Q8N9H8 876 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 OR10H5Q8NGA6 315 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms