RNA–Protein interactions for RNA: ENST00000475722.5

PRUNE1-210, Transcript of prune exopolyphosphatase 1, humanhuman

TSL 3

Gene PRUNE1, Length 916 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-210ENST00000475722 SPARCP09486 303 aa13.11□□□□□ -0.31
PRUNE1-210ENST00000475722 HOXB1P14653 301 aaPredicted RBP13.11□□□□□ -0.31
PRUNE1-210ENST00000475722 CRHBPP24387 322 aa13.11□□□□□ -0.31
PRUNE1-210ENST00000475722 CCKARP32238 428 aa13.11□□□□□ -0.31
PRUNE1-210ENST00000475722 UGT2B10P36537 528 aa13.11□□□□□ -0.31
PRUNE1-210ENST00000475722 HCCSP53701 268 aa13.11□□□□□ -0.31
PRUNE1-210ENST00000475722 SLC16A14Q7RTX9 510 aa13.11□□□□□ -0.31
PRUNE1-210ENST00000475722 DPY19L4Q7Z388 723 aa13.11□□□□□ -0.31
PRUNE1-210ENST00000475722 CDC20BQ86Y33 519 aa13.11□□□□□ -0.31
PRUNE1-210ENST00000475722 SLC35F2Q8IXU6 374 aa13.11□□□□□ -0.31
PRUNE1-210ENST00000475722 CCDC36Q8IYA8 594 aa13.11□□□□□ -0.31
PRUNE1-210ENST00000475722 C17orf78Q8N4C9 275 aa13.11□□□□□ -0.31
PRUNE1-210ENST00000475722 WDR31Q8NA23 367 aa13.11□□□□□ -0.31
PRUNE1-210ENST00000475722 ZNF540Q8NDQ6 660 aa13.11□□□□□ -0.31
PRUNE1-210ENST00000475722 STEAP2Q8NFT2 490 aa13.11□□□□□ -0.31
PRUNE1-210ENST00000475722 OR52I1Q8NGK6 324 aa13.11□□□□□ -0.31
PRUNE1-210ENST00000475722 FGFBP3Q8TAT2 258 aa13.11□□□□□ -0.31
PRUNE1-210ENST00000475722 RNASE6Q93091 150 aaKnown RBP13.11□□□□□ -0.31
PRUNE1-210ENST00000475722 LRRC46Q96FV0 321 aa13.11□□□□□ -0.31
PRUNE1-210ENST00000475722 YTHDF1Q9BYJ9 559 aaKnown RBP13.11□□□□□ -0.31
PRUNE1-210ENST00000475722 KCNN2Q9H2S1 579 aa13.11□□□□□ -0.31
PRUNE1-210ENST00000475722 FGF20Q9NP95 211 aaPredicted RBP13.11□□□□□ -0.31
PRUNE1-210ENST00000475722 SLC17A5Q9NRA2 495 aa13.11□□□□□ -0.31
PRUNE1-210ENST00000475722 CNOT2Q9NZN8 540 aaKnown RBP13.11□□□□□ -0.31
PRUNE1-210ENST00000475722 CYB5R1Q9UHQ9 305 aa13.11□□□□□ -0.31
PRUNE1-210ENST00000475722 POLR1DQ9Y2S0 133 aa13.11□□□□□ -0.31
PRUNE1-210ENST00000475722 TPRKBQ9Y3C4 175 aa13.11□□□□□ -0.31
PRUNE1-210ENST00000475722 LHFPL6Q9Y693 200 aa13.11□□□□□ -0.31
PRUNE1-210ENST00000475722 FLNCQ14315 2725 aa13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 IRGMA1A4Y4 181 aa13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 ZNF503-AS2A6NEH8 195 aa13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 WIPF3A6NGB9 483 aa13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 OR5H1A6NKK0 313 aa13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 PTGES3LE9PB15 166 aa13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 TMCC2O75069 709 aa13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 FADS2O95864 444 aaKnown RBP13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 HLA-HP01893 362 aa13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 PATE4P0C8F1 98 aa13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 PIPP12273 146 aaPredicted RBP13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 CAPZA2P47755 286 aa13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 PCBD1P61457 104 aa13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 SLC35A2P78381 396 aa13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 TFF3Q07654 80 aa13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 SRSF1Q07955 248 aaKnown RBP eCLIP13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 AQP6Q13520 282 aa13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 SLC36A2Q495M3 483 aa13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 SLC18B1Q6NT16 456 aa13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 CORO6Q6QEF8 472 aa13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 AHSA2Q719I0 299 aa13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 SYT9Q86SS6 491 aa13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 LINC00346Q8IVM7 164 aa13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 OR2AJ1Q8NGZ0 328 aa13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 OTOSQ8NHW6 89 aa13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 IPCEF1Q8WWN9 437 aaPredicted RBP13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 S100PBPQ96BU1 408 aa13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 WACQ9BTA9 647 aa13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 ACTR6Q9GZN1 396 aa13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 OR10A4Q9H209 315 aa13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 DUSP21Q9H596 190 aa13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 PAK1IP1Q9NWT1 392 aaPredicted RBP13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 B3GNT2Q9NY97 397 aa13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 ASH2LQ9UBL3 628 aa13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 GDF2Q9UK05 429 aaPredicted RBP13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 BLOC1S6Q9UL45 172 aa13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 MYRFQ9Y2G1 1151 aa13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 PCDHGB1Q9Y5G3 927 aa13.1□□□□□ -0.31
PRUNE1-210ENST00000475722 ARPC4-TTLL3A0A0A6YYG9 625 aa13.09□□□□□ -0.31
PRUNE1-210ENST00000475722 AGFG2O95081 481 aa13.09□□□□□ -0.31
PRUNE1-210ENST00000475722 ADRA2AP08913 450 aa13.09□□□□□ -0.31
PRUNE1-210ENST00000475722 MMP7P09237 267 aaPredicted RBP13.09□□□□□ -0.31
PRUNE1-210ENST00000475722 OR2T7P0C7T2 308 aa13.09□□□□□ -0.31
PRUNE1-210ENST00000475722 CD79AP11912 226 aa13.09□□□□□ -0.31
PRUNE1-210ENST00000475722 ZNF32P17041 273 aa13.09□□□□□ -0.31
PRUNE1-210ENST00000475722 ALOX5APP20292 161 aa13.09□□□□□ -0.31
PRUNE1-210ENST00000475722 HOXC12P31275 282 aa13.09□□□□□ -0.31
PRUNE1-210ENST00000475722 CHN2P52757 468 aa13.09□□□□□ -0.31
PRUNE1-210ENST00000475722 UBE2NP61088 152 aaKnown RBP13.09□□□□□ -0.31
PRUNE1-210ENST00000475722 TUBA1BP68363 451 aa13.09□□□□□ -0.31
PRUNE1-210ENST00000475722 TUBA4AP68366 448 aa13.09□□□□□ -0.31
PRUNE1-210ENST00000475722 HIST1H3AP68431 136 aa13.09□□□□□ -0.31
PRUNE1-210ENST00000475722 PIGFQ07326 219 aa13.09□□□□□ -0.31
PRUNE1-210ENST00000475722 ST3GAL4Q11206 333 aa13.09□□□□□ -0.31
PRUNE1-210ENST00000475722 TIMM23BQ5SRD1 257 aa13.09□□□□□ -0.31
PRUNE1-210ENST00000475722 HIST2H3PS2Q5TEC6 136 aa13.09□□□□□ -0.31
PRUNE1-210ENST00000475722 HIST2H3AQ71DI3 136 aa13.09□□□□□ -0.31
PRUNE1-210ENST00000475722 TUBA1AQ71U36 451 aa13.09□□□□□ -0.31
PRUNE1-210ENST00000475722 DCXRQ7Z4W1 244 aa13.09□□□□□ -0.31
PRUNE1-210ENST00000475722 DPPA2Q7Z7J5 298 aa13.09□□□□□ -0.31
PRUNE1-210ENST00000475722 P2RY8Q86VZ1 359 aa13.09□□□□□ -0.31
PRUNE1-210ENST00000475722 ZNF454Q8N9F8 522 aa13.09□□□□□ -0.31
PRUNE1-210ENST00000475722 OR10H4Q8NGA5 316 aa13.09□□□□□ -0.31
PRUNE1-210ENST00000475722 OR2T27Q8NH04 317 aa13.09□□□□□ -0.31
PRUNE1-210ENST00000475722 NANOS1Q8WY41 292 aaKnown RBP13.09□□□□□ -0.31
PRUNE1-210ENST00000475722 SGCDQ92629 289 aa13.09□□□□□ -0.31
PRUNE1-210ENST00000475722 TMEM80Q96HE8 168 aa13.09□□□□□ -0.31
PRUNE1-210ENST00000475722 MNTQ99583 582 aa13.09□□□□□ -0.31
PRUNE1-210ENST00000475722 TBX5Q99593 518 aa13.09□□□□□ -0.31
PRUNE1-210ENST00000475722 USB1Q9BQ65 265 aaKnown RBP13.09□□□□□ -0.31
PRUNE1-210ENST00000475722 COPS4Q9BT78 406 aa13.09□□□□□ -0.31
PRUNE1-210ENST00000475722 CCNB1IP1Q9NPC3 277 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms