RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 ZP4Q12836 540 aa22.12■■□□□ 1.13
SYNGAP1-206ENST00000479510 WDR45BQ5MNZ6 344 aa22.12■■□□□ 1.13
SYNGAP1-206ENST00000479510 YOD1Q5VVQ6 348 aaPredicted RBP22.12■■□□□ 1.13
SYNGAP1-206ENST00000479510 DEGS2Q6QHC5 323 aa22.12■■□□□ 1.13
SYNGAP1-206ENST00000479510 TSSK4Q6SA08 328 aa22.12■■□□□ 1.13
SYNGAP1-206ENST00000479510 ZNF248Q8NDW4 579 aa22.12■■□□□ 1.13
SYNGAP1-206ENST00000479510 TNFAIP8L1Q8WVP5 186 aa22.12■■□□□ 1.13
SYNGAP1-206ENST00000479510 TMEM234Q8WY98 164 aa22.12■■□□□ 1.13
SYNGAP1-206ENST00000479510 SEH1LQ96EE3 360 aa22.12■■□□□ 1.13
SYNGAP1-206ENST00000479510 ZNF224Q9NZL3 707 aa22.12■■□□□ 1.13
SYNGAP1-206ENST00000479510 GTF2A1LQ9UNN4 478 aa22.12■■□□□ 1.13
SYNGAP1-206ENST00000479510 CDC14CA4D256 554 aa22.11■■□□□ 1.13
SYNGAP1-206ENST00000479510 METTL12A8MUP2 240 aa22.11■■□□□ 1.13
SYNGAP1-206ENST00000479510 GMFGO60234 142 aa22.11■■□□□ 1.13
SYNGAP1-206ENST00000479510 DOK2O60496 412 aa22.11■■□□□ 1.13
SYNGAP1-206ENST00000479510 ZNF35P13682 527 aa22.11■■□□□ 1.13
SYNGAP1-206ENST00000479510 HNRNPKP61978 463 aaKnown RBP eCLIP22.11■■□□□ 1.13
SYNGAP1-206ENST00000479510 PCK2Q16822 640 aa22.11■■□□□ 1.13
SYNGAP1-206ENST00000479510 TMEM205Q6UW68 189 aa22.11■■□□□ 1.13
SYNGAP1-206ENST00000479510 ADGRE4PQ86SQ3 457 aa22.11■■□□□ 1.13
SYNGAP1-206ENST00000479510 PCED1AQ9H1Q7 454 aa22.11■■□□□ 1.13
SYNGAP1-206ENST00000479510 SPEF1Q9Y4P9 236 aa22.11■■□□□ 1.13
SYNGAP1-206ENST00000479510 LDLRAD4O15165 306 aa22.11■■□□□ 1.13
SYNGAP1-206ENST00000479510 AQP8O94778 261 aa22.11■■□□□ 1.13
SYNGAP1-206ENST00000479510 FBXO45P0C2W1 286 aa22.11■■□□□ 1.13
SYNGAP1-206ENST00000479510 PTGS2P35354 604 aa22.11■■□□□ 1.13
SYNGAP1-206ENST00000479510 OR7E24Q6IFN5 339 aa22.11■■□□□ 1.13
SYNGAP1-206ENST00000479510 TMEM65Q6PI78 240 aa22.11■■□□□ 1.13
SYNGAP1-206ENST00000479510 ZNF704Q6ZNC4 412 aaPredicted RBP22.11■■□□□ 1.13
SYNGAP1-206ENST00000479510 CHMP1BQ7LBR1 199 aa22.11■■□□□ 1.13
SYNGAP1-206ENST00000479510 NKAIN3Q8N8D7 197 aa22.11■■□□□ 1.13
SYNGAP1-206ENST00000479510 FOXRED1Q96CU9 486 aaPredicted RBP22.11■■□□□ 1.13
SYNGAP1-206ENST00000479510 TAS2R4Q9NYW5 299 aa22.11■■□□□ 1.13
SYNGAP1-206ENST00000479510 LOC390937A0A1W2PQ73 354 aa22.1■■□□□ 1.13
SYNGAP1-206ENST00000479510 FTCDNL1E5RQL4 147 aa22.1■■□□□ 1.13
SYNGAP1-206ENST00000479510 H3BSH0 61 aa22.1■■□□□ 1.13
SYNGAP1-206ENST00000479510 GOSR2O14653 212 aa22.1■■□□□ 1.13
SYNGAP1-206ENST00000479510 ACSM4P0C7M7 580 aa22.1■■□□□ 1.13
SYNGAP1-206ENST00000479510 TDGQ13569 410 aa22.1■■□□□ 1.13
SYNGAP1-206ENST00000479510 C1orf100Q5SVJ3 147 aa22.1■■□□□ 1.13
SYNGAP1-206ENST00000479510 PLPP7Q8NBV4 271 aa22.1■■□□□ 1.13
SYNGAP1-206ENST00000479510 RLN3Q8WXF3 142 aa22.1■■□□□ 1.13
SYNGAP1-206ENST00000479510 SLC25A44Q96H78 314 aaPredicted RBP22.1■■□□□ 1.13
SYNGAP1-206ENST00000479510 SEMA5BQ9P283 1151 aa22.1■■□□□ 1.13
SYNGAP1-206ENST00000479510 DHCR7Q9UBM7 475 aaKnown RBP22.1■■□□□ 1.13
SYNGAP1-206ENST00000479510 LOC105371267A0A1B0GV96 52 aa22.1■■□□□ 1.13
SYNGAP1-206ENST00000479510 MFSD2BA6NFX1 497 aa22.1■■□□□ 1.13
SYNGAP1-206ENST00000479510 ARPC5O15511 151 aa22.1■■□□□ 1.13
SYNGAP1-206ENST00000479510 RAB3DO95716 219 aa22.1■■□□□ 1.13
SYNGAP1-206ENST00000479510 RPA2P15927 270 aa22.1■■□□□ 1.13
SYNGAP1-206ENST00000479510 GLYATL3Q5SZD4 288 aa22.1■■□□□ 1.13
SYNGAP1-206ENST00000479510 RGS7BPQ6MZT1 257 aaPredicted RBP22.1■■□□□ 1.13
SYNGAP1-206ENST00000479510 D2HGDHQ8N465 521 aa22.1■■□□□ 1.13
SYNGAP1-206ENST00000479510 OR1L3Q8NH93 324 aa22.1■■□□□ 1.13
SYNGAP1-206ENST00000479510 PCNPQ8WW12 178 aaKnown RBP22.1■■□□□ 1.13
SYNGAP1-206ENST00000479510 ST8SIA1Q92185 356 aa22.1■■□□□ 1.13
SYNGAP1-206ENST00000479510 REG4Q9BYZ8 158 aa22.1■■□□□ 1.13
SYNGAP1-206ENST00000479510 TMEM138Q9NPI0 162 aa22.1■■□□□ 1.13
SYNGAP1-206ENST00000479510 SESN1Q9Y6P5 492 aa22.1■■□□□ 1.13
SYNGAP1-206ENST00000479510 CPAMD8Q8IZJ3 1885 aa22.09■■□□□ 1.13
SYNGAP1-206ENST00000479510 ZNF823P16415 610 aa22.09■■□□□ 1.13
SYNGAP1-206ENST00000479510 RAB6AP20340 208 aa22.09■■□□□ 1.13
SYNGAP1-206ENST00000479510 ZP3P21754 424 aa22.09■■□□□ 1.13
SYNGAP1-206ENST00000479510 DNASE1L1P49184 302 aa22.09■■□□□ 1.13
SYNGAP1-206ENST00000479510 ARRB1P49407 418 aaPredicted RBP22.09■■□□□ 1.13
SYNGAP1-206ENST00000479510 EFNA3P52797 238 aa22.09■■□□□ 1.13
SYNGAP1-206ENST00000479510 C4orf46Q504U0 113 aa22.09■■□□□ 1.13
SYNGAP1-206ENST00000479510 TMEM244Q5VVB8 128 aa22.09■■□□□ 1.13
SYNGAP1-206ENST00000479510 MYO9BQ13459 2157 aa22.08■■□□□ 1.13
SYNGAP1-206ENST00000479510 CD74P04233 296 aa22.08■■□□□ 1.13
SYNGAP1-206ENST00000479510 NMBP08949 121 aa22.08■■□□□ 1.13
SYNGAP1-206ENST00000479510 DAP3P51398 398 aaKnown RBP22.08■■□□□ 1.13
SYNGAP1-206ENST00000479510 ETFDHQ16134 617 aa22.08■■□□□ 1.13
SYNGAP1-206ENST00000479510 C2orf68Q2NKX9 166 aa22.08■■□□□ 1.13
SYNGAP1-206ENST00000479510 DEFB133Q30KQ1 61 aa22.08■■□□□ 1.13
SYNGAP1-206ENST00000479510 PLXDC1Q8IUK5 500 aa22.08■■□□□ 1.13
SYNGAP1-206ENST00000479510 PLPP5Q8NEB5 264 aa22.08■■□□□ 1.13
SYNGAP1-206ENST00000479510 SLC26A10Q8NG04 563 aa22.08■■□□□ 1.13
SYNGAP1-206ENST00000479510 WDR89Q96FK6 387 aaPredicted RBP22.08■■□□□ 1.13
SYNGAP1-206ENST00000479510 SDHAF2Q9NX18 166 aa22.08■■□□□ 1.13
SYNGAP1-206ENST00000479510 COA3Q9Y2R0 106 aaPredicted RBP22.08■■□□□ 1.13
SYNGAP1-206ENST00000479510 TMEM82A0PJX8 343 aa22.08■■□□□ 1.12
SYNGAP1-206ENST00000479510 GK2Q14410 553 aaPredicted RBP22.08■■□□□ 1.12
SYNGAP1-206ENST00000479510 CLVS2Q5SYC1 327 aa22.08■■□□□ 1.12
SYNGAP1-206ENST00000479510 GSG1LQ6UXU4 331 aa22.08■■□□□ 1.12
SYNGAP1-206ENST00000479510 ZSCAN2Q7Z7L9 614 aaPredicted RBP22.08■■□□□ 1.12
SYNGAP1-206ENST00000479510 OR13C3Q8NGS6 347 aa22.08■■□□□ 1.12
SYNGAP1-206ENST00000479510 FOXN4Q96NZ1 517 aa22.08■■□□□ 1.12
SYNGAP1-206ENST00000479510 VN1R1Q9GZP7 353 aa22.08■■□□□ 1.12
SYNGAP1-206ENST00000479510 ARL6Q9H0F7 186 aa22.08■■□□□ 1.12
SYNGAP1-206ENST00000479510 FXYD6-FXYD2A0A087WZ82 144 aa22.07■■□□□ 1.12
SYNGAP1-206ENST00000479510 A0A1B0GX78 115 aa22.07■■□□□ 1.12
SYNGAP1-206ENST00000479510 RFPL4AA6NLU0 287 aa22.07■■□□□ 1.12
SYNGAP1-206ENST00000479510 C17orf51A8MQB3 221 aa22.07■■□□□ 1.12
SYNGAP1-206ENST00000479510 RFPL4AL1F8VTS6 287 aa22.07■■□□□ 1.12
SYNGAP1-206ENST00000479510 WISP1O95388 367 aa22.07■■□□□ 1.12
SYNGAP1-206ENST00000479510 SIX6O95475 246 aa22.07■■□□□ 1.12
SYNGAP1-206ENST00000479510 UBCP0CG48 685 aaKnown RBP22.07■■□□□ 1.12
SYNGAP1-206ENST00000479510 SUMO3P55854 103 aaPredicted RBP22.07■■□□□ 1.12
SYNGAP1-206ENST00000479510 VWA2Q5GFL6 755 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms