RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 SMIM30A4D0T7 59 aa23.31■■□□□ 1.32
SHOX2-204ENST00000483851 ACOT7O00154 380 aa23.31■■□□□ 1.32
SHOX2-204ENST00000483851 DVL2O14641 736 aa23.31■■□□□ 1.32
SHOX2-204ENST00000483851 PSKH1P11801 424 aa23.31■■□□□ 1.32
SHOX2-204ENST00000483851 MAGEA5P43359 124 aa23.31■■□□□ 1.32
SHOX2-204ENST00000483851 STARP49675 285 aa23.31■■□□□ 1.32
SHOX2-204ENST00000483851 MEP1BQ16820 701 aa23.31■■□□□ 1.32
SHOX2-204ENST00000483851 ABLIM2Q6H8Q1 611 aa23.31■■□□□ 1.32
SHOX2-204ENST00000483851 GDPD1Q8N9F7 314 aa23.31■■□□□ 1.32
SHOX2-204ENST00000483851 NSMAFQ92636 917 aa23.31■■□□□ 1.32
SHOX2-204ENST00000483851 FOXN4Q96NZ1 517 aa23.31■■□□□ 1.32
SHOX2-204ENST00000483851 OR2M2Q96R28 347 aa23.31■■□□□ 1.32
SHOX2-204ENST00000483851 SLCO1C1Q9NYB5 712 aa23.31■■□□□ 1.32
SHOX2-204ENST00000483851 GLTPQ9NZD2 209 aa23.31■■□□□ 1.32
SHOX2-204ENST00000483851 PSMD9O00233 223 aa23.3■■□□□ 1.32
SHOX2-204ENST00000483851 CXCL13O43927 109 aa23.3■■□□□ 1.32
SHOX2-204ENST00000483851 SSX4O60224 188 aa23.3■■□□□ 1.32
SHOX2-204ENST00000483851 CEACAM4O75871 244 aa23.3■■□□□ 1.32
SHOX2-204ENST00000483851 ARL6IP5O75915 188 aa23.3■■□□□ 1.32
SHOX2-204ENST00000483851 SDHBP21912 280 aa23.3■■□□□ 1.32
SHOX2-204ENST00000483851 RPS27P42677 84 aaKnown RBP23.3■■□□□ 1.32
SHOX2-204ENST00000483851 LHX2P50458 406 aa23.3■■□□□ 1.32
SHOX2-204ENST00000483851 CLDN15P56746 228 aa23.3■■□□□ 1.32
SHOX2-204ENST00000483851 PPP3R1P63098 170 aa23.3■■□□□ 1.32
SHOX2-204ENST00000483851 RASGEF1BQ0VAM2 473 aa23.3■■□□□ 1.32
SHOX2-204ENST00000483851 C10orf128Q5T292 105 aa23.3■■□□□ 1.32
SHOX2-204ENST00000483851 ZNF544Q6NX49 715 aa23.3■■□□□ 1.32
SHOX2-204ENST00000483851 UNQ9370/PRO34162Q6UXP9 181 aa23.3■■□□□ 1.32
SHOX2-204ENST00000483851 FAM109AQ8N4B1 249 aa23.3■■□□□ 1.32
SHOX2-204ENST00000483851 FDCSPQ8NFU4 85 aa23.3■■□□□ 1.32
SHOX2-204ENST00000483851 RNF128Q8TEB7 428 aa23.3■■□□□ 1.32
SHOX2-204ENST00000483851 DIRAS2Q96HU8 199 aa23.3■■□□□ 1.32
SHOX2-204ENST00000483851 AMELYQ99218 206 aa23.3■■□□□ 1.32
SHOX2-204ENST00000483851 IGHV3-15A0A0B4J1V0 119 aa23.3■■□□□ 1.32
SHOX2-204ENST00000483851 FABP12A6NFH5 140 aa23.3■■□□□ 1.32
SHOX2-204ENST00000483851 H0YC42 278 aa23.3■■□□□ 1.32
SHOX2-204ENST00000483851 ZNF432O94892 652 aa23.3■■□□□ 1.32
SHOX2-204ENST00000483851 MPZL1O95297 269 aa23.3■■□□□ 1.32
SHOX2-204ENST00000483851 APOA1P02647 267 aa23.3■■□□□ 1.32
SHOX2-204ENST00000483851 MYL9P24844 172 aa23.3■■□□□ 1.32
SHOX2-204ENST00000483851 EIF1AXP47813 144 aaKnown RBP23.3■■□□□ 1.32
SHOX2-204ENST00000483851 CSNK1A1P48729 337 aa23.3■■□□□ 1.32
SHOX2-204ENST00000483851 CCR9P51686 369 aa23.3■■□□□ 1.32
SHOX2-204ENST00000483851 NANOS3P60323 173 aaKnown RBP23.3■■□□□ 1.32
SHOX2-204ENST00000483851 RPS11P62280 158 aaKnown RBP eCLIP23.3■■□□□ 1.32
SHOX2-204ENST00000483851 PPIAP62937 165 aaKnown RBP23.3■■□□□ 1.32
SHOX2-204ENST00000483851 FAM131AQ6UXB0 335 aa23.3■■□□□ 1.32
SHOX2-204ENST00000483851 KRT77Q7Z794 578 aa23.3■■□□□ 1.32
SHOX2-204ENST00000483851 UBQLNLQ8IYU4 475 aa23.3■■□□□ 1.32
SHOX2-204ENST00000483851 TMEM123Q8N131 208 aa23.3■■□□□ 1.32
SHOX2-204ENST00000483851 ZIC4Q8N9L1 334 aa23.3■■□□□ 1.32
SHOX2-204ENST00000483851 C11orf40Q8WZ69 217 aa23.3■■□□□ 1.32
SHOX2-204ENST00000483851 ELOVL3Q9HB03 270 aa23.3■■□□□ 1.32
SHOX2-204ENST00000483851 TRAV1-2A0A0B4J238 106 aa23.29■■□□□ 1.32
SHOX2-204ENST00000483851 FAM166BA8MTA8 275 aa23.29■■□□□ 1.32
SHOX2-204ENST00000483851 ACTL6AO96019 429 aa23.29■■□□□ 1.32
SHOX2-204ENST00000483851 QDPRP09417 244 aa23.29■■□□□ 1.32
SHOX2-204ENST00000483851 RFX2P48378 723 aa23.29■■□□□ 1.32
SHOX2-204ENST00000483851 RHOUQ7L0Q8 258 aa23.29■■□□□ 1.32
SHOX2-204ENST00000483851 MEIOBQ8N635 442 aa23.29■■□□□ 1.32
SHOX2-204ENST00000483851 OR2G2Q8NGZ5 317 aa23.29■■□□□ 1.32
SHOX2-204ENST00000483851 ST7LQ8TDW4 575 aa23.29■■□□□ 1.32
SHOX2-204ENST00000483851 MAP6Q96JE9 813 aa23.29■■□□□ 1.32
SHOX2-204ENST00000483851 DCBLD2Q96PD2 775 aa23.29■■□□□ 1.32
SHOX2-204ENST00000483851 ZNF385AQ96PM9 386 aaKnown RBP23.29■■□□□ 1.32
SHOX2-204ENST00000483851 ING1Q9UK53 422 aaPredicted RBP23.29■■□□□ 1.32
SHOX2-204ENST00000483851 TMEM212A6NML5 194 aa23.28■■□□□ 1.32
SHOX2-204ENST00000483851 ZNF716A6NP11 495 aa23.28■■□□□ 1.32
SHOX2-204ENST00000483851 RPP14O95059 124 aaKnown RBP23.28■■□□□ 1.32
SHOX2-204ENST00000483851 ZFPL1O95159 310 aa23.28■■□□□ 1.32
SHOX2-204ENST00000483851 ZNF708P17019 499 aa23.28■■□□□ 1.32
SHOX2-204ENST00000483851 RFC3P40938 356 aa23.28■■□□□ 1.32
SHOX2-204ENST00000483851 RIDAP52758 137 aaKnown RBP23.28■■□□□ 1.32
SHOX2-204ENST00000483851 SLC10A1Q14973 349 aa23.28■■□□□ 1.32
SHOX2-204ENST00000483851 LRFN4Q6PJG9 635 aa23.28■■□□□ 1.32
SHOX2-204ENST00000483851 IL17RDQ8NFM7 739 aa23.28■■□□□ 1.32
SHOX2-204ENST00000483851 THRSPQ92748 146 aa23.28■■□□□ 1.32
SHOX2-204ENST00000483851 FRRS1LQ9P0K9 344 aa23.28■■□□□ 1.32
SHOX2-204ENST00000483851 CYB5R1Q9UHQ9 305 aa23.28■■□□□ 1.32
SHOX2-204ENST00000483851 FLVCR1Q9Y5Y0 555 aa23.28■■□□□ 1.32
SHOX2-204ENST00000483851 A0A1W2PQ09 198 aa23.28■■□□□ 1.32
SHOX2-204ENST00000483851 CYTIPO60759 359 aa23.28■■□□□ 1.32
SHOX2-204ENST00000483851 CSF3P09919 207 aa23.28■■□□□ 1.32
SHOX2-204ENST00000483851 UCHL1P09936 223 aa23.28■■□□□ 1.32
SHOX2-204ENST00000483851 AZGP1P25311 298 aaKnown RBP23.28■■□□□ 1.32
SHOX2-204ENST00000483851 CLDN18P56856 261 aa23.28■■□□□ 1.32
SHOX2-204ENST00000483851 CARD17Q5XLA6 110 aa23.28■■□□□ 1.32
SHOX2-204ENST00000483851 ZSCAN2Q7Z7L9 614 aaPredicted RBP23.28■■□□□ 1.32
SHOX2-204ENST00000483851 OR6N1Q8NGY5 312 aa23.28■■□□□ 1.32
SHOX2-204ENST00000483851 OR5AK2Q8NH90 309 aa23.28■■□□□ 1.32
SHOX2-204ENST00000483851 PDCD1LG2Q9BQ51 273 aa23.28■■□□□ 1.32
SHOX2-204ENST00000483851 PPP1R3EQ9H7J1 279 aa23.28■■□□□ 1.32
SHOX2-204ENST00000483851 FOXD3Q9UJU5 478 aaPredicted RBP23.28■■□□□ 1.32
SHOX2-204ENST00000483851 NCR1O76036 304 aa23.27■■□□□ 1.32
SHOX2-204ENST00000483851 CELA3AP09093 270 aa23.27■■□□□ 1.32
SHOX2-204ENST00000483851 METAP1DQ6UB28 335 aaPredicted RBP23.27■■□□□ 1.32
SHOX2-204ENST00000483851 LRRN1Q6UXK5 716 aa23.27■■□□□ 1.32
SHOX2-204ENST00000483851 LRRC69Q6ZNQ3 347 aa23.27■■□□□ 1.32
SHOX2-204ENST00000483851 FOXL2NBQ6ZUU3 175 aa23.27■■□□□ 1.32
SHOX2-204ENST00000483851 DCXRQ7Z4W1 244 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms