RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 NABP1Q96AH0 204 aa25.45■■□□□ 1.66
VEGFA-211ENST00000476772 TM9SF2Q99805 663 aa25.45■■□□□ 1.66
VEGFA-211ENST00000476772 CENPOQ9BU64 300 aa25.45■■□□□ 1.66
VEGFA-211ENST00000476772 NELFAQ9H3P2 528 aa25.45■■□□□ 1.66
VEGFA-211ENST00000476772 LHFPL6Q9Y693 200 aa25.45■■□□□ 1.66
VEGFA-211ENST00000476772 BOD1L1Q8NFC6 3051 aa25.45■■□□□ 1.66
VEGFA-211ENST00000476772 IGHV3-9P01782 118 aa25.44■■□□□ 1.66
VEGFA-211ENST00000476772 TACSTD2P09758 323 aa25.44■■□□□ 1.66
VEGFA-211ENST00000476772 AGTR1P30556 359 aa25.44■■□□□ 1.66
VEGFA-211ENST00000476772 GUCA1AP43080 201 aaPredicted RBP25.44■■□□□ 1.66
VEGFA-211ENST00000476772 SIRPAP78324 504 aa25.44■■□□□ 1.66
VEGFA-211ENST00000476772 GPR50Q13585 617 aa25.44■■□□□ 1.66
VEGFA-211ENST00000476772 LIPNQ5VXI9 398 aa25.44■■□□□ 1.66
VEGFA-211ENST00000476772 TRMT61AQ96FX7 289 aaKnown RBP25.44■■□□□ 1.66
VEGFA-211ENST00000476772 DCUN1D5Q9BTE7 237 aa25.44■■□□□ 1.66
VEGFA-211ENST00000476772 TMED9Q9BVK6 235 aa25.44■■□□□ 1.66
VEGFA-211ENST00000476772 RNF167Q9H6Y7 350 aa25.44■■□□□ 1.66
VEGFA-211ENST00000476772 EXOSC4Q9NPD3 245 aaKnown RBP25.44■■□□□ 1.66
VEGFA-211ENST00000476772 ATMQ13315 3056 aa25.43■■□□□ 1.66
VEGFA-211ENST00000476772 SLC22A1O15245 554 aa25.43■■□□□ 1.66
VEGFA-211ENST00000476772 PLPP2O43688 288 aa25.43■■□□□ 1.66
VEGFA-211ENST00000476772 RPP14O95059 124 aaKnown RBP25.43■■□□□ 1.66
VEGFA-211ENST00000476772 MSR1P21757 451 aa25.43■■□□□ 1.66
VEGFA-211ENST00000476772 HOXD11P31277 338 aaPredicted RBP25.43■■□□□ 1.66
VEGFA-211ENST00000476772 ROM1Q03395 351 aa25.43■■□□□ 1.66
VEGFA-211ENST00000476772 NFATC3Q12968 1075 aa25.43■■□□□ 1.66
VEGFA-211ENST00000476772 CDK5R1Q15078 307 aa25.43■■□□□ 1.66
VEGFA-211ENST00000476772 DMKNQ6E0U4 476 aaPredicted RBP25.43■■□□□ 1.66
VEGFA-211ENST00000476772 KCTD18Q6PI47 426 aaPredicted RBP25.43■■□□□ 1.66
VEGFA-211ENST00000476772 EGFL6Q8IUX8 553 aa25.43■■□□□ 1.66
VEGFA-211ENST00000476772 ZNF679Q8IYX0 411 aa25.43■■□□□ 1.66
VEGFA-211ENST00000476772 CISD2Q8N5K1 135 aaKnown RBP25.43■■□□□ 1.66
VEGFA-211ENST00000476772 NDNFQ8TB73 568 aa25.43■■□□□ 1.66
VEGFA-211ENST00000476772 CPT1CQ8TCG5 803 aa25.43■■□□□ 1.66
VEGFA-211ENST00000476772 RNF166Q96A37 237 aaPredicted RBP25.43■■□□□ 1.66
VEGFA-211ENST00000476772 LINC00470Q9BZP3 86 aa25.43■■□□□ 1.66
VEGFA-211ENST00000476772 GPR35Q9HC97 309 aa25.43■■□□□ 1.66
VEGFA-211ENST00000476772 GP6Q9HCN6 339 aa25.43■■□□□ 1.66
VEGFA-211ENST00000476772 SLC7A10Q9NS82 523 aa25.43■■□□□ 1.66
VEGFA-211ENST00000476772 OGG1O15527 345 aa25.42■■□□□ 1.66
VEGFA-211ENST00000476772 SLC3A1Q07837 685 aa25.42■■□□□ 1.66
VEGFA-211ENST00000476772 ACSF3Q4G176 576 aaPredicted RBP25.42■■□□□ 1.66
VEGFA-211ENST00000476772 KRTCAP3Q53RY4 240 aa25.42■■□□□ 1.66
VEGFA-211ENST00000476772 ZNF585AQ6P3V2 769 aa25.42■■□□□ 1.66
VEGFA-211ENST00000476772 KRT77Q7Z794 578 aa25.42■■□□□ 1.66
VEGFA-211ENST00000476772 MAP6Q96JE9 813 aa25.42■■□□□ 1.66
VEGFA-211ENST00000476772 ELOVL3Q9HB03 270 aa25.42■■□□□ 1.66
VEGFA-211ENST00000476772 PTTG2Q9NZH5 202 aa25.42■■□□□ 1.66
VEGFA-211ENST00000476772 AHRRA9YTQ3 701 aa25.42■■□□□ 1.66
VEGFA-211ENST00000476772 KRT33AO76009 404 aa25.42■■□□□ 1.66
VEGFA-211ENST00000476772 LSM6P62312 80 aaKnown RBP25.42■■□□□ 1.66
VEGFA-211ENST00000476772 ROR2Q01974 943 aaKnown RBP25.42■■□□□ 1.66
VEGFA-211ENST00000476772 CEACAM16Q2WEN9 425 aa25.42■■□□□ 1.66
VEGFA-211ENST00000476772 CCDC58Q4VC31 144 aa25.42■■□□□ 1.66
VEGFA-211ENST00000476772 RPL22L1Q6P5R6 122 aaKnown RBP25.42■■□□□ 1.66
VEGFA-211ENST00000476772 HSD17B8Q92506 261 aa25.42■■□□□ 1.66
VEGFA-211ENST00000476772 APH1AQ96BI3 265 aa25.42■■□□□ 1.66
VEGFA-211ENST00000476772 GMPPAQ96IJ6 420 aaPredicted RBP25.42■■□□□ 1.66
VEGFA-211ENST00000476772 ZNF416Q9BWM5 594 aa25.42■■□□□ 1.66
VEGFA-211ENST00000476772 MROQ9BYG7 248 aa25.42■■□□□ 1.66
VEGFA-211ENST00000476772 ASH2LQ9UBL3 628 aa25.42■■□□□ 1.66
VEGFA-211ENST00000476772 GDF2Q9UK05 429 aaPredicted RBP25.42■■□□□ 1.66
VEGFA-211ENST00000476772 TGM4P49221 684 aa25.41■■□□□ 1.66
VEGFA-211ENST00000476772 MRPS34P82930 218 aaKnown RBP25.41■■□□□ 1.66
VEGFA-211ENST00000476772 CFAP77Q6ZQR2 320 aa25.41■■□□□ 1.66
VEGFA-211ENST00000476772 OR2AJ1Q8NGZ0 328 aa25.41■■□□□ 1.66
VEGFA-211ENST00000476772 PGLYRP3Q96LB9 341 aa25.41■■□□□ 1.66
VEGFA-211ENST00000476772 C1orf198Q9H425 327 aa25.41■■□□□ 1.66
VEGFA-211ENST00000476772 SSR3Q9UNL2 185 aa25.41■■□□□ 1.66
VEGFA-211ENST00000476772 MED12LQ86YW9 2145 aa25.4■■□□□ 1.66
VEGFA-211ENST00000476772 TMEM8BA6NDV4 472 aa25.4■■□□□ 1.66
VEGFA-211ENST00000476772 SS18L1O75177 396 aaPredicted RBP25.4■■□□□ 1.66
VEGFA-211ENST00000476772 NANOS3P60323 173 aaKnown RBP25.4■■□□□ 1.66
VEGFA-211ENST00000476772 FABP5Q01469 135 aa25.4■■□□□ 1.66
VEGFA-211ENST00000476772 ENDOGQ14249 297 aaKnown RBP25.4■■□□□ 1.66
VEGFA-211ENST00000476772 OR7E24Q6IFN5 339 aa25.4■■□□□ 1.66
VEGFA-211ENST00000476772 SMIM19Q96E16 107 aa25.4■■□□□ 1.66
VEGFA-211ENST00000476772 PRORYQ9H606 182 aa25.4■■□□□ 1.66
VEGFA-211ENST00000476772 C12orf49Q9H741 205 aa25.4■■□□□ 1.66
VEGFA-211ENST00000476772 GLRX2Q9NS18 164 aa25.4■■□□□ 1.66
VEGFA-211ENST00000476772 TMEM38BQ9NVV0 291 aa25.4■■□□□ 1.66
VEGFA-211ENST00000476772 LRP12Q9Y561 859 aa25.4■■□□□ 1.66
VEGFA-211ENST00000476772 CHD8Q9HCK8 2581 aa25.4■■□□□ 1.66
VEGFA-211ENST00000476772 CACNA1CQ13936 2221 aa25.4■■□□□ 1.66
VEGFA-211ENST00000476772 TRBV2A0A0J9YWF9 115 aa25.39■■□□□ 1.66
VEGFA-211ENST00000476772 OR6C65A6NJZ3 312 aa25.39■■□□□ 1.66
VEGFA-211ENST00000476772 HSPB2A8KAH6 182 aa25.39■■□□□ 1.66
VEGFA-211ENST00000476772 GDI2P50395 445 aaKnown RBP25.39■■□□□ 1.66
VEGFA-211ENST00000476772 TDGF1P3P51864 188 aa25.39■■□□□ 1.66
VEGFA-211ENST00000476772 HSPB2Q16082 182 aa25.39■■□□□ 1.66
VEGFA-211ENST00000476772 GDPGP1Q6ZNW5 385 aa25.39■■□□□ 1.66
VEGFA-211ENST00000476772 ZNF100Q8IYN0 542 aa25.39■■□□□ 1.66
VEGFA-211ENST00000476772 LRRC18Q8N456 261 aa25.39■■□□□ 1.66
VEGFA-211ENST00000476772 OR10S1Q8NGN2 331 aa25.39■■□□□ 1.66
VEGFA-211ENST00000476772 RNF133Q8WVZ7 376 aa25.39■■□□□ 1.66
VEGFA-211ENST00000476772 SLAMF6Q96DU3 332 aa25.39■■□□□ 1.66
VEGFA-211ENST00000476772 DCLRE1CQ96SD1 692 aaKnown RBP25.39■■□□□ 1.66
VEGFA-211ENST00000476772 ZNF182P17025 639 aaPredicted RBP25.39■■□□□ 1.65
VEGFA-211ENST00000476772 MRPL28Q13084 256 aaKnown RBP25.39■■□□□ 1.65
VEGFA-211ENST00000476772 CD200R1LQ6Q8B3 271 aa25.39■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms