RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 MRGPRFQ96AM1 343 aa19.22■□□□□ 0.67
SDF4-206ENST00000478938 PRODH2Q9UF12 536 aa19.22■□□□□ 0.67
SDF4-206ENST00000478938 FEZF1A0PJY2 475 aa19.21■□□□□ 0.67
SDF4-206ENST00000478938 CYB5AP00167 134 aa19.21■□□□□ 0.67
SDF4-206ENST00000478938 GJA4P35212 333 aa19.21■□□□□ 0.67
SDF4-206ENST00000478938 ELOCQ15369 112 aa19.21■□□□□ 0.67
SDF4-206ENST00000478938 RAB24Q969Q5 203 aa19.21■□□□□ 0.67
SDF4-206ENST00000478938 DDA1Q9BW61 102 aa19.21■□□□□ 0.67
SDF4-206ENST00000478938 MS4A8Q9BY19 250 aa19.21■□□□□ 0.67
SDF4-206ENST00000478938 EIF5A2Q9GZV4 153 aaKnown RBP19.21■□□□□ 0.67
SDF4-206ENST00000478938 PRSS16Q9NQE7 514 aa19.21■□□□□ 0.67
SDF4-206ENST00000478938 PCYT1BQ9Y5K3 369 aaPredicted RBP19.21■□□□□ 0.67
SDF4-206ENST00000478938 TRPV2Q9Y5S1 764 aa19.21■□□□□ 0.67
SDF4-206ENST00000478938 POLR2AP24928 1970 aaKnown RBP19.21■□□□□ 0.67
SDF4-206ENST00000478938 ZNF727A8MUV8 499 aa19.21■□□□□ 0.67
SDF4-206ENST00000478938 M0QZ92 97 aa19.21■□□□□ 0.67
SDF4-206ENST00000478938 GPANK1O95872 356 aa19.21■□□□□ 0.67
SDF4-206ENST00000478938 PBX2P40425 430 aa19.21■□□□□ 0.67
SDF4-206ENST00000478938 GNG10P50151 68 aa19.21■□□□□ 0.67
SDF4-206ENST00000478938 RPP30P78346 268 aaKnown RBP19.21■□□□□ 0.67
SDF4-206ENST00000478938 MLC1Q15049 377 aa19.21■□□□□ 0.67
SDF4-206ENST00000478938 GUK1Q16774 197 aa19.21■□□□□ 0.67
SDF4-206ENST00000478938 LRRC18Q8N456 261 aa19.21■□□□□ 0.67
SDF4-206ENST00000478938 ZNF615Q8N8J6 731 aa19.21■□□□□ 0.67
SDF4-206ENST00000478938 RPS4Y2Q8TD47 263 aa19.21■□□□□ 0.67
SDF4-206ENST00000478938 UBE2E3Q969T4 207 aa19.21■□□□□ 0.67
SDF4-206ENST00000478938 SLC25A36Q96CQ1 311 aa19.21■□□□□ 0.67
SDF4-206ENST00000478938 PACRGQ96M98 296 aaPredicted RBP19.21■□□□□ 0.67
SDF4-206ENST00000478938 WDR92Q96MX6 357 aa19.21■□□□□ 0.67
SDF4-206ENST00000478938 TNFRSF13CQ96RJ3 184 aa19.21■□□□□ 0.67
SDF4-206ENST00000478938 LMF1Q96S06 567 aa19.21■□□□□ 0.67
SDF4-206ENST00000478938 RHBGQ9H310 441 aa19.21■□□□□ 0.67
SDF4-206ENST00000478938 ARID1AO14497 2285 aa19.21■□□□□ 0.67
SDF4-206ENST00000478938 HIST1H1CP16403 213 aaKnown RBP19.2■□□□□ 0.66
SDF4-206ENST00000478938 CD81P60033 236 aa19.2■□□□□ 0.66
SDF4-206ENST00000478938 HNRNPKP61978 463 aaKnown RBP eCLIP19.2■□□□□ 0.66
SDF4-206ENST00000478938 NKX6-1P78426 367 aaPredicted RBP19.2■□□□□ 0.66
SDF4-206ENST00000478938 TAF1CQ15572 869 aaPredicted RBP19.2■□□□□ 0.66
SDF4-206ENST00000478938 AWAT2Q6E213 333 aa19.2■□□□□ 0.66
SDF4-206ENST00000478938 ZNF664Q8N3J9 261 aa19.2■□□□□ 0.66
SDF4-206ENST00000478938 DCAF4L2Q8NA75 395 aa19.2■□□□□ 0.66
SDF4-206ENST00000478938 OR6K6Q8NGW6 343 aa19.2■□□□□ 0.66
SDF4-206ENST00000478938 WFIKKN2Q8TEU8 576 aa19.2■□□□□ 0.66
SDF4-206ENST00000478938 SLC5A7Q9GZV3 580 aa19.2■□□□□ 0.66
SDF4-206ENST00000478938 YBX2Q9Y2T7 364 aaKnown RBP19.2■□□□□ 0.66
SDF4-206ENST00000478938 STARD10Q9Y365 291 aa19.2■□□□□ 0.66
SDF4-206ENST00000478938 SCN5AQ14524 2016 aa19.2■□□□□ 0.66
SDF4-206ENST00000478938 A0A087WV62 115 aa19.2■□□□□ 0.66
SDF4-206ENST00000478938 ZNF724A8MTY0 619 aa19.2■□□□□ 0.66
SDF4-206ENST00000478938 ADAM10O14672 748 aa19.2■□□□□ 0.66
SDF4-206ENST00000478938 TSPAN15O95858 294 aa19.2■□□□□ 0.66
SDF4-206ENST00000478938 CXCL1P09341 107 aa19.2■□□□□ 0.66
SDF4-206ENST00000478938 OR8G3PP0DMU2 310 aa19.2■□□□□ 0.66
SDF4-206ENST00000478938 C2orf76Q3KRA6 126 aa19.2■□□□□ 0.66
SDF4-206ENST00000478938 MIDNQ504T8 468 aa19.2■□□□□ 0.66
SDF4-206ENST00000478938 ACOT4Q8N9L9 421 aa19.2■□□□□ 0.66
SDF4-206ENST00000478938 OR51A4Q8NGJ6 313 aa19.2■□□□□ 0.66
SDF4-206ENST00000478938 OR51F2Q8NH61 342 aa19.2■□□□□ 0.66
SDF4-206ENST00000478938 FAM86C1Q9NVL1 165 aa19.2■□□□□ 0.66
SDF4-206ENST00000478938 CALML5Q9NZT1 146 aa19.2■□□□□ 0.66
SDF4-206ENST00000478938 NME2P1O60361 137 aa19.19■□□□□ 0.66
SDF4-206ENST00000478938 STATHP02808 62 aa19.19■□□□□ 0.66
SDF4-206ENST00000478938 OR13C7P0DN81 318 aa19.19■□□□□ 0.66
SDF4-206ENST00000478938 APLNRP35414 380 aa19.19■□□□□ 0.66
SDF4-206ENST00000478938 SSBP1Q04837 148 aaKnown RBP19.19■□□□□ 0.66
SDF4-206ENST00000478938 RANBP3LQ86VV4 465 aaPredicted RBP19.19■□□□□ 0.66
SDF4-206ENST00000478938 NAXEQ8NCW5 288 aa19.19■□□□□ 0.66
SDF4-206ENST00000478938 OR5R1Q8NH85 324 aa19.19■□□□□ 0.66
SDF4-206ENST00000478938 OR5AK2Q8NH90 309 aa19.19■□□□□ 0.66
SDF4-206ENST00000478938 MUCL1Q96DR8 90 aa19.19■□□□□ 0.66
SDF4-206ENST00000478938 PTPN18Q99952 460 aa19.19■□□□□ 0.66
SDF4-206ENST00000478938 SCRT1Q9BWW7 348 aa19.19■□□□□ 0.66
SDF4-206ENST00000478938 PUS1Q9Y606 427 aaKnown RBP eCLIP19.19■□□□□ 0.66
SDF4-206ENST00000478938 FAM171A2A8MVW0 826 aa19.19■□□□□ 0.66
SDF4-206ENST00000478938 LEFTY2O00292 366 aa19.19■□□□□ 0.66
SDF4-206ENST00000478938 P2RX6O15547 441 aa19.19■□□□□ 0.66
SDF4-206ENST00000478938 ERCC1P07992 297 aaPredicted RBP19.19■□□□□ 0.66
SDF4-206ENST00000478938 CKBP12277 381 aa19.19■□□□□ 0.66
SDF4-206ENST00000478938 AK4P27144 223 aaPredicted RBP19.19■□□□□ 0.66
SDF4-206ENST00000478938 MC3RP41968 323 aa19.19■□□□□ 0.66
SDF4-206ENST00000478938 BPIFB3P59826 476 aa19.19■□□□□ 0.66
SDF4-206ENST00000478938 RNASE10Q5GAN6 216 aaKnown RBP19.19■□□□□ 0.66
SDF4-206ENST00000478938 PRAMEF8Q5VWM4 474 aa19.19■□□□□ 0.66
SDF4-206ENST00000478938 PRAMEF7Q5VXH5 474 aa19.19■□□□□ 0.66
SDF4-206ENST00000478938 BSCL2Q96G97 398 aaPredicted RBP19.19■□□□□ 0.66
SDF4-206ENST00000478938 SNHG12Q9BXW3 62 aa19.19■□□□□ 0.66
SDF4-206ENST00000478938 IL36AQ9UHA7 158 aa19.19■□□□□ 0.66
SDF4-206ENST00000478938 KLK13Q9UKR3 277 aa19.19■□□□□ 0.66
SDF4-206ENST00000478938 HS3ST3B1Q9Y662 390 aa19.19■□□□□ 0.66
SDF4-206ENST00000478938 URGCP-MRPS24S4R325 110 aa19.19■□□□□ 0.66
SDF4-206ENST00000478938 SLC38A8A6NNN8 435 aa19.18■□□□□ 0.66
SDF4-206ENST00000478938 CDC40O60508 579 aaKnown RBP eCLIP19.18■□□□□ 0.66
SDF4-206ENST00000478938 F13BP05160 661 aa19.18■□□□□ 0.66
SDF4-206ENST00000478938 NPSP0C0P6 89 aa19.18■□□□□ 0.66
SDF4-206ENST00000478938 SNCAP37840 140 aa19.18■□□□□ 0.66
SDF4-206ENST00000478938 C9orf64Q5T6V5 341 aa19.18■□□□□ 0.66
SDF4-206ENST00000478938 EIF5AL1Q6IS14 154 aaKnown RBP19.18■□□□□ 0.66
SDF4-206ENST00000478938 Q6ZVL8 140 aa19.18■□□□□ 0.66
SDF4-206ENST00000478938 FAM129CQ86XR2 697 aa19.18■□□□□ 0.66
SDF4-206ENST00000478938 CDK20Q8IZL9 346 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms