RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 ARL9Q6T311 187 aa11.22□□□□□ -0.61
VCL-205ENST00000478896 ZER1Q7Z7L7 766 aa11.22□□□□□ -0.61
VCL-205ENST00000478896 IGFN1Q86VF2 1251 aa11.22□□□□□ -0.61
VCL-205ENST00000478896 CLDN22Q8N7P3 220 aa11.22□□□□□ -0.61
VCL-205ENST00000478896 ZDHHC22Q8N966 263 aa11.22□□□□□ -0.61
VCL-205ENST00000478896 FNDC8Q8TC99 324 aa11.22□□□□□ -0.61
VCL-205ENST00000478896 LIPHQ8WWY8 451 aa11.22□□□□□ -0.61
VCL-205ENST00000478896 C4orf45Q96LM5 186 aa11.22□□□□□ -0.61
VCL-205ENST00000478896 MAGEB18Q96M61 343 aa11.22□□□□□ -0.61
VCL-205ENST00000478896 DCLRE1CQ96SD1 692 aaKnown RBP11.22□□□□□ -0.61
VCL-205ENST00000478896 DIRC2Q96SL1 478 aa11.22□□□□□ -0.61
VCL-205ENST00000478896 WNT5BQ9H1J7 359 aa11.22□□□□□ -0.61
VCL-205ENST00000478896 ESM1Q9NQ30 184 aa11.22□□□□□ -0.61
VCL-205ENST00000478896 HIF3AQ9Y2N7 669 aa11.22□□□□□ -0.61
VCL-205ENST00000478896 TIMM10BQ9Y5J6 103 aa11.22□□□□□ -0.61
VCL-205ENST00000478896 NPTNQ9Y639 398 aa11.22□□□□□ -0.61
VCL-205ENST00000478896 ABHD16AO95870 558 aa11.21□□□□□ -0.61
VCL-205ENST00000478896 NGFP01138 241 aa11.21□□□□□ -0.61
VCL-205ENST00000478896 ADH4P08319 380 aa11.21□□□□□ -0.61
VCL-205ENST00000478896 CST2P09228 141 aa11.21□□□□□ -0.61
VCL-205ENST00000478896 SBK2P0C263 348 aa11.21□□□□□ -0.61
VCL-205ENST00000478896 THRBP10828 461 aa11.21□□□□□ -0.61
VCL-205ENST00000478896 GSTM3P21266 225 aa11.21□□□□□ -0.61
VCL-205ENST00000478896 MSR1P21757 451 aa11.21□□□□□ -0.61
VCL-205ENST00000478896 TNFSF4P23510 183 aa11.21□□□□□ -0.61
VCL-205ENST00000478896 CTXN1P60606 82 aa11.21□□□□□ -0.61
VCL-205ENST00000478896 ST3GAL3Q11203 375 aa11.21□□□□□ -0.61
VCL-205ENST00000478896 FAM205BPQ63HN1 556 aa11.21□□□□□ -0.61
VCL-205ENST00000478896 ZNF774Q6NX45 483 aa11.21□□□□□ -0.61
VCL-205ENST00000478896 MICU2Q8IYU8 434 aa11.21□□□□□ -0.61
VCL-205ENST00000478896 KLHL36Q8N4N3 616 aa11.21□□□□□ -0.61
VCL-205ENST00000478896 SPICQ8N5J4 248 aa11.21□□□□□ -0.61
VCL-205ENST00000478896 OR8J3Q8NGG0 315 aa11.21□□□□□ -0.61
VCL-205ENST00000478896 POP5Q969H6 163 aaKnown RBP11.21□□□□□ -0.61
VCL-205ENST00000478896 NMD3Q96D46 503 aaKnown RBP11.21□□□□□ -0.61
VCL-205ENST00000478896 BPIFA2Q96DR5 249 aa11.21□□□□□ -0.61
VCL-205ENST00000478896 TPD52L3Q96J77 140 aa11.21□□□□□ -0.61
VCL-205ENST00000478896 PRRC1Q96M27 445 aa11.21□□□□□ -0.61
VCL-205ENST00000478896 SIKE1Q9BRV8 207 aa11.21□□□□□ -0.61
VCL-205ENST00000478896 TMEM106BQ9NUM4 274 aa11.21□□□□□ -0.61
VCL-205ENST00000478896 PURGQ9UJV8 347 aaKnown RBP11.21□□□□□ -0.61
VCL-205ENST00000478896 NDRG4Q9ULP0 352 aaKnown RBP11.21□□□□□ -0.61
VCL-205ENST00000478896 C12orf71A8MTZ7 269 aa11.2□□□□□ -0.62
VCL-205ENST00000478896 FBP2O00757 339 aa11.2□□□□□ -0.62
VCL-205ENST00000478896 DOK2O60496 412 aa11.2□□□□□ -0.62
VCL-205ENST00000478896 IGHMP01871 453 aa11.2□□□□□ -0.62
VCL-205ENST00000478896 CD55P08174 381 aa11.2□□□□□ -0.62
VCL-205ENST00000478896 TSPAN19P0C672 248 aa11.2□□□□□ -0.62
VCL-205ENST00000478896 TNFRSF1AP19438 455 aa11.2□□□□□ -0.62
VCL-205ENST00000478896 HNRNPA0Q13151 305 aaKnown RBP11.2□□□□□ -0.62
VCL-205ENST00000478896 SPRNQ5BIV9 151 aa11.2□□□□□ -0.62
VCL-205ENST00000478896 SIGLECL1Q8N7X8 197 aa11.2□□□□□ -0.62
VCL-205ENST00000478896 NPEPL1Q8NDH3 523 aa11.2□□□□□ -0.62
VCL-205ENST00000478896 OR2Z1Q8NG97 314 aa11.2□□□□□ -0.62
VCL-205ENST00000478896 LRRC58Q96CX6 371 aa11.2□□□□□ -0.62
VCL-205ENST00000478896 MRI1Q9BV20 369 aa11.2□□□□□ -0.62
VCL-205ENST00000478896 DCAF16Q9NXF7 216 aa11.2□□□□□ -0.62
VCL-205ENST00000478896 OPN4Q9UHM6 478 aa11.2□□□□□ -0.62
VCL-205ENST00000478896 PCDHGB1Q9Y5G3 927 aa11.2□□□□□ -0.62
VCL-205ENST00000478896 NBEAL1Q6ZS30 2694 aa11.2□□□□□ -0.62
VCL-205ENST00000478896 PPIAL4EA0A075B759 164 aa11.19□□□□□ -0.62
VCL-205ENST00000478896 TRAV27A0A087WT01 109 aa11.19□□□□□ -0.62
VCL-205ENST00000478896 PPIAL4CA0A0B4J2A2 164 aa11.19□□□□□ -0.62
VCL-205ENST00000478896 A6NIZ1 184 aa11.19□□□□□ -0.62
VCL-205ENST00000478896 HMGB1P1B2RPK0 211 aaPredicted RBP11.19□□□□□ -0.62
VCL-205ENST00000478896 PPIAL4DF5H284 164 aa11.19□□□□□ -0.62
VCL-205ENST00000478896 H7C1C5 153 aa11.19□□□□□ -0.62
VCL-205ENST00000478896 MRASO14807 208 aa11.19□□□□□ -0.62
VCL-205ENST00000478896 ICMTO60725 284 aa11.19□□□□□ -0.62
VCL-205ENST00000478896 EDF1O60869 148 aaKnown RBP11.19□□□□□ -0.62
VCL-205ENST00000478896 FSHBP01225 129 aa11.19□□□□□ -0.62
VCL-205ENST00000478896 IGHV2-70P01814 119 aa11.19□□□□□ -0.62
VCL-205ENST00000478896 PPIAL4FP0DN26 164 aa11.19□□□□□ -0.62
VCL-205ENST00000478896 ZFP36P26651 326 aaKnown RBP11.19□□□□□ -0.62
VCL-205ENST00000478896 HTR5AP47898 357 aa11.19□□□□□ -0.62
VCL-205ENST00000478896 RAP1BP61224 184 aa11.19□□□□□ -0.62
VCL-205ENST00000478896 LCN6P62502 163 aa11.19□□□□□ -0.62
VCL-205ENST00000478896 RAP1AP62834 184 aa11.19□□□□□ -0.62
VCL-205ENST00000478896 SCRN3Q0VDG4 424 aa11.19□□□□□ -0.62
VCL-205ENST00000478896 FOXL1Q12952 345 aa11.19□□□□□ -0.62
VCL-205ENST00000478896 ENDOGQ14249 297 aaKnown RBP11.19□□□□□ -0.62
VCL-205ENST00000478896 CYBRD1Q53TN4 286 aa11.19□□□□□ -0.62
VCL-205ENST00000478896 METTL21CQ5VZV1 264 aa11.19□□□□□ -0.62
VCL-205ENST00000478896 CALHM3Q86XJ0 350 aa11.19□□□□□ -0.62
VCL-205ENST00000478896 OR51A7Q8NH64 312 aa11.19□□□□□ -0.62
VCL-205ENST00000478896 DUX5Q96PT3 197 aa11.19□□□□□ -0.62
VCL-205ENST00000478896 EGFL7Q9UHF1 273 aa11.19□□□□□ -0.62
VCL-205ENST00000478896 NUP50Q9UKX7 468 aa11.19□□□□□ -0.62
VCL-205ENST00000478896 AUP1Q9Y679 476 aa11.19□□□□□ -0.62
VCL-205ENST00000478896 BBIP1A8MTZ0 92 aa11.18□□□□□ -0.62
VCL-205ENST00000478896 EFCAB9A8MZ26 197 aa11.18□□□□□ -0.62
VCL-205ENST00000478896 FAM220BPB1ANY3 271 aa11.18□□□□□ -0.62
VCL-205ENST00000478896 FXYD1O00168 92 aa11.18□□□□□ -0.62
VCL-205ENST00000478896 RPL4P36578 427 aaKnown RBP11.18□□□□□ -0.62
VCL-205ENST00000478896 YAP1P46937 504 aaKnown RBP11.18□□□□□ -0.62
VCL-205ENST00000478896 BTG1P62324 171 aa11.18□□□□□ -0.62
VCL-205ENST00000478896 PSG7Q13046 419 aa11.18□□□□□ -0.62
VCL-205ENST00000478896 ZNF154Q13106 437 aa11.18□□□□□ -0.62
VCL-205ENST00000478896 MAPRE2Q15555 327 aa11.18□□□□□ -0.62
VCL-205ENST00000478896 TMEM155Q4W5P6 130 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms