RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 TBC1D28Q2M2D7 210 aa6.01□□□□□ -1.45
VPS50-218ENST00000485994 FAM209AQ5JX71 171 aa6.01□□□□□ -1.45
VPS50-218ENST00000485994 GKAP1Q5VSY0 366 aaPredicted RBP6.01□□□□□ -1.45
VPS50-218ENST00000485994 CYB5R2Q6BCY4 276 aa6.01□□□□□ -1.45
VPS50-218ENST00000485994 KRT80Q6KB66 452 aa6.01□□□□□ -1.45
VPS50-218ENST00000485994 RGS7BPQ6MZT1 257 aaPredicted RBP6.01□□□□□ -1.45
VPS50-218ENST00000485994 C1orf94Q6P1W5 598 aa6.01□□□□□ -1.45
VPS50-218ENST00000485994 VHLLQ6RSH7 139 aa6.01□□□□□ -1.45
VPS50-218ENST00000485994 Q71RC1 249 aaPredicted RBP6.01□□□□□ -1.45
VPS50-218ENST00000485994 ZER1Q7Z7L7 766 aa6.01□□□□□ -1.45
VPS50-218ENST00000485994 ADCK1Q86TW2 530 aa6.01□□□□□ -1.45
VPS50-218ENST00000485994 KRTAP19-1Q8IUB9 90 aa6.01□□□□□ -1.45
VPS50-218ENST00000485994 DEFB107AQ8IZN7 70 aa6.01□□□□□ -1.45
VPS50-218ENST00000485994 SVOPLQ8N434 492 aa6.01□□□□□ -1.45
VPS50-218ENST00000485994 LRRC18Q8N456 261 aa6.01□□□□□ -1.45
VPS50-218ENST00000485994 RBM15BQ8NDT2 890 aaKnown RBP6.01□□□□□ -1.45
VPS50-218ENST00000485994 SYNPRQ8TBG9 265 aa6.01□□□□□ -1.45
VPS50-218ENST00000485994 UBASH3BQ8TF42 649 aa6.01□□□□□ -1.45
VPS50-218ENST00000485994 NSMCE2Q96MF7 247 aa6.01□□□□□ -1.45
VPS50-218ENST00000485994 TSPAN32Q96QS1 320 aa6.01□□□□□ -1.45
VPS50-218ENST00000485994 PIMREGQ9BSJ6 248 aa6.01□□□□□ -1.45
VPS50-218ENST00000485994 TRIM15Q9C019 465 aa6.01□□□□□ -1.45
VPS50-218ENST00000485994 CDH20Q9HBT6 801 aa6.01□□□□□ -1.45
VPS50-218ENST00000485994 CCNB1IP1Q9NPC3 277 aa6.01□□□□□ -1.45
VPS50-218ENST00000485994 SLCO1C1Q9NYB5 712 aa6.01□□□□□ -1.45
VPS50-218ENST00000485994 REV1Q9UBZ9 1251 aa6.01□□□□□ -1.45
VPS50-218ENST00000485994 ATPIF1Q9UII2 106 aa6.01□□□□□ -1.45
VPS50-218ENST00000485994 KLHL21Q9UJP4 597 aa6.01□□□□□ -1.45
VPS50-218ENST00000485994 AURKCQ9UQB9 309 aa6.01□□□□□ -1.45
VPS50-218ENST00000485994 MXRA5Q9NR99 2828 aa6□□□□□ -1.45
VPS50-218ENST00000485994 LOC100509620A0A075B734 347 aa6□□□□□ -1.45
VPS50-218ENST00000485994 TEX13CA0A0J9YWL9 993 aa6□□□□□ -1.45
VPS50-218ENST00000485994 TRBV4-1A0A0J9YWV2 114 aa6□□□□□ -1.45
VPS50-218ENST00000485994 SCO2A0A1W2PP80 73 aa6□□□□□ -1.45
VPS50-218ENST00000485994 UNC119BA6NIH7 251 aa6□□□□□ -1.45
VPS50-218ENST00000485994 C12orf71A8MTZ7 269 aa6□□□□□ -1.45
VPS50-218ENST00000485994 A8MV72 311 aaPredicted RBP6□□□□□ -1.45
VPS50-218ENST00000485994 B2RBV5 119 aa6□□□□□ -1.45
VPS50-218ENST00000485994 INAFM1C9JVW0 142 aa6□□□□□ -1.45
VPS50-218ENST00000485994 J3QW42 95 aa6□□□□□ -1.45
VPS50-218ENST00000485994 M0R233 179 aa6□□□□□ -1.45
VPS50-218ENST00000485994 XKRYO14609 159 aa6□□□□□ -1.45
VPS50-218ENST00000485994 ARPC2O15144 300 aa6□□□□□ -1.45
VPS50-218ENST00000485994 GPRIN2O60269 458 aa6□□□□□ -1.45
VPS50-218ENST00000485994 GADD45GO95257 159 aa6□□□□□ -1.45
VPS50-218ENST00000485994 FABP3P05413 133 aa6□□□□□ -1.45
VPS50-218ENST00000485994 ADRA2AP08913 450 aa6□□□□□ -1.45
VPS50-218ENST00000485994 T-ENOLP0DO92 83 aa6□□□□□ -1.45
VPS50-218ENST00000485994 IGHV4-31P0DP07 118 aa6□□□□□ -1.45
VPS50-218ENST00000485994 DAOP14920 347 aa6□□□□□ -1.45
VPS50-218ENST00000485994 ZNF23P17027 643 aa6□□□□□ -1.45
VPS50-218ENST00000485994 HOXB6P17509 224 aaKnown RBP6□□□□□ -1.45
VPS50-218ENST00000485994 CALB2P22676 271 aa6□□□□□ -1.45
VPS50-218ENST00000485994 FPR3P25089 353 aa6□□□□□ -1.45
VPS50-218ENST00000485994 APEX1P27695 318 aaKnown RBP6□□□□□ -1.45
VPS50-218ENST00000485994 CRABP1P29762 137 aa6□□□□□ -1.45
VPS50-218ENST00000485994 RPL4P36578 427 aaKnown RBP6□□□□□ -1.45
VPS50-218ENST00000485994 IFNGR2P38484 337 aa6□□□□□ -1.45
VPS50-218ENST00000485994 MAGEA2P43356 314 aa6□□□□□ -1.45
VPS50-218ENST00000485994 MAP2K3P46734 347 aa6□□□□□ -1.45
VPS50-218ENST00000485994 GSSP48637 474 aa6□□□□□ -1.45
VPS50-218ENST00000485994 RPS6KA3P51812 740 aa6□□□□□ -1.45
VPS50-218ENST00000485994 FMODQ06828 376 aa6□□□□□ -1.45
VPS50-218ENST00000485994 ENDOGQ14249 297 aaKnown RBP6□□□□□ -1.45
VPS50-218ENST00000485994 SEC23BQ15437 767 aa6□□□□□ -1.45
VPS50-218ENST00000485994 SGCAQ16586 387 aa6□□□□□ -1.45
VPS50-218ENST00000485994 RFX4Q33E94 735 aa6□□□□□ -1.45
VPS50-218ENST00000485994 PCGF3Q3KNV8 242 aa6□□□□□ -1.45
VPS50-218ENST00000485994 ZNF718Q3SXZ3 478 aa6□□□□□ -1.45
VPS50-218ENST00000485994 PABPC1L2AQ5JQF8 200 aa6□□□□□ -1.45
VPS50-218ENST00000485994 MBNL2Q5VZF2 373 aaKnown RBP6□□□□□ -1.45
VPS50-218ENST00000485994 PGM2L1Q6PCE3 622 aa6□□□□□ -1.45
VPS50-218ENST00000485994 SMARCD3Q6STE5 483 aa6□□□□□ -1.45
VPS50-218ENST00000485994 ARL9Q6T311 187 aa6□□□□□ -1.45
VPS50-218ENST00000485994 LRP11Q86VZ4 500 aa6□□□□□ -1.45
VPS50-218ENST00000485994 RNF148Q8N7C7 305 aa6□□□□□ -1.45
VPS50-218ENST00000485994 FAM86B1Q8N7N1 296 aa6□□□□□ -1.45
VPS50-218ENST00000485994 MAPK1IP1LQ8NDC0 245 aa6□□□□□ -1.45
VPS50-218ENST00000485994 OR13C2Q8NGS9 318 aa6□□□□□ -1.45
VPS50-218ENST00000485994 IPCEF1Q8WWN9 437 aaPredicted RBP6□□□□□ -1.45
VPS50-218ENST00000485994 HTRA1Q92743 480 aa6□□□□□ -1.45
VPS50-218ENST00000485994 RDH5Q92781 318 aa6□□□□□ -1.45
VPS50-218ENST00000485994 MCUR1Q96AQ8 359 aa6□□□□□ -1.45
VPS50-218ENST00000485994 MARS2Q96GW9 593 aaKnown RBP6□□□□□ -1.45
VPS50-218ENST00000485994 Q96M85 177 aa6□□□□□ -1.45
VPS50-218ENST00000485994 COG8Q96MW5 612 aa6□□□□□ -1.45
VPS50-218ENST00000485994 GPA33Q99795 319 aa6□□□□□ -1.45
VPS50-218ENST00000485994 ZNF416Q9BWM5 594 aa6□□□□□ -1.45
VPS50-218ENST00000485994 OR2H1Q9GZK4 316 aa6□□□□□ -1.45
VPS50-218ENST00000485994 WNT5BQ9H1J7 359 aa6□□□□□ -1.45
VPS50-218ENST00000485994 MAGIXQ9H6Y5 334 aa6□□□□□ -1.45
VPS50-218ENST00000485994 ELOVL3Q9HB03 270 aa6□□□□□ -1.45
VPS50-218ENST00000485994 POLE4Q9NR33 117 aa6□□□□□ -1.45
VPS50-218ENST00000485994 TBCCD1Q9NVR7 557 aa6□□□□□ -1.45
VPS50-218ENST00000485994 EIF3KQ9UBQ5 218 aaKnown RBP6□□□□□ -1.45
VPS50-218ENST00000485994 CGGBP1Q9UFW8 167 aaPredicted RBP6□□□□□ -1.45
VPS50-218ENST00000485994 SVEP1Q4LDE5 3571 aa6□□□□□ -1.45
VPS50-218ENST00000485994 KRTAP4-8A0A0G2JLE6 195 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 C17orf100A8MU93 164 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 KHDRBS3O75525 346 aaKnown RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms