RNA–Protein interactions for RNA: ENST00000480179.1

PKNOX1-206, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 1,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-206ENST00000480179 UCN2Q96RP3 112 aa12.96□□□□□ -0.33
PKNOX1-206ENST00000480179 TBCCD1Q9NVR7 557 aa12.96□□□□□ -0.33
PKNOX1-206ENST00000480179 RHBDL2Q9NX52 303 aa12.96□□□□□ -0.33
PKNOX1-206ENST00000480179 ABI3Q9P2A4 366 aa12.96□□□□□ -0.33
PKNOX1-206ENST00000480179 LRP12Q9Y561 859 aa12.96□□□□□ -0.33
PKNOX1-206ENST00000480179 A0A0B4J203 849 aa12.96□□□□□ -0.34
PKNOX1-206ENST00000480179 TMEM212A6NML5 194 aa12.96□□□□□ -0.34
PKNOX1-206ENST00000480179 ZNF726A6NNF4 738 aa12.96□□□□□ -0.34
PKNOX1-206ENST00000480179 H0YC42 278 aa12.96□□□□□ -0.34
PKNOX1-206ENST00000480179 EIF1AYO14602 144 aaKnown RBP12.96□□□□□ -0.34
PKNOX1-206ENST00000480179 IL7P13232 177 aa12.96□□□□□ -0.34
PKNOX1-206ENST00000480179 SPNP16150 400 aa12.96□□□□□ -0.34
PKNOX1-206ENST00000480179 ELK1P19419 428 aa12.96□□□□□ -0.34
PKNOX1-206ENST00000480179 EIF1AXP47813 144 aaKnown RBP12.96□□□□□ -0.34
PKNOX1-206ENST00000480179 RIDAP52758 137 aaKnown RBP12.96□□□□□ -0.34
PKNOX1-206ENST00000480179 DEFA1P59665 94 aa12.96□□□□□ -0.34
PKNOX1-206ENST00000480179 DEFA3P59666 94 aa12.96□□□□□ -0.34
PKNOX1-206ENST00000480179 RAC1P63000 192 aa12.96□□□□□ -0.34
PKNOX1-206ENST00000480179 CSNK2A1P68400 391 aaPredicted RBP12.96□□□□□ -0.34
PKNOX1-206ENST00000480179 ROM1Q03395 351 aa12.96□□□□□ -0.34
PKNOX1-206ENST00000480179 RASGEF1BQ0VAM2 473 aa12.96□□□□□ -0.34
PKNOX1-206ENST00000480179 BAK1Q16611 211 aa12.96□□□□□ -0.34
PKNOX1-206ENST00000480179 WIPI1Q5MNZ9 446 aaPredicted RBP12.96□□□□□ -0.34
PKNOX1-206ENST00000480179 THEM4Q5T1C6 240 aa12.96□□□□□ -0.34
PKNOX1-206ENST00000480179 ATP1A1-AS1Q5TC04 95 aa12.96□□□□□ -0.34
PKNOX1-206ENST00000480179 CORO6Q6QEF8 472 aa12.96□□□□□ -0.34
PKNOX1-206ENST00000480179 LINC00696Q6ZRV3 163 aa12.96□□□□□ -0.34
PKNOX1-206ENST00000480179 RDH10Q8IZV5 341 aa12.96□□□□□ -0.34
PKNOX1-206ENST00000480179 SAMD12Q8N8I0 201 aa12.96□□□□□ -0.34
PKNOX1-206ENST00000480179 OR6X1Q8NH79 312 aa12.96□□□□□ -0.34
PKNOX1-206ENST00000480179 RNF128Q8TEB7 428 aa12.96□□□□□ -0.34
PKNOX1-206ENST00000480179 KCTD12Q96CX2 325 aaKnown RBP12.96□□□□□ -0.34
PKNOX1-206ENST00000480179 SFXN2Q96NB2 322 aa12.96□□□□□ -0.34
PKNOX1-206ENST00000480179 UTP23Q9BRU9 249 aaKnown RBP12.96□□□□□ -0.34
PKNOX1-206ENST00000480179 NAA11Q9BSU3 229 aaPredicted RBP12.96□□□□□ -0.34
PKNOX1-206ENST00000480179 SRXN1Q9BYN0 137 aa12.96□□□□□ -0.34
PKNOX1-206ENST00000480179 LINC00854A0A1B0GVQ3 168 aa12.95□□□□□ -0.34
PKNOX1-206ENST00000480179 A0A1W2PQ09 198 aa12.95□□□□□ -0.34
PKNOX1-206ENST00000480179 GJE1A6NN92 205 aa12.95□□□□□ -0.34
PKNOX1-206ENST00000480179 NOTOA8MTQ0 251 aa12.95□□□□□ -0.34
PKNOX1-206ENST00000480179 ZNF254O75437 659 aa12.95□□□□□ -0.34
PKNOX1-206ENST00000480179 PAHP00439 452 aa12.95□□□□□ -0.34
PKNOX1-206ENST00000480179 EIF4EP06730 217 aaKnown RBP12.95□□□□□ -0.34
PKNOX1-206ENST00000480179 ATF1P18846 271 aa12.95□□□□□ -0.34
PKNOX1-206ENST00000480179 CNR1P21554 472 aa12.95□□□□□ -0.34
PKNOX1-206ENST00000480179 RBMS1P29558 406 aaKnown RBP12.95□□□□□ -0.34
PKNOX1-206ENST00000480179 CLDN20P56880 219 aa12.95□□□□□ -0.34
PKNOX1-206ENST00000480179 AIMP2Q13155 320 aaKnown RBP12.95□□□□□ -0.34
PKNOX1-206ENST00000480179 IL18Q14116 193 aa12.95□□□□□ -0.34
PKNOX1-206ENST00000480179 TGIF1Q15583 401 aa12.95□□□□□ -0.34
PKNOX1-206ENST00000480179 TAB1Q15750 504 aa12.95□□□□□ -0.34
PKNOX1-206ENST00000480179 Q499Y3 187 aa12.95□□□□□ -0.34
PKNOX1-206ENST00000480179 CEP78Q5JTW2 689 aa12.95□□□□□ -0.34
PKNOX1-206ENST00000480179 UBQLNLQ8IYU4 475 aa12.95□□□□□ -0.34
PKNOX1-206ENST00000480179 ZNF433Q8N7K0 673 aaPredicted RBP12.95□□□□□ -0.34
PKNOX1-206ENST00000480179 PHYHIPQ92561 330 aa12.95□□□□□ -0.34
PKNOX1-206ENST00000480179 SIGLEC12Q96PQ1 595 aa12.95□□□□□ -0.34
PKNOX1-206ENST00000480179 HES7Q9BYE0 225 aa12.95□□□□□ -0.34
PKNOX1-206ENST00000480179 SEC61A2Q9H9S3 476 aa12.95□□□□□ -0.34
PKNOX1-206ENST00000480179 EMC7Q9NPA0 242 aa12.95□□□□□ -0.34
PKNOX1-206ENST00000480179 PLA2G3Q9NZ20 509 aa12.95□□□□□ -0.34
PKNOX1-206ENST00000480179 KLHL9Q9P2J3 617 aa12.95□□□□□ -0.34
PKNOX1-206ENST00000480179 FBXL3Q9UKT7 428 aa12.95□□□□□ -0.34
PKNOX1-206ENST00000480179 BOKQ9UMX3 212 aaPredicted RBP12.95□□□□□ -0.34
PKNOX1-206ENST00000480179 SLC22A13Q9Y226 551 aa12.95□□□□□ -0.34
PKNOX1-206ENST00000480179 POLR1DQ9Y2S0 133 aa12.95□□□□□ -0.34
PKNOX1-206ENST00000480179 TRBV5-5A0A0J9YX44 114 aa12.94□□□□□ -0.34
PKNOX1-206ENST00000480179 LOC102725191A0A1B0GVB3 256 aa12.94□□□□□ -0.34
PKNOX1-206ENST00000480179 EIF1BO60739 113 aaKnown RBP12.94□□□□□ -0.34
PKNOX1-206ENST00000480179 AQP8O94778 261 aa12.94□□□□□ -0.34
PKNOX1-206ENST00000480179 ZNF432O94892 652 aa12.94□□□□□ -0.34
PKNOX1-206ENST00000480179 PNPP00491 289 aa12.94□□□□□ -0.34
PKNOX1-206ENST00000480179 HRGP04196 525 aa12.94□□□□□ -0.34
PKNOX1-206ENST00000480179 EPXP11678 715 aa12.94□□□□□ -0.34
PKNOX1-206ENST00000480179 SNRPBP14678 240 aaKnown RBP12.94□□□□□ -0.34
PKNOX1-206ENST00000480179 SRMP19623 302 aa12.94□□□□□ -0.34
PKNOX1-206ENST00000480179 APEX1P27695 318 aaKnown RBP12.94□□□□□ -0.34
PKNOX1-206ENST00000480179 LAP3P28838 519 aa12.94□□□□□ -0.34
PKNOX1-206ENST00000480179 RFC3P40938 356 aa12.94□□□□□ -0.34
PKNOX1-206ENST00000480179 EIF2S3P41091 472 aaKnown RBP12.94□□□□□ -0.34
PKNOX1-206ENST00000480179 EVX1P49640 407 aa12.94□□□□□ -0.34
PKNOX1-206ENST00000480179 H3F3AP84243 136 aa12.94□□□□□ -0.34
PKNOX1-206ENST00000480179 RTP5Q14D33 572 aa12.94□□□□□ -0.34
PKNOX1-206ENST00000480179 P2RY14Q15391 338 aa12.94□□□□□ -0.34
PKNOX1-206ENST00000480179 OR1C1Q15619 314 aa12.94□□□□□ -0.34
PKNOX1-206ENST00000480179 FDX2Q6P4F2 183 aa12.94□□□□□ -0.34
PKNOX1-206ENST00000480179 GDPD1Q8N9F7 314 aa12.94□□□□□ -0.34
PKNOX1-206ENST00000480179 DTX3Q8N9I9 347 aa12.94□□□□□ -0.34
PKNOX1-206ENST00000480179 OR51A4Q8NGJ6 313 aa12.94□□□□□ -0.34
PKNOX1-206ENST00000480179 ST7LQ8TDW4 575 aa12.94□□□□□ -0.34
PKNOX1-206ENST00000480179 TSEN15Q8WW01 171 aaKnown RBP12.94□□□□□ -0.34
PKNOX1-206ENST00000480179 KIAA1143Q96AT1 154 aaPredicted RBP12.94□□□□□ -0.34
PKNOX1-206ENST00000480179 IP6K3Q96PC2 410 aa12.94□□□□□ -0.34
PKNOX1-206ENST00000480179 FAM117AQ9C073 453 aa12.94□□□□□ -0.34
PKNOX1-206ENST00000480179 B3GNT4Q9C0J1 378 aa12.94□□□□□ -0.34
PKNOX1-206ENST00000480179 SP140LQ9H930 580 aa12.94□□□□□ -0.34
PKNOX1-206ENST00000480179 ZFP64Q9NPA5 681 aa12.94□□□□□ -0.34
PKNOX1-206ENST00000480179 EXTL2Q9UBQ6 330 aa12.94□□□□□ -0.34
PKNOX1-206ENST00000480179 TBC1D24Q9ULP9 559 aa12.94□□□□□ -0.34
PKNOX1-206ENST00000480179 CNTRLQ7Z7A1 2325 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms