RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 A0A0G2JK05 382 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 A0A1B0GTH9 108 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 TMEM212A6NML5 194 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 FAM166BA8MTA8 275 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 ARL6IP5O75915 188 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 WNT11O96014 354 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 PNPP00491 289 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 MYL9P24844 172 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 DCTDP32321 178 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 KIR3DL2P43630 455 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 EIF1AXP47813 144 aaKnown RBP12.45□□□□□ -0.42
CLK3-204ENST00000483723 CSNK1A1P48729 337 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 RIDAP52758 137 aaKnown RBP12.45□□□□□ -0.42
CLK3-204ENST00000483723 RASGEF1BQ0VAM2 473 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 SLC10A1Q14973 349 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 RHOUQ7L0Q8 258 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.45□□□□□ -0.42
CLK3-204ENST00000483723 SLC22A16Q86VW1 577 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 UBQLNLQ8IYU4 475 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 FAM109AQ8N4B1 249 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 OR10H5Q8NGA6 315 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 OR5AK2Q8NH90 309 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 ROBO4Q8WZ75 1007 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 ATF6BQ99941 703 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 SLC6A15Q9H2J7 730 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 MIXL1Q9H2W2 232 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 POLE4Q9NR33 117 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 LRP12Q9Y561 859 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 CNTRLQ7Z7A1 2325 aa12.44□□□□□ -0.42
CLK3-204ENST00000483723 A0A087WV48 116 aa12.44□□□□□ -0.42
CLK3-204ENST00000483723 CNOT1A5YKK6 2376 aaKnown RBP12.44□□□□□ -0.42
CLK3-204ENST00000483723 ZNF879B4DU55 563 aa12.44□□□□□ -0.42
CLK3-204ENST00000483723 ACTL6AO96019 429 aa12.44□□□□□ -0.42
CLK3-204ENST00000483723 NTF4P34130 210 aa12.44□□□□□ -0.42
CLK3-204ENST00000483723 LSM6P62312 80 aaKnown RBP12.44□□□□□ -0.42
CLK3-204ENST00000483723 WDR38Q5JTN6 314 aa12.44□□□□□ -0.42
CLK3-204ENST00000483723 CEP78Q5JTW2 689 aa12.44□□□□□ -0.42
CLK3-204ENST00000483723 CATSPERDQ86XM0 798 aa12.44□□□□□ -0.42
CLK3-204ENST00000483723 LINC00346Q8IVM7 164 aa12.44□□□□□ -0.42
CLK3-204ENST00000483723 PARP16Q8N5Y8 322 aa12.44□□□□□ -0.42
CLK3-204ENST00000483723 IL17RDQ8NFM7 739 aa12.44□□□□□ -0.42
CLK3-204ENST00000483723 PNPLA2Q96AD5 504 aa12.44□□□□□ -0.42
CLK3-204ENST00000483723 OR14A2Q96R54 314 aa12.44□□□□□ -0.42
CLK3-204ENST00000483723 C1orf198Q9H425 327 aa12.44□□□□□ -0.42
CLK3-204ENST00000483723 ZDHHC11Q9H8X9 412 aa12.44□□□□□ -0.42
CLK3-204ENST00000483723 CMAHPQ9Y471 501 aa12.44□□□□□ -0.42
CLK3-204ENST00000483723 KCNMB2Q9Y691 235 aa12.44□□□□□ -0.42
CLK3-204ENST00000483723 LHFPL6Q9Y693 200 aa12.44□□□□□ -0.42
CLK3-204ENST00000483723 IGKV3D-15A0A087WSY6 115 aa12.43□□□□□ -0.42
CLK3-204ENST00000483723 A0A1W2PPL8 197 aa12.43□□□□□ -0.42
CLK3-204ENST00000483723 DHHO43323 396 aa12.43□□□□□ -0.42
CLK3-204ENST00000483723 SELENOPP49908 381 aa12.43□□□□□ -0.42
CLK3-204ENST00000483723 IFITM3Q01628 133 aa12.43□□□□□ -0.42
CLK3-204ENST00000483723 DEFB109BQ30KR1 87 aa12.43□□□□□ -0.42
CLK3-204ENST00000483723 Q499Y3 187 aa12.43□□□□□ -0.42
CLK3-204ENST00000483723 RNFT1Q5M7Z0 435 aa12.43□□□□□ -0.42
CLK3-204ENST00000483723 C16orf87Q6PH81 154 aa12.43□□□□□ -0.42
CLK3-204ENST00000483723 FCRLAQ7L513 359 aa12.43□□□□□ -0.42
CLK3-204ENST00000483723 OR10S1Q8NGN2 331 aa12.43□□□□□ -0.42
CLK3-204ENST00000483723 OR6N1Q8NGY5 312 aa12.43□□□□□ -0.42
CLK3-204ENST00000483723 ACOT12Q8WYK0 555 aa12.43□□□□□ -0.42
CLK3-204ENST00000483723 ABTB1Q969K4 478 aaPredicted RBP12.43□□□□□ -0.42
CLK3-204ENST00000483723 TMEM45BQ96B21 275 aa12.43□□□□□ -0.42
CLK3-204ENST00000483723 KCTD12Q96CX2 325 aaKnown RBP12.43□□□□□ -0.42
CLK3-204ENST00000483723 ZNF845Q96IR2 970 aaPredicted RBP12.43□□□□□ -0.42
CLK3-204ENST00000483723 DERL3Q96Q80 235 aa12.43□□□□□ -0.42
CLK3-204ENST00000483723 SLC30A2Q9BRI3 323 aa12.43□□□□□ -0.42
CLK3-204ENST00000483723 SEC61A2Q9H9S3 476 aa12.43□□□□□ -0.42
CLK3-204ENST00000483723 ABCB9Q9NP78 766 aa12.43□□□□□ -0.42
CLK3-204ENST00000483723 PAQR5Q9NXK6 330 aaPredicted RBP12.43□□□□□ -0.42
CLK3-204ENST00000483723 R4GMQ9 66 aa12.43□□□□□ -0.42
CLK3-204ENST00000483723 TRBV5-7A0A0A0MS05 114 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 SMIM30A4D0T7 59 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 ANKRD61A6NGH8 418 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 GPR171O14626 319 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 NCR1O76036 304 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 CDAP32320 146 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 RSPO4Q2I0M5 234 aaPredicted RBP12.42□□□□□ -0.42
CLK3-204ENST00000483723 OR7E24Q6IFN5 339 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 ZNF544Q6NX49 715 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 CORO6Q6QEF8 472 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 MEIOBQ8N635 442 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 SLAMF6Q96DU3 332 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 SMAD5Q99717 465 aaKnown RBP12.42□□□□□ -0.42
CLK3-204ENST00000483723 COMMD4Q9H0A8 199 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 RNF122Q9H9V4 155 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 EMC7Q9NPA0 242 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 NOX4Q9NPH5 578 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 SSUH2Q9Y2M2 353 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 CSAG2Q9Y5P2 127 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 PHF3Q92576 2039 aaKnown RBP12.42□□□□□ -0.42
CLK3-204ENST00000483723 LOC110117498-PIK3R3F6TDL0 507 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 ACOT7O00154 380 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 RAF1P04049 648 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 ITGB2P05107 769 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 SRMP19623 302 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 RAB3BP20337 219 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 THBS2P35442 1172 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 MMP16P51512 607 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 HSD17B12Q53GQ0 312 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms