RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 MED29Q9NX70 200 aa14.93□□□□□ -0.02
VIM-205ENST00000485947 HAO2Q9NYQ3 351 aa14.93□□□□□ -0.02
VIM-205ENST00000485947 FKBP7Q9Y680 259 aa14.93□□□□□ -0.02
VIM-205ENST00000485947 CCDC182A6NF36 153 aa14.92□□□□□ -0.02
VIM-205ENST00000485947 PTGES3LE9PB15 166 aa14.92□□□□□ -0.02
VIM-205ENST00000485947 HS3ST1O14792 307 aa14.92□□□□□ -0.02
VIM-205ENST00000485947 RGS10O43665 173 aa14.92□□□□□ -0.02
VIM-205ENST00000485947 TRMUO75648 421 aaKnown RBP14.92□□□□□ -0.02
VIM-205ENST00000485947 IGHG1P01857 330 aa14.92□□□□□ -0.02
VIM-205ENST00000485947 CDK1P06493 297 aa14.92□□□□□ -0.02
VIM-205ENST00000485947 SMIM18P0DKX4 95 aa14.92□□□□□ -0.02
VIM-205ENST00000485947 SPI1P17947 270 aa14.92□□□□□ -0.02
VIM-205ENST00000485947 PAX7P23759 505 aa14.92□□□□□ -0.02
VIM-205ENST00000485947 CRABP1P29762 137 aa14.92□□□□□ -0.02
VIM-205ENST00000485947 KLHL12Q53G59 568 aa14.92□□□□□ -0.02
VIM-205ENST00000485947 NCMAPQ5T1S8 102 aa14.92□□□□□ -0.02
VIM-205ENST00000485947 DNM1P34Q6PK57 102 aa14.92□□□□□ -0.02
VIM-205ENST00000485947 PRSS48Q7RTY5 328 aa14.92□□□□□ -0.02
VIM-205ENST00000485947 STX19Q8N4C7 294 aa14.92□□□□□ -0.02
VIM-205ENST00000485947 TMEM45BQ96B21 275 aa14.92□□□□□ -0.02
VIM-205ENST00000485947 SLC25A44Q96H78 314 aaPredicted RBP14.92□□□□□ -0.02
VIM-205ENST00000485947 TXNDC15Q96J42 360 aa14.92□□□□□ -0.02
VIM-205ENST00000485947 RADILQ96JH8 1075 aa14.92□□□□□ -0.02
VIM-205ENST00000485947 SIGLEC11Q96RL6 698 aa14.92□□□□□ -0.02
VIM-205ENST00000485947 TEAD3Q99594 435 aa14.92□□□□□ -0.02
VIM-205ENST00000485947 GSX2Q9BZM3 304 aa14.92□□□□□ -0.02
VIM-205ENST00000485947 OR51V1Q9H2C8 321 aa14.92□□□□□ -0.02
VIM-205ENST00000485947 AMBNQ9NP70 447 aa14.92□□□□□ -0.02
VIM-205ENST00000485947 RPRD1BQ9NQG5 326 aaKnown RBP14.92□□□□□ -0.02
VIM-205ENST00000485947 DLL4Q9NR61 685 aa14.92□□□□□ -0.02
VIM-205ENST00000485947 PAK1IP1Q9NWT1 392 aaPredicted RBP14.92□□□□□ -0.02
VIM-205ENST00000485947 ASB6Q9NWX5 421 aa14.92□□□□□ -0.02
VIM-205ENST00000485947 TAS2R16Q9NYV7 291 aa14.92□□□□□ -0.02
VIM-205ENST00000485947 PRSS50Q9UI38 385 aa14.92□□□□□ -0.02
VIM-205ENST00000485947 RCE1Q9Y256 329 aa14.92□□□□□ -0.02
VIM-205ENST00000485947 RNF115Q9Y4L5 304 aa14.92□□□□□ -0.02
VIM-205ENST00000485947 SNX5Q9Y5X3 404 aa14.92□□□□□ -0.02
VIM-205ENST00000485947 SLC22A23A1A5C7 686 aa14.91□□□□□ -0.02
VIM-205ENST00000485947 SLC35F4A4IF30 521 aa14.91□□□□□ -0.02
VIM-205ENST00000485947 OR6C65A6NJZ3 312 aa14.91□□□□□ -0.02
VIM-205ENST00000485947 OR5H1A6NKK0 313 aa14.91□□□□□ -0.02
VIM-205ENST00000485947 ZNF726A6NNF4 738 aa14.91□□□□□ -0.02
VIM-205ENST00000485947 GLCEO94923 617 aa14.91□□□□□ -0.02
VIM-205ENST00000485947 CD3EP07766 207 aa14.91□□□□□ -0.02
VIM-205ENST00000485947 BLVRAP53004 296 aa14.91□□□□□ -0.02
VIM-205ENST00000485947 CLDN17P56750 224 aa14.91□□□□□ -0.02
VIM-205ENST00000485947 RPS7P62081 194 aaKnown RBP14.91□□□□□ -0.02
VIM-205ENST00000485947 TGFBR3Q03167 851 aa14.91□□□□□ -0.02
VIM-205ENST00000485947 GGTLC2Q14390 218 aa14.91□□□□□ -0.02
VIM-205ENST00000485947 TMEM154Q6P9G4 183 aa14.91□□□□□ -0.02
VIM-205ENST00000485947 SVOPQ8N4V2 548 aa14.91□□□□□ -0.02
VIM-205ENST00000485947 ZNF433Q8N7K0 673 aaPredicted RBP14.91□□□□□ -0.02
VIM-205ENST00000485947 C1orf162Q8NEQ5 155 aaPredicted RBP14.91□□□□□ -0.02
VIM-205ENST00000485947 NOXO1Q8NFA2 376 aa14.91□□□□□ -0.02
VIM-205ENST00000485947 OR9Q1Q8NGQ5 310 aa14.91□□□□□ -0.02
VIM-205ENST00000485947 IGFBPL1Q8WX77 278 aa14.91□□□□□ -0.02
VIM-205ENST00000485947 RNFT2Q96EX2 444 aa14.91□□□□□ -0.02
VIM-205ENST00000485947 MRPL13Q9BYD1 178 aaKnown RBP14.91□□□□□ -0.02
VIM-205ENST00000485947 RACGAP1Q9H0H5 632 aa14.91□□□□□ -0.02
VIM-205ENST00000485947 SYT4Q9H2B2 425 aa14.91□□□□□ -0.02
VIM-205ENST00000485947 CXorf56Q9H5V9 222 aa14.91□□□□□ -0.02
VIM-205ENST00000485947 FGF20Q9NP95 211 aaPredicted RBP14.91□□□□□ -0.02
VIM-205ENST00000485947 EXOGQ9Y2C4 368 aaKnown RBP14.91□□□□□ -0.02
VIM-205ENST00000485947 PCDHGB1Q9Y5G3 927 aa14.91□□□□□ -0.02
VIM-205ENST00000485947 FLVCR1Q9Y5Y0 555 aa14.91□□□□□ -0.02
VIM-205ENST00000485947 H7C1C5 153 aa14.9□□□□□ -0.02
VIM-205ENST00000485947 RAB36O95755 333 aa14.9□□□□□ -0.02
VIM-205ENST00000485947 FADS2O95864 444 aaKnown RBP14.9□□□□□ -0.02
VIM-205ENST00000485947 CLPTM1O96005 669 aa14.9□□□□□ -0.02
VIM-205ENST00000485947 PGA4P0DJD7 388 aa14.9□□□□□ -0.02
VIM-205ENST00000485947 PGA3P0DJD8 388 aa14.9□□□□□ -0.02
VIM-205ENST00000485947 IGHV1-2P23083 117 aa14.9□□□□□ -0.02
VIM-205ENST00000485947 CDH15P55291 814 aa14.9□□□□□ -0.02
VIM-205ENST00000485947 CLRN1P58418 232 aa14.9□□□□□ -0.02
VIM-205ENST00000485947 LCN6P62502 163 aa14.9□□□□□ -0.02
VIM-205ENST00000485947 ST3GAL4Q11206 333 aa14.9□□□□□ -0.02
VIM-205ENST00000485947 PPA1Q15181 289 aa14.9□□□□□ -0.02
VIM-205ENST00000485947 ABHD12BQ7Z5M8 362 aaPredicted RBP14.9□□□□□ -0.02
VIM-205ENST00000485947 ZBTB46Q86UZ6 589 aa14.9□□□□□ -0.02
VIM-205ENST00000485947 UBE2J2Q8N2K1 259 aa14.9□□□□□ -0.02
VIM-205ENST00000485947 C17orf78Q8N4C9 275 aa14.9□□□□□ -0.02
VIM-205ENST00000485947 POMGNT2Q8NAT1 580 aa14.9□□□□□ -0.02
VIM-205ENST00000485947 TMEM171Q8WVE6 324 aa14.9□□□□□ -0.02
VIM-205ENST00000485947 LGALS12Q96DT0 336 aa14.9□□□□□ -0.02
VIM-205ENST00000485947 TMEM80Q96HE8 168 aa14.9□□□□□ -0.02
VIM-205ENST00000485947 BOD1Q96IK1 185 aa14.9□□□□□ -0.02
VIM-205ENST00000485947 RBP7Q96R05 134 aa14.9□□□□□ -0.02
VIM-205ENST00000485947 RHNO1Q9BSD3 238 aa14.9□□□□□ -0.02
VIM-205ENST00000485947 VCX3AQ9NNX9 186 aa14.9□□□□□ -0.02
VIM-205ENST00000485947 ERVK-18Q9QC07 812 aa14.9□□□□□ -0.02
VIM-205ENST00000485947 DIMT1Q9UNQ2 313 aaKnown RBP14.9□□□□□ -0.02
VIM-205ENST00000485947 FAM171A2A8MVW0 826 aa14.89□□□□□ -0.03
VIM-205ENST00000485947 LYZL6O75951 148 aa14.89□□□□□ -0.03
VIM-205ENST00000485947 HTR1AP08908 422 aa14.89□□□□□ -0.03
VIM-205ENST00000485947 CLUP10909 449 aa14.89□□□□□ -0.03
VIM-205ENST00000485947 DCKP27707 260 aa14.89□□□□□ -0.03
VIM-205ENST00000485947 GSTT1P30711 240 aa14.89□□□□□ -0.03
VIM-205ENST00000485947 MVKQ03426 396 aa14.89□□□□□ -0.03
VIM-205ENST00000485947 RUNX1T1Q06455 604 aa14.89□□□□□ -0.03
VIM-205ENST00000485947 BLMHQ13867 455 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms