RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 CRMP1Q14194 572 aa9.15□□□□□ -0.94
SSBP1-210ENST00000481508 C3orf36Q3SXR2 165 aa9.15□□□□□ -0.94
SSBP1-210ENST00000481508 NRN1LQ496H8 165 aa9.15□□□□□ -0.94
SSBP1-210ENST00000481508 C1QTNF12Q5T7M4 302 aa9.15□□□□□ -0.94
SSBP1-210ENST00000481508 FAM27BQ5VT28 67 aa9.15□□□□□ -0.94
SSBP1-210ENST00000481508 TMEM236Q5W0B7 351 aa9.15□□□□□ -0.94
SSBP1-210ENST00000481508 ACSM5Q6NUN0 579 aa9.15□□□□□ -0.94
SSBP1-210ENST00000481508 RPL13AP3Q6NVV1 102 aa9.15□□□□□ -0.94
SSBP1-210ENST00000481508 YTHDF3Q7Z739 585 aaKnown RBP9.15□□□□□ -0.94
SSBP1-210ENST00000481508 JAZF1Q86VZ6 243 aa9.15□□□□□ -0.94
SSBP1-210ENST00000481508 KRTAP1-3Q8IUG1 177 aa9.15□□□□□ -0.94
SSBP1-210ENST00000481508 LNX2Q8N448 690 aa9.15□□□□□ -0.94
SSBP1-210ENST00000481508 CPEB3Q8NE35 698 aaKnown RBP9.15□□□□□ -0.94
SSBP1-210ENST00000481508 OR9Q1Q8NGQ5 310 aa9.15□□□□□ -0.94
SSBP1-210ENST00000481508 AKR7LQ8NHP1 331 aa9.15□□□□□ -0.94
SSBP1-210ENST00000481508 FNDC8Q8TC99 324 aa9.15□□□□□ -0.94
SSBP1-210ENST00000481508 C11orf40Q8WZ69 217 aa9.15□□□□□ -0.94
SSBP1-210ENST00000481508 NINJ1Q92982 152 aa9.15□□□□□ -0.94
SSBP1-210ENST00000481508 FBXW5Q969U6 566 aa9.15□□□□□ -0.94
SSBP1-210ENST00000481508 CCL19Q99731 98 aa9.15□□□□□ -0.94
SSBP1-210ENST00000481508 HCAR1Q9BXC0 346 aa9.15□□□□□ -0.94
SSBP1-210ENST00000481508 GABARAPL1Q9H0R8 117 aa9.15□□□□□ -0.94
SSBP1-210ENST00000481508 RNF121Q9H920 327 aa9.15□□□□□ -0.94
SSBP1-210ENST00000481508 SRA1Q9HD15 236 aaKnown RBP9.15□□□□□ -0.94
SSBP1-210ENST00000481508 DLL4Q9NR61 685 aa9.15□□□□□ -0.94
SSBP1-210ENST00000481508 B9D1Q9UPM9 204 aa9.15□□□□□ -0.94
SSBP1-210ENST00000481508 SAC3D1A6NKF1 404 aa9.14□□□□□ -0.95
SSBP1-210ENST00000481508 IDH3BO43837 385 aa9.14□□□□□ -0.95
SSBP1-210ENST00000481508 AHCYL1O43865 530 aa9.14□□□□□ -0.95
SSBP1-210ENST00000481508 FARS2O95363 451 aaKnown RBP9.14□□□□□ -0.95
SSBP1-210ENST00000481508 RAB36O95755 333 aa9.14□□□□□ -0.95
SSBP1-210ENST00000481508 RENP00797 406 aa9.14□□□□□ -0.95
SSBP1-210ENST00000481508 TFP02787 698 aa9.14□□□□□ -0.95
SSBP1-210ENST00000481508 GYPBP06028 91 aa9.14□□□□□ -0.95
SSBP1-210ENST00000481508 CST2P09228 141 aa9.14□□□□□ -0.95
SSBP1-210ENST00000481508 OSMP13725 252 aa9.14□□□□□ -0.95
SSBP1-210ENST00000481508 ZNF23P17027 643 aa9.14□□□□□ -0.95
SSBP1-210ENST00000481508 DNASE1P24855 282 aa9.14□□□□□ -0.95
SSBP1-210ENST00000481508 APEX1P27695 318 aaKnown RBP9.14□□□□□ -0.95
SSBP1-210ENST00000481508 POU1F1P28069 291 aa9.14□□□□□ -0.95
SSBP1-210ENST00000481508 NKX6-1P78426 367 aaPredicted RBP9.14□□□□□ -0.95
SSBP1-210ENST00000481508 PSG4Q00888 419 aa9.14□□□□□ -0.95
SSBP1-210ENST00000481508 MST1LQ2TV78 715 aa9.14□□□□□ -0.95
SSBP1-210ENST00000481508 DEFB113Q30KQ7 82 aa9.14□□□□□ -0.95
SSBP1-210ENST00000481508 PABPC1L2AQ5JQF8 200 aa9.14□□□□□ -0.95
SSBP1-210ENST00000481508 C11orf71Q6IPW1 123 aa9.14□□□□□ -0.95
SSBP1-210ENST00000481508 ZNF774Q6NX45 483 aa9.14□□□□□ -0.95
SSBP1-210ENST00000481508 VHLLQ6RSH7 139 aa9.14□□□□□ -0.95
SSBP1-210ENST00000481508 C20orf204Q6ZNR8 217 aa9.14□□□□□ -0.95
SSBP1-210ENST00000481508 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.14□□□□□ -0.95
SSBP1-210ENST00000481508 ZBTB46Q86UZ6 589 aa9.14□□□□□ -0.95
SSBP1-210ENST00000481508 CCDC36Q8IYA8 594 aa9.14□□□□□ -0.95
SSBP1-210ENST00000481508 ATG16L2Q8NAA4 619 aa9.14□□□□□ -0.95
SSBP1-210ENST00000481508 OR51L1Q8NGJ5 315 aa9.14□□□□□ -0.95
SSBP1-210ENST00000481508 SMAP2Q8WU79 429 aaPredicted RBP9.14□□□□□ -0.95
SSBP1-210ENST00000481508 MBD6Q96DN6 1003 aa9.14□□□□□ -0.95
SSBP1-210ENST00000481508 NRBF2Q96F24 287 aa9.14□□□□□ -0.95
SSBP1-210ENST00000481508 SNX18Q96RF0 628 aa9.14□□□□□ -0.95
SSBP1-210ENST00000481508 OR2H1Q9GZK4 316 aa9.14□□□□□ -0.95
SSBP1-210ENST00000481508 MED20Q9H944 212 aa9.14□□□□□ -0.95
SSBP1-210ENST00000481508 TMEFF2Q9UIK5 374 aaPredicted RBP9.14□□□□□ -0.95
SSBP1-210ENST00000481508 POU2F3Q9UKI9 436 aa9.14□□□□□ -0.95
SSBP1-210ENST00000481508 OAZ3Q9UMX2 235 aa9.14□□□□□ -0.95
SSBP1-210ENST00000481508 LAMP3Q9UQV4 416 aa9.14□□□□□ -0.95
SSBP1-210ENST00000481508 LOC100509620A0A075B734 347 aa9.13□□□□□ -0.95
SSBP1-210ENST00000481508 TVP23AA6NH52 213 aa9.13□□□□□ -0.95
SSBP1-210ENST00000481508 FAM183AA6NL82 134 aa9.13□□□□□ -0.95
SSBP1-210ENST00000481508 H3BN98 237 aa9.13□□□□□ -0.95
SSBP1-210ENST00000481508 M0R129 80 aa9.13□□□□□ -0.95
SSBP1-210ENST00000481508 GPRIN2O60269 458 aa9.13□□□□□ -0.95
SSBP1-210ENST00000481508 CRYAAP02489 173 aa9.13□□□□□ -0.95
SSBP1-210ENST00000481508 SERPINA5P05154 406 aa9.13□□□□□ -0.95
SSBP1-210ENST00000481508 NR2C1P13056 603 aa9.13□□□□□ -0.95
SSBP1-210ENST00000481508 ANXA8P13928 327 aa9.13□□□□□ -0.95
SSBP1-210ENST00000481508 EPHA2P29317 976 aa9.13□□□□□ -0.95
SSBP1-210ENST00000481508 GRK5P34947 590 aa9.13□□□□□ -0.95
SSBP1-210ENST00000481508 THBS4P35443 961 aa9.13□□□□□ -0.95
SSBP1-210ENST00000481508 CDKN1AP38936 164 aa9.13□□□□□ -0.95
SSBP1-210ENST00000481508 CENPAP49450 140 aa9.13□□□□□ -0.95
SSBP1-210ENST00000481508 FABP6P51161 128 aa9.13□□□□□ -0.95
SSBP1-210ENST00000481508 ERVS71-1P61550 626 aa9.13□□□□□ -0.95
SSBP1-210ENST00000481508 CDK5Q00535 292 aa9.13□□□□□ -0.95
SSBP1-210ENST00000481508 GABPB1Q06547 395 aaPredicted RBP9.13□□□□□ -0.95
SSBP1-210ENST00000481508 COX10Q12887 443 aa9.13□□□□□ -0.95
SSBP1-210ENST00000481508 GINS1Q14691 196 aa9.13□□□□□ -0.95
SSBP1-210ENST00000481508 SLC36A2Q495M3 483 aa9.13□□□□□ -0.95
SSBP1-210ENST00000481508 LCE2CQ5TA81 110 aa9.13□□□□□ -0.95
SSBP1-210ENST00000481508 KRT80Q6KB66 452 aa9.13□□□□□ -0.95
SSBP1-210ENST00000481508 TMEM53Q6P2H8 277 aa9.13□□□□□ -0.95
SSBP1-210ENST00000481508 CORO6Q6QEF8 472 aa9.13□□□□□ -0.95
SSBP1-210ENST00000481508 DTX2Q86UW9 622 aa9.13□□□□□ -0.95
SSBP1-210ENST00000481508 LINC00346Q8IVM7 164 aa9.13□□□□□ -0.95
SSBP1-210ENST00000481508 GLB1L2Q8IW92 636 aa9.13□□□□□ -0.95
SSBP1-210ENST00000481508 ICA1LQ8NDH6 482 aa9.13□□□□□ -0.95
SSBP1-210ENST00000481508 SLC30A7Q8NEW0 376 aa9.13□□□□□ -0.95
SSBP1-210ENST00000481508 SLC26A10Q8NG04 563 aa9.13□□□□□ -0.95
SSBP1-210ENST00000481508 OR2T33Q8NG76 320 aa9.13□□□□□ -0.95
SSBP1-210ENST00000481508 TEX47Q8TBZ9 253 aa9.13□□□□□ -0.95
SSBP1-210ENST00000481508 DHRS9Q9BPW9 319 aa9.13□□□□□ -0.95
SSBP1-210ENST00000481508 TRAF4Q9BUZ4 470 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms