RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 PLPP2O43688 288 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 MRPL33O75394 65 aaKnown RBP8.9□□□□□ -0.98
HDAC6-226ENST00000483656 SULT1C4O75897 302 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 NR2C1P13056 603 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 CAPZA2P47755 286 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 TDGF1P3P51864 188 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 GBX2P52951 348 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-226ENST00000483656 NANOS3P60323 173 aaKnown RBP8.9□□□□□ -0.98
HDAC6-226ENST00000483656 SIRPAP78324 504 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 FABP5Q01469 135 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 NFATC3Q12968 1075 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 ENDOGQ14249 297 aaKnown RBP8.9□□□□□ -0.98
HDAC6-226ENST00000483656 CDK5R1Q15078 307 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 GUSBP1Q15486 140 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 SGCAQ16586 387 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 ACSF3Q4G176 576 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-226ENST00000483656 RIPPLY2Q5TAB7 128 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 LIPNQ5VXI9 398 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 CD200R1LQ6Q8B3 271 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 ARL9Q6T311 187 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 LRRN1Q6UXK5 716 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 SPATC1Q76KD6 591 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 DCXRQ7Z4W1 244 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 KCTD20Q7Z5Y7 419 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 CISD2Q8N5K1 135 aaKnown RBP8.9□□□□□ -0.98
HDAC6-226ENST00000483656 OR10H5Q8NGA6 315 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 OR52N5Q8NH56 324 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 NDNFQ8TB73 568 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 CPT1CQ8TCG5 803 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 ASB17Q8WXJ9 295 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 HSD17B8Q92506 261 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 TMEM203Q969S6 136 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 MRPL48Q96GC5 212 aaKnown RBP8.9□□□□□ -0.98
HDAC6-226ENST00000483656 PGLYRP3Q96LB9 341 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 TM9SF2Q99805 663 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 TTYH2Q9BSA4 534 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 RBM24Q9BX46 236 aaKnown RBP8.9□□□□□ -0.98
HDAC6-226ENST00000483656 PRORYQ9H606 182 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 ELOVL3Q9HB03 270 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 CRLF2Q9HC73 371 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 GP6Q9HCN6 339 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 SLC7A10Q9NS82 523 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 PTTG2Q9NZH5 202 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 TUBD1Q9UJT1 453 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 STUB1Q9UNE7 303 aa8.9□□□□□ -0.98
HDAC6-226ENST00000483656 PHF3Q92576 2039 aaKnown RBP8.9□□□□□ -0.99
HDAC6-226ENST00000483656 BOD1L1Q8NFC6 3051 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 BSNQ9UPA5 3926 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 LOC100506127A0A0U1RQW1 187 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 TRDV1A0A1B0GX56 115 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 AHRRA9YTQ3 701 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 DVL2O14641 736 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 SLC22A1O15245 554 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 NOL3O60936 208 aaKnown RBP8.89□□□□□ -0.99
HDAC6-226ENST00000483656 SS18L1O75177 396 aaPredicted RBP8.89□□□□□ -0.99
HDAC6-226ENST00000483656 SRSF10O75494 262 aaKnown RBP8.89□□□□□ -0.99
HDAC6-226ENST00000483656 PNPP00491 289 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 IGHV3-9P01782 118 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 KRT8P05787 483 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 CD1AP06126 327 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 CD53P19397 219 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 MSR1P21757 451 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 AGTR1P30556 359 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 GABRA5P31644 462 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 OPRL1P41146 370 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 TGM4P49221 684 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 FOXG1P55316 489 aaPredicted RBP8.89□□□□□ -0.99
HDAC6-226ENST00000483656 TAS2R43P59537 309 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 LSM6P62312 80 aaKnown RBP8.89□□□□□ -0.99
HDAC6-226ENST00000483656 HIST1H3AP68431 136 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 MRPS34P82930 218 aaKnown RBP8.89□□□□□ -0.99
HDAC6-226ENST00000483656 ROR2Q01974 943 aaKnown RBP8.89□□□□□ -0.99
HDAC6-226ENST00000483656 SLC3A1Q07837 685 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 INSL4Q14641 139 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 CEACAM16Q2WEN9 425 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 CCDC58Q4VC31 144 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 KRTCAP3Q53RY4 240 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 HIST2H3PS2Q5TEC6 136 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 RTL6Q6ICC9 239 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 FDX2Q6P4F2 183 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 RPL22L1Q6P5R6 122 aaKnown RBP8.89□□□□□ -0.99
HDAC6-226ENST00000483656 FAM180AQ6UWF9 173 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 TMEM91Q6ZNR0 172 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 GDPGP1Q6ZNW5 385 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 CFAP77Q6ZQR2 320 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 SEM1Q6ZVN7 128 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 HIST2H3AQ71DI3 136 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 MCEMP1Q8IX19 187 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 ZNF679Q8IYX0 411 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 ALDH16A1Q8IZ83 802 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 GPR137CQ8N3F9 429 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 YIPF7Q8N8F6 280 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 C9orf106Q8NAJ2 232 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 KDF1Q8NAX2 398 aaPredicted RBP8.89□□□□□ -0.99
HDAC6-226ENST00000483656 RNF133Q8WVZ7 376 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 WNT2BQ93097 391 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 SLAMF6Q96DU3 332 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 ALKBH3Q96Q83 286 aaPredicted RBP8.89□□□□□ -0.99
HDAC6-226ENST00000483656 TRIB1Q96RU8 372 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 DCUN1D5Q9BTE7 237 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms