RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 RFPL3SP0C7P2 107 aa11.77□□□□□ -0.53
CPNE1-225ENST00000483495 NR2C1P13056 603 aa11.77□□□□□ -0.53
CPNE1-225ENST00000483495 ADRA2CP18825 462 aa11.77□□□□□ -0.53
CPNE1-225ENST00000483495 CFPP27918 469 aa11.77□□□□□ -0.53
CPNE1-225ENST00000483495 DCTDP32321 178 aa11.77□□□□□ -0.53
CPNE1-225ENST00000483495 CD96P40200 585 aa11.77□□□□□ -0.53
CPNE1-225ENST00000483495 SOX2P48431 317 aa11.77□□□□□ -0.53
CPNE1-225ENST00000483495 ZNF133P52736 654 aaPredicted RBP11.77□□□□□ -0.53
CPNE1-225ENST00000483495 FOXO1Q12778 655 aa11.77□□□□□ -0.53
CPNE1-225ENST00000483495 MADCAM1Q13477 382 aa11.77□□□□□ -0.53
CPNE1-225ENST00000483495 TAB1Q15750 504 aa11.77□□□□□ -0.53
CPNE1-225ENST00000483495 CREB3L2Q70SY1 520 aa11.77□□□□□ -0.53
CPNE1-225ENST00000483495 SPATC1Q76KD6 591 aa11.77□□□□□ -0.53
CPNE1-225ENST00000483495 LINC00346Q8IVM7 164 aa11.77□□□□□ -0.53
CPNE1-225ENST00000483495 OR10H5Q8NGA6 315 aa11.77□□□□□ -0.53
CPNE1-225ENST00000483495 ADAMTS14Q8WXS8 1223 aa11.77□□□□□ -0.53
CPNE1-225ENST00000483495 NKD1Q969G9 470 aa11.77□□□□□ -0.53
CPNE1-225ENST00000483495 OR2B2Q9GZK3 357 aa11.77□□□□□ -0.53
CPNE1-225ENST00000483495 SLC22A4Q9H015 551 aa11.77□□□□□ -0.53
CPNE1-225ENST00000483495 ZFP64Q9NPA5 681 aa11.77□□□□□ -0.53
CPNE1-225ENST00000483495 IL17BQ9UHF5 180 aa11.77□□□□□ -0.53
CPNE1-225ENST00000483495 PCDHGA9Q9Y5G4 932 aaKnown RBP11.77□□□□□ -0.53
CPNE1-225ENST00000483495 ZNF318Q5VUA4 2279 aa11.77□□□□□ -0.53
CPNE1-225ENST00000483495 A0A0B4J203 849 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 PRR33A8MZF0 331 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 NEURL1O76050 574 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 ISG15P05161 165 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 CD82P27701 267 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 NR4A2P43354 598 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 MMP16P51512 607 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 CLDN17P56750 224 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 RAC3P60763 192 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 OC90Q02509 493 aaPredicted RBP11.76□□□□□ -0.53
CPNE1-225ENST00000483495 AIMP2Q13155 320 aaKnown RBP11.76□□□□□ -0.53
CPNE1-225ENST00000483495 MFAP5Q13361 173 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 TRIQKQ629K1 86 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 PYHIN1Q6K0P9 492 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 LRFN4Q6PJG9 635 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 RHOUQ7L0Q8 258 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 OR14L1PQ8NHC6 308 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 LGALS14Q8TCE9 139 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 SMAD5Q99717 465 aaKnown RBP11.76□□□□□ -0.53
CPNE1-225ENST00000483495 WACQ9BTA9 647 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 C11orf54Q9H0W9 315 aaPredicted RBP11.76□□□□□ -0.53
CPNE1-225ENST00000483495 G6PC2Q9NQR9 355 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 LRFN1Q9P244 771 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 FBXL3Q9UKT7 428 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 FREM3P0C091 2139 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 TRAV8-7A0A075B6U6 113 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 TTLL8A6PVC2 850 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 TNFSF11O14788 317 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 QDPRP09417 244 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 UBE2NLQ5JXB2 153 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 C10orf128Q5T292 105 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 STPG1Q5TH74 334 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 ABHD17BQ5VST6 288 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 CARD17Q5XLA6 110 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 BAIAP2L2Q6UXY1 529 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 YRDCQ86U90 279 aaKnown RBP11.76□□□□□ -0.53
CPNE1-225ENST00000483495 GGNQ86UU5 652 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 ZNF433Q8N7K0 673 aaPredicted RBP11.76□□□□□ -0.53
CPNE1-225ENST00000483495 C19orf18Q8NEA5 215 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 OR9K2Q8NGE7 335 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 OR10S1Q8NGN2 331 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 ZNF671Q8TAW3 534 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 CHAC2Q8WUX2 184 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 TMEM54Q969K7 222 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 SLAMF6Q96DU3 332 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 ADGRG7Q96K78 797 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 NEDD4LQ96PU5 975 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 UCN2Q96RP3 112 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 SF3B5Q9BWJ5 86 aaKnown RBP11.76□□□□□ -0.53
CPNE1-225ENST00000483495 SRXN1Q9BYN0 137 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 C1orf198Q9H425 327 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 GLTPQ9NZD2 209 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 RABL2AQ9UBK7 228 aaPredicted RBP11.76□□□□□ -0.53
CPNE1-225ENST00000483495 BOKQ9UMX3 212 aaPredicted RBP11.76□□□□□ -0.53
CPNE1-225ENST00000483495 RABL2BQ9UNT1 228 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 LHFPL6Q9Y693 200 aa11.76□□□□□ -0.53
CPNE1-225ENST00000483495 A0A1W2PPL8 197 aa11.75□□□□□ -0.53
CPNE1-225ENST00000483495 PINLYPA6NC86 204 aa11.75□□□□□ -0.53
CPNE1-225ENST00000483495 PCNX2A6NKB5 2137 aa11.75□□□□□ -0.53
CPNE1-225ENST00000483495 CDK2AP1O14519 115 aa11.75□□□□□ -0.53
CPNE1-225ENST00000483495 UBL3O95164 117 aa11.75□□□□□ -0.53
CPNE1-225ENST00000483495 H2BFMP0C1H6 154 aa11.75□□□□□ -0.53
CPNE1-225ENST00000483495 CALCBP10092 127 aa11.75□□□□□ -0.53
CPNE1-225ENST00000483495 CASRP41180 1078 aa11.75□□□□□ -0.53
CPNE1-225ENST00000483495 SUCLG1P53597 346 aaKnown RBP11.75□□□□□ -0.53
CPNE1-225ENST00000483495 SCAND1P57086 179 aa11.75□□□□□ -0.53
CPNE1-225ENST00000483495 TOMM20Q15388 145 aa11.75□□□□□ -0.53
CPNE1-225ENST00000483495 ODF4Q2M2E3 257 aa11.75□□□□□ -0.53
CPNE1-225ENST00000483495 HES5Q5TA89 166 aa11.75□□□□□ -0.53
CPNE1-225ENST00000483495 SPINK14Q6IE38 97 aa11.75□□□□□ -0.53
CPNE1-225ENST00000483495 CORO6Q6QEF8 472 aa11.75□□□□□ -0.53
CPNE1-225ENST00000483495 DTX1Q86Y01 620 aa11.75□□□□□ -0.53
CPNE1-225ENST00000483495 TMEM123Q8N131 208 aa11.75□□□□□ -0.53
CPNE1-225ENST00000483495 CELF2-AS1Q8N7Q2 184 aa11.75□□□□□ -0.53
CPNE1-225ENST00000483495 TSEN15Q8WW01 171 aaKnown RBP11.75□□□□□ -0.53
CPNE1-225ENST00000483495 ASB5Q8WWX0 329 aa11.75□□□□□ -0.53
CPNE1-225ENST00000483495 TRIM63Q969Q1 353 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms