RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 COMTD1Q86VU5 262 aa12.43□□□□□ -0.42
HDAC6-224ENST00000481929 LDLRAD3Q86YD5 345 aa12.43□□□□□ -0.42
HDAC6-224ENST00000481929 ALDH16A1Q8IZ83 802 aa12.43□□□□□ -0.42
HDAC6-224ENST00000481929 UBLCP1Q8WVY7 318 aaPredicted RBP12.43□□□□□ -0.42
HDAC6-224ENST00000481929 SGCDQ92629 289 aa12.43□□□□□ -0.42
HDAC6-224ENST00000481929 MAL2Q969L2 176 aa12.43□□□□□ -0.42
HDAC6-224ENST00000481929 TMEM246Q9BRR3 403 aa12.43□□□□□ -0.42
HDAC6-224ENST00000481929 CDADC1Q9BWV3 514 aa12.43□□□□□ -0.42
HDAC6-224ENST00000481929 GCM1Q9NP62 436 aa12.43□□□□□ -0.42
HDAC6-224ENST00000481929 AIG1Q9NVV5 245 aa12.43□□□□□ -0.42
HDAC6-224ENST00000481929 AURKAIP1Q9NWT8 199 aaPredicted RBP12.43□□□□□ -0.42
HDAC6-224ENST00000481929 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.43□□□□□ -0.42
HDAC6-224ENST00000481929 CENPVL3A0A0U1RRI6 287 aa12.42□□□□□ -0.42
HDAC6-224ENST00000481929 MCIDASD6RGH6 385 aa12.42□□□□□ -0.42
HDAC6-224ENST00000481929 PHYHO14832 338 aa12.42□□□□□ -0.42
HDAC6-224ENST00000481929 SFTPBP07988 381 aa12.42□□□□□ -0.42
HDAC6-224ENST00000481929 ALDOCP09972 364 aaKnown RBP12.42□□□□□ -0.42
HDAC6-224ENST00000481929 NUDT7P0C024 238 aa12.42□□□□□ -0.42
HDAC6-224ENST00000481929 CDAP32320 146 aa12.42□□□□□ -0.42
HDAC6-224ENST00000481929 CFHR2P36980 270 aa12.42□□□□□ -0.42
HDAC6-224ENST00000481929 IER3P46695 156 aa12.42□□□□□ -0.42
HDAC6-224ENST00000481929 CDH12P55289 794 aa12.42□□□□□ -0.42
HDAC6-224ENST00000481929 ERVK-25P63136 954 aa12.42□□□□□ -0.42
HDAC6-224ENST00000481929 PSG4Q00888 419 aa12.42□□□□□ -0.42
HDAC6-224ENST00000481929 GTDC1Q4AE62 458 aa12.42□□□□□ -0.42
HDAC6-224ENST00000481929 OGFOD2Q6N063 350 aa12.42□□□□□ -0.42
HDAC6-224ENST00000481929 NPEPL1Q8NDH3 523 aa12.42□□□□□ -0.42
HDAC6-224ENST00000481929 VPS33AQ96AX1 596 aa12.42□□□□□ -0.42
HDAC6-224ENST00000481929 C4orf45Q96LM5 186 aa12.42□□□□□ -0.42
HDAC6-224ENST00000481929 DPAGT1Q9H3H5 408 aa12.42□□□□□ -0.42
HDAC6-224ENST00000481929 GRPEL1Q9HAV7 217 aa12.42□□□□□ -0.42
HDAC6-224ENST00000481929 ZNF816-ZNF321PA0A0X1KG74 233 aa12.41□□□□□ -0.42
HDAC6-224ENST00000481929 TOX4O94842 621 aa12.41□□□□□ -0.42
HDAC6-224ENST00000481929 CH25HO95992 272 aa12.41□□□□□ -0.42
HDAC6-224ENST00000481929 CYB5R3P00387 301 aaPredicted RBP12.41□□□□□ -0.42
HDAC6-224ENST00000481929 KITLGP21583 273 aa12.41□□□□□ -0.42
HDAC6-224ENST00000481929 HERPUD1Q15011 391 aa12.41□□□□□ -0.42
HDAC6-224ENST00000481929 SGCAQ16586 387 aa12.41□□□□□ -0.42
HDAC6-224ENST00000481929 ZNF74Q16587 644 aa12.41□□□□□ -0.42
HDAC6-224ENST00000481929 ZNF404Q494X3 552 aa12.41□□□□□ -0.42
HDAC6-224ENST00000481929 C10orf128Q5T292 105 aa12.41□□□□□ -0.42
HDAC6-224ENST00000481929 WDR25Q64LD2 544 aaPredicted RBP12.41□□□□□ -0.42
HDAC6-224ENST00000481929 RANBP3LQ86VV4 465 aaPredicted RBP12.41□□□□□ -0.42
HDAC6-224ENST00000481929 NUDCD3Q8IVD9 361 aa12.41□□□□□ -0.42
HDAC6-224ENST00000481929 ZNF420Q8TAQ5 688 aaPredicted RBP12.41□□□□□ -0.42
HDAC6-224ENST00000481929 NABP1Q96AH0 204 aa12.41□□□□□ -0.42
HDAC6-224ENST00000481929 ZNF607Q96SK3 696 aa12.41□□□□□ -0.42
HDAC6-224ENST00000481929 SPATA5L1Q9BVQ7 753 aa12.41□□□□□ -0.42
HDAC6-224ENST00000481929 MRPL13Q9BYD1 178 aaKnown RBP12.41□□□□□ -0.42
HDAC6-224ENST00000481929 OR2H1Q9GZK4 316 aa12.41□□□□□ -0.42
HDAC6-224ENST00000481929 WNT5BQ9H1J7 359 aa12.41□□□□□ -0.42
HDAC6-224ENST00000481929 NANSQ9NR45 359 aa12.41□□□□□ -0.42
HDAC6-224ENST00000481929 SLC13A4Q9UKG4 626 aa12.41□□□□□ -0.42
HDAC6-224ENST00000481929 RAP2CQ9Y3L5 183 aa12.41□□□□□ -0.42
HDAC6-224ENST00000481929 IGHV1-69DA0A0B4J2H0 117 aa12.4□□□□□ -0.42
HDAC6-224ENST00000481929 TLDC2A0PJX2 215 aa12.4□□□□□ -0.42
HDAC6-224ENST00000481929 CENPBD1B2RD01 187 aa12.4□□□□□ -0.42
HDAC6-224ENST00000481929 ZNF879B4DU55 563 aa12.4□□□□□ -0.42
HDAC6-224ENST00000481929 C22orf46C9J442 243 aa12.4□□□□□ -0.42
HDAC6-224ENST00000481929 GPR37O15354 613 aa12.4□□□□□ -0.42
HDAC6-224ENST00000481929 TPST1O60507 370 aa12.4□□□□□ -0.42
HDAC6-224ENST00000481929 TSPAN9O75954 239 aa12.4□□□□□ -0.42
HDAC6-224ENST00000481929 SLC2A10O95528 541 aa12.4□□□□□ -0.42
HDAC6-224ENST00000481929 ABHD16AO95870 558 aa12.4□□□□□ -0.42
HDAC6-224ENST00000481929 IGHV1-69P01742 117 aa12.4□□□□□ -0.42
HDAC6-224ENST00000481929 HIST1H2ABP04908 130 aa12.4□□□□□ -0.42
HDAC6-224ENST00000481929 IL6P05231 212 aa12.4□□□□□ -0.42
HDAC6-224ENST00000481929 RPL14P50914 215 aaKnown RBP12.4□□□□□ -0.42
HDAC6-224ENST00000481929 ZNF133P52736 654 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-224ENST00000481929 RGNQ15493 299 aa12.4□□□□□ -0.42
HDAC6-224ENST00000481929 RUNDC3AQ59EK9 446 aa12.4□□□□□ -0.42
HDAC6-224ENST00000481929 OXLD1Q5BKU9 147 aa12.4□□□□□ -0.42
HDAC6-224ENST00000481929 C11orf87Q6NUJ2 197 aa12.4□□□□□ -0.42
HDAC6-224ENST00000481929 HIST3H2AQ7L7L0 130 aa12.4□□□□□ -0.42
HDAC6-224ENST00000481929 HDDC2Q7Z4H3 204 aa12.4□□□□□ -0.42
HDAC6-224ENST00000481929 KRT73Q86Y46 540 aa12.4□□□□□ -0.42
HDAC6-224ENST00000481929 SCCPDHQ8NBX0 429 aa12.4□□□□□ -0.42
HDAC6-224ENST00000481929 C10orf82Q8WW14 230 aa12.4□□□□□ -0.42
HDAC6-224ENST00000481929 HIST1H2ACQ93077 130 aa12.4□□□□□ -0.42
HDAC6-224ENST00000481929 TBX15Q96SF7 602 aa12.4□□□□□ -0.42
HDAC6-224ENST00000481929 SEPHS2Q99611 448 aa12.4□□□□□ -0.42
HDAC6-224ENST00000481929 RAD21L1Q9H4I0 556 aa12.4□□□□□ -0.42
HDAC6-224ENST00000481929 RMND5AQ9H871 391 aa12.4□□□□□ -0.42
HDAC6-224ENST00000481929 MEAF6Q9HAF1 191 aa12.4□□□□□ -0.42
HDAC6-224ENST00000481929 SLCO1B3Q9NPD5 702 aa12.4□□□□□ -0.42
HDAC6-224ENST00000481929 ZNF229Q9UJW7 825 aa12.4□□□□□ -0.42
HDAC6-224ENST00000481929 UGT2A1Q9Y4X1 527 aa12.4□□□□□ -0.42
HDAC6-224ENST00000481929 A0A0U1RQK1 487 aa12.39□□□□□ -0.43
HDAC6-224ENST00000481929 A0A1W2PRG6 482 aa12.39□□□□□ -0.43
HDAC6-224ENST00000481929 BTBD17A6NE02 478 aa12.39□□□□□ -0.43
HDAC6-224ENST00000481929 LRRC30A6NM36 301 aa12.39□□□□□ -0.43
HDAC6-224ENST00000481929 XPNPEP2O43895 674 aa12.39□□□□□ -0.43
HDAC6-224ENST00000481929 FSTL3O95633 263 aa12.39□□□□□ -0.43
HDAC6-224ENST00000481929 SERPINE1P05121 402 aa12.39□□□□□ -0.43
HDAC6-224ENST00000481929 UMPSP11172 480 aa12.39□□□□□ -0.43
HDAC6-224ENST00000481929 MMP9P14780 707 aa12.39□□□□□ -0.43
HDAC6-224ENST00000481929 TUBG1P23258 451 aa12.39□□□□□ -0.43
HDAC6-224ENST00000481929 ABCE1P61221 599 aaKnown RBP12.39□□□□□ -0.43
HDAC6-224ENST00000481929 DBPQ10586 325 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-224ENST00000481929 FADDQ13158 208 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms