RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 ZNF254O75437 659 aa12.91□□□□□ -0.34
NPHP4-208ENST00000478423 CBX7O95931 251 aa12.91□□□□□ -0.34
NPHP4-208ENST00000478423 TGM4P49221 684 aa12.91□□□□□ -0.34
NPHP4-208ENST00000478423 RRAS2P62070 204 aaPredicted RBP12.91□□□□□ -0.34
NPHP4-208ENST00000478423 KCNJ8Q15842 424 aa12.91□□□□□ -0.34
NPHP4-208ENST00000478423 KTI12Q96EK9 354 aaPredicted RBP12.91□□□□□ -0.34
NPHP4-208ENST00000478423 ZC3H10Q96K80 434 aaKnown RBP12.91□□□□□ -0.34
NPHP4-208ENST00000478423 RGPD4Q7Z3J3 1758 aa12.91□□□□□ -0.34
NPHP4-208ENST00000478423 PCP4L1A6NKN8 68 aa12.91□□□□□ -0.34
NPHP4-208ENST00000478423 MCRIP1C9JLW8 97 aa12.91□□□□□ -0.34
NPHP4-208ENST00000478423 M0QYG6 137 aa12.91□□□□□ -0.34
NPHP4-208ENST00000478423 GUSBP08236 651 aa12.91□□□□□ -0.34
NPHP4-208ENST00000478423 ZNF546Q86UE3 836 aa12.91□□□□□ -0.34
NPHP4-208ENST00000478423 OR51E1Q8TCB6 317 aa12.91□□□□□ -0.34
NPHP4-208ENST00000478423 C3orf49Q96BT1 292 aa12.91□□□□□ -0.34
NPHP4-208ENST00000478423 DUSP13Q9UII6 198 aa12.91□□□□□ -0.34
NPHP4-208ENST00000478423 LHX6Q9UPM6 363 aa12.91□□□□□ -0.34
NPHP4-208ENST00000478423 CCR9P51686 369 aa12.9□□□□□ -0.34
NPHP4-208ENST00000478423 THEM4Q5T1C6 240 aa12.9□□□□□ -0.34
NPHP4-208ENST00000478423 ZNF585AQ6P3V2 769 aa12.9□□□□□ -0.34
NPHP4-208ENST00000478423 UBE3DQ7Z6J8 389 aa12.9□□□□□ -0.34
NPHP4-208ENST00000478423 RAB22AQ9UL26 194 aa12.9□□□□□ -0.34
NPHP4-208ENST00000478423 A0A1W2PPV9 198 aa12.9□□□□□ -0.34
NPHP4-208ENST00000478423 TNFSF4P23510 183 aa12.9□□□□□ -0.34
NPHP4-208ENST00000478423 EPHA8P29322 1005 aaPredicted RBP12.9□□□□□ -0.34
NPHP4-208ENST00000478423 BDH1Q02338 343 aa12.9□□□□□ -0.34
NPHP4-208ENST00000478423 OR1S1Q8NH92 325 aa12.9□□□□□ -0.34
NPHP4-208ENST00000478423 ABHD5Q8WTS1 349 aa12.9□□□□□ -0.34
NPHP4-208ENST00000478423 SEC22AQ96IW7 307 aa12.9□□□□□ -0.34
NPHP4-208ENST00000478423 IP6K3Q96PC2 410 aa12.9□□□□□ -0.34
NPHP4-208ENST00000478423 TAS2R4Q9NYW5 299 aa12.9□□□□□ -0.34
NPHP4-208ENST00000478423 PIGLQ9Y2B2 252 aa12.9□□□□□ -0.34
NPHP4-208ENST00000478423 PARP14Q460N5 1801 aa12.9□□□□□ -0.34
NPHP4-208ENST00000478423 TRIM64CA6NLI5 447 aa12.9□□□□□ -0.34
NPHP4-208ENST00000478423 CD53P19397 219 aa12.9□□□□□ -0.34
NPHP4-208ENST00000478423 MPLP40238 635 aa12.9□□□□□ -0.34
NPHP4-208ENST00000478423 CAMLGP49069 296 aa12.9□□□□□ -0.34
NPHP4-208ENST00000478423 SRSF5Q13243 272 aaKnown RBP12.9□□□□□ -0.34
NPHP4-208ENST00000478423 FCN2Q15485 313 aa12.9□□□□□ -0.34
NPHP4-208ENST00000478423 CTF1Q16619 201 aa12.9□□□□□ -0.34
NPHP4-208ENST00000478423 ORAI1Q96D31 301 aa12.9□□□□□ -0.34
NPHP4-208ENST00000478423 DEFB127Q9H1M4 99 aa12.9□□□□□ -0.34
NPHP4-208ENST00000478423 SLA2Q9H6Q3 261 aa12.9□□□□□ -0.34
NPHP4-208ENST00000478423 B3GNT2Q9NY97 397 aa12.9□□□□□ -0.34
NPHP4-208ENST00000478423 CACNA1GO43497 2377 aa12.9□□□□□ -0.34
NPHP4-208ENST00000478423 HYAL3O43820 417 aaPredicted RBP12.9□□□□□ -0.35
NPHP4-208ENST00000478423 STK17BO94768 372 aa12.9□□□□□ -0.35
NPHP4-208ENST00000478423 SOD1P00441 154 aa12.9□□□□□ -0.35
NPHP4-208ENST00000478423 TBXA2RP21731 343 aa12.9□□□□□ -0.35
NPHP4-208ENST00000478423 LAP3P28838 519 aa12.9□□□□□ -0.35
NPHP4-208ENST00000478423 PTGS2P35354 604 aa12.9□□□□□ -0.35
NPHP4-208ENST00000478423 SRP9P49458 86 aaKnown RBP12.9□□□□□ -0.35
NPHP4-208ENST00000478423 OR10A3P58181 314 aa12.9□□□□□ -0.35
NPHP4-208ENST00000478423 PMPCAQ10713 525 aa12.9□□□□□ -0.35
NPHP4-208ENST00000478423 RBM39Q14498 530 aaKnown RBP12.9□□□□□ -0.35
NPHP4-208ENST00000478423 ZNF74Q16587 644 aa12.9□□□□□ -0.35
NPHP4-208ENST00000478423 C16orf47Q6ZP98 133 aaPredicted RBP12.9□□□□□ -0.35
NPHP4-208ENST00000478423 ZFAND1Q8TCF1 268 aa12.9□□□□□ -0.35
NPHP4-208ENST00000478423 SPACA5Q96QH8 159 aa12.9□□□□□ -0.35
NPHP4-208ENST00000478423 S1PR5Q9H228 398 aa12.9□□□□□ -0.35
NPHP4-208ENST00000478423 SLCO5A1Q9H2Y9 848 aa12.9□□□□□ -0.35
NPHP4-208ENST00000478423 BANF2Q9H503 90 aa12.9□□□□□ -0.35
NPHP4-208ENST00000478423 MMP25Q9NPA2 562 aa12.9□□□□□ -0.35
NPHP4-208ENST00000478423 STMND1H3BQB6 276 aa12.89□□□□□ -0.35
NPHP4-208ENST00000478423 SULT1B1O43704 296 aa12.89□□□□□ -0.35
NPHP4-208ENST00000478423 MRM1Q6IN84 353 aaKnown RBP12.89□□□□□ -0.35
NPHP4-208ENST00000478423 SLC35B4Q969S0 331 aa12.89□□□□□ -0.35
NPHP4-208ENST00000478423 KLF13Q9Y2Y9 288 aaPredicted RBP12.89□□□□□ -0.35
NPHP4-208ENST00000478423 PCDHGA5Q9Y5G8 931 aa12.89□□□□□ -0.35
NPHP4-208ENST00000478423 NPIPB8E9PQR5 432 aa12.89□□□□□ -0.35
NPHP4-208ENST00000478423 SULT1C4O75897 302 aa12.89□□□□□ -0.35
NPHP4-208ENST00000478423 BCKDHBP21953 392 aa12.89□□□□□ -0.35
NPHP4-208ENST00000478423 RPS18P62269 152 aaKnown RBP12.89□□□□□ -0.35
NPHP4-208ENST00000478423 RBPJQ06330 500 aa12.89□□□□□ -0.35
NPHP4-208ENST00000478423 BEX5Q5H9J7 111 aa12.89□□□□□ -0.35
NPHP4-208ENST00000478423 OR2G2Q8NGZ5 317 aa12.89□□□□□ -0.35
NPHP4-208ENST00000478423 STK35Q8TDR2 534 aa12.89□□□□□ -0.35
NPHP4-208ENST00000478423 B9D1Q9UPM9 204 aa12.89□□□□□ -0.35
NPHP4-208ENST00000478423 IGHV3-15A0A0B4J1V0 119 aa12.89□□□□□ -0.35
NPHP4-208ENST00000478423 SORDQ00796 357 aa12.89□□□□□ -0.35
NPHP4-208ENST00000478423 MZT1Q08AG7 82 aa12.89□□□□□ -0.35
NPHP4-208ENST00000478423 GPR157Q5UAW9 335 aa12.89□□□□□ -0.35
NPHP4-208ENST00000478423 CBLN3Q6UW01 205 aa12.89□□□□□ -0.35
NPHP4-208ENST00000478423 GCDHQ92947 438 aaPredicted RBP12.89□□□□□ -0.35
NPHP4-208ENST00000478423 OXGR1Q96P68 337 aa12.89□□□□□ -0.35
NPHP4-208ENST00000478423 CCDC88CQ9P219 2028 aa12.89□□□□□ -0.35
NPHP4-208ENST00000478423 M0R135 149 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 FABP7O15540 132 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 PRSS23O95084 383 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 CHRM2P08172 466 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 NAGAP17050 411 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 SLC10A1Q14973 349 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 ACTBL2Q562R1 376 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 XAF1Q6GPH4 301 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 DOK3Q7L591 496 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 LILRB2Q8N423 598 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 OR52I2Q8NH67 350 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 ZNF799Q96GE5 643 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 DNAJB12Q9NXW2 375 aaKnown RBP12.88□□□□□ -0.35
NPHP4-208ENST00000478423 SHISA8B8ZZ34 492 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms