RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 GPR139Q6DWJ6 353 aa15.75■□□□□ 0.11
PRPF40A-209ENST00000486100 C16orf89Q6UX73 402 aa15.75■□□□□ 0.11
PRPF40A-209ENST00000486100 C1orf174Q8IYL3 243 aa15.75■□□□□ 0.11
PRPF40A-209ENST00000486100 ICA1LQ8NDH6 482 aa15.75■□□□□ 0.11
PRPF40A-209ENST00000486100 RSRC1Q96IZ7 334 aaKnown RBP15.75■□□□□ 0.11
PRPF40A-209ENST00000486100 NSMCE2Q96MF7 247 aa15.75■□□□□ 0.11
PRPF40A-209ENST00000486100 GPX7Q96SL4 187 aaPredicted RBP15.75■□□□□ 0.11
PRPF40A-209ENST00000486100 NDE1Q9NXR1 346 aa15.75■□□□□ 0.11
PRPF40A-209ENST00000486100 LPAR3Q9UBY5 353 aa15.75■□□□□ 0.11
PRPF40A-209ENST00000486100 V9GYQ6 96 aa15.75■□□□□ 0.11
PRPF40A-209ENST00000486100 CHD3Q12873 2000 aaKnown RBP15.74■□□□□ 0.11
PRPF40A-209ENST00000486100 TEX13CA0A0J9YWL9 993 aa15.74■□□□□ 0.11
PRPF40A-209ENST00000486100 UNC119BA6NIH7 251 aa15.74■□□□□ 0.11
PRPF40A-209ENST00000486100 TGFAP01135 160 aa15.74■□□□□ 0.11
PRPF40A-209ENST00000486100 IGHV3-13P01766 116 aa15.74■□□□□ 0.11
PRPF40A-209ENST00000486100 FAM157CP0CG43 387 aa15.74■□□□□ 0.11
PRPF40A-209ENST00000486100 SDHAP31040 664 aa15.74■□□□□ 0.11
PRPF40A-209ENST00000486100 WNT5AP41221 380 aa15.74■□□□□ 0.11
PRPF40A-209ENST00000486100 TMEM33P57088 247 aa15.74■□□□□ 0.11
PRPF40A-209ENST00000486100 ZNF718Q3SXZ3 478 aa15.74■□□□□ 0.11
PRPF40A-209ENST00000486100 SPATS1Q496A3 300 aa15.74■□□□□ 0.11
PRPF40A-209ENST00000486100 ZNF774Q6NX45 483 aa15.74■□□□□ 0.11
PRPF40A-209ENST00000486100 TMEM154Q6P9G4 183 aa15.74■□□□□ 0.11
PRPF40A-209ENST00000486100 THSD4Q6ZMP0 1018 aa15.74■□□□□ 0.11
PRPF40A-209ENST00000486100 DPY19L2P2Q6ZN68 376 aa15.74■□□□□ 0.11
PRPF40A-209ENST00000486100 ZNF101Q8IZC7 436 aa15.74■□□□□ 0.11
PRPF40A-209ENST00000486100 SNX33Q8WV41 574 aa15.74■□□□□ 0.11
PRPF40A-209ENST00000486100 MCUR1Q96AQ8 359 aa15.74■□□□□ 0.11
PRPF40A-209ENST00000486100 GPA33Q99795 319 aa15.74■□□□□ 0.11
PRPF40A-209ENST00000486100 SOX7Q9BT81 388 aa15.74■□□□□ 0.11
PRPF40A-209ENST00000486100 SHARPINQ9H0F6 387 aa15.74■□□□□ 0.11
PRPF40A-209ENST00000486100 NKIRAS2Q9NYR9 191 aa15.74■□□□□ 0.11
PRPF40A-209ENST00000486100 IER3IP1Q9Y5U9 82 aa15.74■□□□□ 0.11
PRPF40A-209ENST00000486100 ARPC2O15144 300 aa15.73■□□□□ 0.11
PRPF40A-209ENST00000486100 ICMTO60725 284 aa15.73■□□□□ 0.11
PRPF40A-209ENST00000486100 NCR1O76036 304 aa15.73■□□□□ 0.11
PRPF40A-209ENST00000486100 GADD45GO95257 159 aa15.73■□□□□ 0.11
PRPF40A-209ENST00000486100 CTLA4P16410 223 aa15.73■□□□□ 0.11
PRPF40A-209ENST00000486100 IGFBP5P24593 272 aa15.73■□□□□ 0.11
PRPF40A-209ENST00000486100 GCH1P30793 250 aa15.73■□□□□ 0.11
PRPF40A-209ENST00000486100 MAGEB1P43366 347 aa15.73■□□□□ 0.11
PRPF40A-209ENST00000486100 MNAT1P51948 309 aa15.73■□□□□ 0.11
PRPF40A-209ENST00000486100 FXYD6P3P58550 94 aa15.73■□□□□ 0.11
PRPF40A-209ENST00000486100 KRR1Q13601 381 aaKnown RBP15.73■□□□□ 0.11
PRPF40A-209ENST00000486100 TRIP10Q15642 601 aa15.73■□□□□ 0.11
PRPF40A-209ENST00000486100 PCGF3Q3KNV8 242 aa15.73■□□□□ 0.11
PRPF40A-209ENST00000486100 UGT2A3Q6UWM9 527 aa15.73■□□□□ 0.11
PRPF40A-209ENST00000486100 ZER1Q7Z7L7 766 aa15.73■□□□□ 0.11
PRPF40A-209ENST00000486100 DEFB107AQ8IZN7 70 aa15.73■□□□□ 0.11
PRPF40A-209ENST00000486100 YIPF5Q969M3 257 aa15.73■□□□□ 0.11
PRPF40A-209ENST00000486100 RASD2Q96D21 266 aa15.73■□□□□ 0.11
PRPF40A-209ENST00000486100 MARS2Q96GW9 593 aaKnown RBP15.73■□□□□ 0.11
PRPF40A-209ENST00000486100 SNX18Q96RF0 628 aa15.73■□□□□ 0.11
PRPF40A-209ENST00000486100 EMC7Q9NPA0 242 aa15.73■□□□□ 0.11
PRPF40A-209ENST00000486100 VSX1Q9NZR4 365 aaPredicted RBP15.73■□□□□ 0.11
PRPF40A-209ENST00000486100 IL20RAQ9UHF4 553 aa15.73■□□□□ 0.11
PRPF40A-209ENST00000486100 DNHD1Q96M86 4753 aa15.73■□□□□ 0.11
PRPF40A-209ENST00000486100 YLPM1P49750 1951 aaKnown RBP15.73■□□□□ 0.11
PRPF40A-209ENST00000486100 RTTNQ86VV8 2226 aa15.72■□□□□ 0.11
PRPF40A-209ENST00000486100 SLC16A7O60669 478 aa15.72■□□□□ 0.11
PRPF40A-209ENST00000486100 KHDRBS3O75525 346 aaKnown RBP15.72■□□□□ 0.11
PRPF40A-209ENST00000486100 TXNDC12O95881 172 aa15.72■□□□□ 0.11
PRPF40A-209ENST00000486100 MT-ND5P03915 603 aa15.72■□□□□ 0.11
PRPF40A-209ENST00000486100 FABP3P05413 133 aa15.72■□□□□ 0.11
PRPF40A-209ENST00000486100 COX5BP10606 129 aa15.72■□□□□ 0.11
PRPF40A-209ENST00000486100 IL2RGP31785 369 aa15.72■□□□□ 0.11
PRPF40A-209ENST00000486100 GPR6P46095 362 aaPredicted RBP15.72■□□□□ 0.11
PRPF40A-209ENST00000486100 RPS6KA3P51812 740 aa15.72■□□□□ 0.11
PRPF40A-209ENST00000486100 CCL8P80075 99 aa15.72■□□□□ 0.11
PRPF40A-209ENST00000486100 MXRA7P84157 204 aa15.72■□□□□ 0.11
PRPF40A-209ENST00000486100 SPIBQ01892 262 aa15.72■□□□□ 0.11
PRPF40A-209ENST00000486100 MBNL2Q5VZF2 373 aaKnown RBP15.72■□□□□ 0.11
PRPF40A-209ENST00000486100 SMARCD3Q6STE5 483 aa15.72■□□□□ 0.11
PRPF40A-209ENST00000486100 ADCK1Q86TW2 530 aa15.72■□□□□ 0.11
PRPF40A-209ENST00000486100 SLC25A40Q8TBP6 338 aa15.72■□□□□ 0.11
PRPF40A-209ENST00000486100 C1orf159Q96HA4 380 aa15.72■□□□□ 0.11
PRPF40A-209ENST00000486100 C4orf45Q96LM5 186 aa15.72■□□□□ 0.11
PRPF40A-209ENST00000486100 SYT4Q9H2B2 425 aa15.72■□□□□ 0.11
PRPF40A-209ENST00000486100 ELOVL3Q9HB03 270 aa15.72■□□□□ 0.11
PRPF40A-209ENST00000486100 IL1RAPQ9NPH3 570 aa15.72■□□□□ 0.11
PRPF40A-209ENST00000486100 ZNF275Q9NSD4 429 aaPredicted RBP15.72■□□□□ 0.11
PRPF40A-209ENST00000486100 NDRG4Q9ULP0 352 aaKnown RBP15.72■□□□□ 0.11
PRPF40A-209ENST00000486100 SOCS2O14508 198 aa15.71■□□□□ 0.11
PRPF40A-209ENST00000486100 NGFP01138 241 aa15.71■□□□□ 0.11
PRPF40A-209ENST00000486100 CDKN2AP42771 156 aaKnown RBP15.71■□□□□ 0.11
PRPF40A-209ENST00000486100 SCRN3Q0VDG4 424 aa15.71■□□□□ 0.11
PRPF40A-209ENST00000486100 RFX4Q33E94 735 aa15.71■□□□□ 0.11
PRPF40A-209ENST00000486100 SPATA46Q5T0L3 261 aa15.71■□□□□ 0.11
PRPF40A-209ENST00000486100 ARL9Q6T311 187 aa15.71■□□□□ 0.11
PRPF40A-209ENST00000486100 LINC01356Q8N9X3 169 aa15.71■□□□□ 0.11
PRPF40A-209ENST00000486100 ABHD4Q8TB40 342 aa15.71■□□□□ 0.11
PRPF40A-209ENST00000486100 KLF14Q8TD94 323 aaPredicted RBP15.71■□□□□ 0.11
PRPF40A-209ENST00000486100 CCT8L2Q96SF2 557 aa15.71■□□□□ 0.11
PRPF40A-209ENST00000486100 OR2J1Q9GZK6 312 aa15.71■□□□□ 0.11
PRPF40A-209ENST00000486100 COA3Q9Y2R0 106 aaPredicted RBP15.71■□□□□ 0.11
PRPF40A-209ENST00000486100 IMPA2O14732 288 aa15.7■□□□□ 0.1
PRPF40A-209ENST00000486100 RP2O75695 350 aa15.7■□□□□ 0.1
PRPF40A-209ENST00000486100 MPV17P39210 176 aa15.7■□□□□ 0.1
PRPF40A-209ENST00000486100 ARHGDIAP52565 204 aa15.7■□□□□ 0.1
PRPF40A-209ENST00000486100 PPP1CBP62140 327 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms