RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 LYPLA1O75608 230 aaPredicted RBP2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 LYPD3O95274 346 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 LALBAP00709 142 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 HSMCR30P0CW71 290 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 GZMAP12544 262 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 RNH1P13489 461 aaKnown RBP2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 HLA-EP13747 358 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 POU2F1P14859 743 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 FGF9P31371 208 aaPredicted RBP2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 DRD3P35462 400 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 KLK7P49862 253 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 DAP3P51398 398 aaKnown RBP2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 TPMTP51580 245 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 CHRNB3Q05901 458 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 CUL1Q13616 776 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 CST6Q15828 149 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 DPYSL2Q16555 572 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 MAJINQ3KP22 176 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 HSP90AA4PQ58FG1 418 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 DNAJC24Q6P3W2 148 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 TFAP2EQ6VUC0 442 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 DNM1P46Q6ZS02 220 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 FRA10AC1Q70Z53 315 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 MOB1BQ7L9L4 216 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 PPP1R27Q86WC6 154 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 TRIM69Q86WT6 500 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 PSTKQ8IV42 348 aaKnown RBP2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 CCDC50Q8IVM0 306 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 UBQLNLQ8IYU4 475 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 KRT222Q8N1A0 295 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 MTURNQ8N3F0 131 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 CD177Q8N6Q3 437 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 BHLHE23Q8NDY6 225 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 ISG20Q96AZ6 181 aaKnown RBP2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 EFHD2Q96C19 240 aaPredicted RBP2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 IL4I1Q96RQ9 567 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 CCNL2Q96S94 520 aaPredicted RBP2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 C11orf70Q9BRQ4 267 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 CNPY3Q9BT09 278 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 CAPS2Q9BXY5 557 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 Q9H3A6 140 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 ZDHHC4Q9NPG8 344 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 TNFRSF19Q9NS68 423 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 ADAM22Q9P0K1 906 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 DCDC2Q9UHG0 476 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 LCMT1Q9UIC8 334 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 PHF11Q9UIL8 331 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 VANGL2Q9ULK5 521 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 CLEC4AQ9UMR7 237 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 TIMM10BQ9Y5J6 103 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 BZW2Q9Y6E2 419 aaKnown RBP2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 USP24Q9UPU5 2620 aa2.91□□□□□ -1.94
CDC42BPA-212ENST00000478573 NCOR2Q9Y618 2525 aa2.9□□□□□ -1.94
CDC42BPA-212ENST00000478573 FAM208BQ5VWN6 2430 aa2.9□□□□□ -1.94
CDC42BPA-212ENST00000478573 MDC1Q14676 2089 aaKnown RBP2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 HEATR5BQ9P2D3 2071 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 TSPAN11A1L157 253 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 PCP4L1A6NKN8 68 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 GOLGA6L19H0YKK7 550 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 GOLGA8SH3BPF8 625 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 ZMPSTE24O75844 475 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 IL1BP01584 269 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 IGHV4-34P06331 123 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 VDAC1P21796 283 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 PCMT1P22061 227 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 HNRNPH3P31942 346 aaKnown RBP2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 PCK1P35558 622 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 LEPP41159 167 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 PTGDSP41222 190 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 PSMD8P48556 350 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 CCT3P49368 545 aaKnown RBP2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 P2RY4P51582 365 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 TPI1P60174 286 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 GNA12Q03113 381 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 FGL1Q08830 312 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 EGFEM1PQ0D2K5 195 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 SLC10A7Q0GE19 358 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 KLRB1Q12918 225 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 PARP15Q460N3 678 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 CCDC14Q49A88 953 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 PRR30Q53SZ7 412 aaPredicted RBP2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 C9orf64Q5T6V5 341 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 OR4F3Q6IEY1 312 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 CCDC137Q6PK04 289 aaKnown RBP2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 KRTAP5-5Q701N2 237 aaPredicted RBP2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 EFL1Q7Z2Z2 1120 aaKnown RBP2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 LCA5Q86VQ0 697 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 KRTAP11-1Q8IUC1 163 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 OR2L13Q8N349 312 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 MFSD9Q8NBP5 474 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 OR52K2Q8NGK3 314 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 JOSD2Q8TAC2 188 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 PAQR8Q8TEZ7 354 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 FAM172AQ8WUF8 416 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 RXFP2Q8WXD0 754 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 TCEAL3Q969E4 200 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 SLC25A38Q96DW6 304 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 MCEEQ96PE7 176 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 ZNF184Q99676 751 aaPredicted RBP2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 NPAS2Q99743 824 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms