RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 SLC22A24Q8N4F4 322 aa8.95□□□□□ -0.98
USP39-215ENST00000481409 CNEP1R1Q8N9A8 125 aa8.95□□□□□ -0.98
USP39-215ENST00000481409 GALNT11Q8NCW6 608 aa8.95□□□□□ -0.98
USP39-215ENST00000481409 OR52N5Q8NH56 324 aa8.95□□□□□ -0.98
USP39-215ENST00000481409 ZNRF4Q8WWF5 429 aa8.95□□□□□ -0.98
USP39-215ENST00000481409 NANOS1Q8WY41 292 aaKnown RBP8.95□□□□□ -0.98
USP39-215ENST00000481409 RND1Q92730 232 aa8.95□□□□□ -0.98
USP39-215ENST00000481409 MUL1Q969V5 352 aa8.95□□□□□ -0.98
USP39-215ENST00000481409 NABP1Q96AH0 204 aa8.95□□□□□ -0.98
USP39-215ENST00000481409 ZNF775Q96BV0 537 aaPredicted RBP8.95□□□□□ -0.98
USP39-215ENST00000481409 COG8Q96MW5 612 aa8.95□□□□□ -0.98
USP39-215ENST00000481409 RHNO1Q9BSD3 238 aa8.95□□□□□ -0.98
USP39-215ENST00000481409 HDHD5Q9BXW7 423 aa8.95□□□□□ -0.98
USP39-215ENST00000481409 OR10A4Q9H209 315 aa8.95□□□□□ -0.98
USP39-215ENST00000481409 TRIM36Q9NQ86 728 aa8.95□□□□□ -0.98
USP39-215ENST00000481409 FBXL3Q9UKT7 428 aa8.95□□□□□ -0.98
USP39-215ENST00000481409 CLEC4AQ9UMR7 237 aa8.95□□□□□ -0.98
USP39-215ENST00000481409 POLR1DQ9Y2S0 133 aa8.95□□□□□ -0.98
USP39-215ENST00000481409 CHD8Q9HCK8 2581 aa8.95□□□□□ -0.98
USP39-215ENST00000481409 A0A1B0GUH1 482 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 SMIM31A0A1B0GVY4 71 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 TVP23AA6NH52 213 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 METTL15A6NJ78 407 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 ZNF878C9JN71 531 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 DVL2O14641 736 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 TOXO94900 526 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 KRT8P05787 483 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 MRPL3P09001 348 aaKnown RBP8.94□□□□□ -0.98
USP39-215ENST00000481409 SPARCP09486 303 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 COX5AP20674 150 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 NAA10P41227 235 aaPredicted RBP8.94□□□□□ -0.98
USP39-215ENST00000481409 TGM4P49221 684 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 GBX2P52951 348 aaPredicted RBP8.94□□□□□ -0.98
USP39-215ENST00000481409 GRB2P62993 217 aaKnown RBP8.94□□□□□ -0.98
USP39-215ENST00000481409 HIST1H3AP68431 136 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 ZNF85Q03923 595 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 FAPQ12884 760 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 MED22Q15528 200 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 SGCAQ16586 387 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 SLC36A2Q495M3 483 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 PRR30Q53SZ7 412 aaPredicted RBP8.94□□□□□ -0.98
USP39-215ENST00000481409 ZNF684Q5T5D7 378 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 HIST2H3PS2Q5TEC6 136 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 B3GLCTQ6Y288 498 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 HIST2H3AQ71DI3 136 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 VASH1Q7L8A9 365 aaPredicted RBP8.94□□□□□ -0.98
USP39-215ENST00000481409 GPR141Q7Z602 305 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 MRGPRGQ86SM5 289 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 LHFPL3Q86UP9 236 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 GCNT2Q8N0V5 402 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 ZNF485Q8NCK3 441 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 RNF133Q8WVZ7 376 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 ITFG2Q969R8 447 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 STARD4Q96DR4 205 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 ALKBH3Q96Q83 286 aaPredicted RBP8.94□□□□□ -0.98
USP39-215ENST00000481409 OR8B4Q96RC9 309 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 DMRTA2Q96SC8 542 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 BCL7BQ9BQE9 202 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 BABAM2Q9NXR7 383 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 ELOVL5Q9NYP7 299 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 MEMO1Q9Y316 297 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 LSM2Q9Y333 95 aaKnown RBP8.94□□□□□ -0.98
USP39-215ENST00000481409 TIMM10BQ9Y5J6 103 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 ALPK2Q86TB3 2170 aa8.94□□□□□ -0.98
USP39-215ENST00000481409 ACACBO00763 2458 aa8.93□□□□□ -0.98
USP39-215ENST00000481409 ACOD1A6NK06 481 aa8.93□□□□□ -0.98
USP39-215ENST00000481409 UBL3O95164 117 aa8.93□□□□□ -0.98
USP39-215ENST00000481409 PTHP01270 115 aa8.93□□□□□ -0.98
USP39-215ENST00000481409 SCG5P05408 212 aa8.93□□□□□ -0.98
USP39-215ENST00000481409 COX5BP10606 129 aa8.93□□□□□ -0.98
USP39-215ENST00000481409 GALP22466 123 aa8.93□□□□□ -0.98
USP39-215ENST00000481409 PSMA1P25786 263 aaKnown RBP8.93□□□□□ -0.98
USP39-215ENST00000481409 ARR3P36575 388 aa8.93□□□□□ -0.98
USP39-215ENST00000481409 PIGFQ07326 219 aa8.93□□□□□ -0.98
USP39-215ENST00000481409 PMPCAQ10713 525 aa8.93□□□□□ -0.98
USP39-215ENST00000481409 EIF2B1Q14232 305 aaKnown RBP8.93□□□□□ -0.98
USP39-215ENST00000481409 TRAM1Q15629 374 aa8.93□□□□□ -0.98
USP39-215ENST00000481409 NEDD8Q15843 81 aa8.93□□□□□ -0.98
USP39-215ENST00000481409 TIGD6Q17RP2 521 aa8.93□□□□□ -0.98
USP39-215ENST00000481409 TIMM50Q3ZCQ8 353 aa8.93□□□□□ -0.98
USP39-215ENST00000481409 FDX2Q6P4F2 183 aa8.93□□□□□ -0.98
USP39-215ENST00000481409 ZNF813Q6ZN06 617 aa8.93□□□□□ -0.98
USP39-215ENST00000481409 LINGO2Q7L985 606 aa8.93□□□□□ -0.98
USP39-215ENST00000481409 SLC16A14Q7RTX9 510 aa8.93□□□□□ -0.98
USP39-215ENST00000481409 DCXRQ7Z4W1 244 aa8.93□□□□□ -0.98
USP39-215ENST00000481409 KRT77Q7Z794 578 aa8.93□□□□□ -0.98
USP39-215ENST00000481409 P2RY8Q86VZ1 359 aa8.93□□□□□ -0.98
USP39-215ENST00000481409 ALDH16A1Q8IZ83 802 aa8.93□□□□□ -0.98
USP39-215ENST00000481409 OR1K1Q8NGR3 316 aa8.93□□□□□ -0.98
USP39-215ENST00000481409 OR13F1Q8NGS4 319 aa8.93□□□□□ -0.98
USP39-215ENST00000481409 ST7LQ8TDW4 575 aa8.93□□□□□ -0.98
USP39-215ENST00000481409 THEM6Q8WUY1 208 aa8.93□□□□□ -0.98
USP39-215ENST00000481409 ASB5Q8WWX0 329 aa8.93□□□□□ -0.98
USP39-215ENST00000481409 SGCDQ92629 289 aa8.93□□□□□ -0.98
USP39-215ENST00000481409 THRSPQ92748 146 aa8.93□□□□□ -0.98
USP39-215ENST00000481409 MGLLQ99685 303 aa8.93□□□□□ -0.98
USP39-215ENST00000481409 COQ7Q99807 217 aa8.93□□□□□ -0.98
USP39-215ENST00000481409 ABHD6Q9BV23 337 aa8.93□□□□□ -0.98
USP39-215ENST00000481409 ZNF416Q9BWM5 594 aa8.93□□□□□ -0.98
USP39-215ENST00000481409 FAM192AQ9GZU8 254 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms