RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 KDM8Q8N371 416 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 GPR137CQ8N3F9 429 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 MS4A15Q8N5U1 240 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 CYB561A3Q8NBI2 242 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 OR51G2Q8NGK0 314 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 OR6K6Q8NGW6 343 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 OR2AJ1Q8NGZ0 328 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 RAB2BQ8WUD1 216 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 MCHR2Q969V1 340 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 MUL1Q969V5 352 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 RASD2Q96D21 266 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 GPR137Q96N19 417 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 INTS14Q96SY0 518 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 NPAS1Q99742 590 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 TTYH2Q9BSA4 534 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 HES7Q9BYE0 225 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 MROQ9BYG7 248 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 NUAK2Q9H093 628 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 MOV10Q9HCE1 1003 aaKnown RBP6.22□□□□□ -1.41
SHQ1-207ENST00000475558 TRIM36Q9NQ86 728 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 ERVK13-1Q9NX77 482 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 LAMP5Q9UJQ1 280 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 CAMK2AQ9UQM7 478 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 GSTK1Q9Y2Q3 226 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 NOSIPQ9Y314 301 aaKnown RBP6.22□□□□□ -1.41
SHQ1-207ENST00000475558 SPG11Q96JI7 2443 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 NCOA6Q14686 2063 aaPredicted RBP6.22□□□□□ -1.41
SHQ1-207ENST00000475558 GTF3C1Q12789 2109 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 CCDC182A6NF36 153 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 METTL15A6NJ78 407 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 SLC22A20A6NK97 555 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 C12orf71A8MTZ7 269 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 PRRG2O14669 202 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 SMAD9O15198 467 aaKnown RBP6.21□□□□□ -1.42
SHQ1-207ENST00000475558 DHHO43323 396 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 SLC19A2O60779 497 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 TMEM127O75204 238 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 SERPINI2O75830 405 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 FARS2O95363 451 aaKnown RBP6.21□□□□□ -1.42
SHQ1-207ENST00000475558 CLDN14O95500 239 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 OPN1LWP04000 364 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 HLA-DPB1P04440 258 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 KRT8P05787 483 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 QDPRP09417 244 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 PGA4P0DJD7 388 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 PGA3P0DJD8 388 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 GAAP10253 952 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 HLA-DOBP13765 273 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 ALOX5APP20292 161 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 PTNP21246 168 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 TCEA1P23193 301 aaKnown RBP6.21□□□□□ -1.42
SHQ1-207ENST00000475558 SHC1P29353 583 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 TGM4P49221 684 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 RGS6P49758 472 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 ENTPD1P49961 510 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 CDH15P55291 814 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 TGFBR3Q03167 851 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 ROM1Q03395 351 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 ECH1Q13011 328 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 CAMK2DQ13557 499 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 MED22Q15528 200 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 GXYLT1Q4G148 440 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 ARMCX4Q5H9R4 360 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 LINC01590Q5TEZ4 76 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 FAM27BQ5VT28 67 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 NSUN5P2Q63ZY6 315 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 XAF1Q6GPH4 301 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 ABLIM2Q6H8Q1 611 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 TMEM211Q6ICI0 200 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 RPL22L1Q6P5R6 122 aaKnown RBP6.21□□□□□ -1.42
SHQ1-207ENST00000475558 FAM220AQ7Z4H9 259 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 ADGRE4PQ86SQ3 457 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 ANKRD13BQ86YJ7 626 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.21□□□□□ -1.42
SHQ1-207ENST00000475558 SLC35F2Q8IXU6 374 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 TIGD4Q8IY51 512 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 ZIC4Q8N9L1 334 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 CCDC54Q8NEL0 328 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 GJC3Q8NFK1 279 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 OR10H4Q8NGA5 316 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 OR13F1Q8NGS4 319 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 OTOSQ8NHW6 89 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 RNF128Q8TEB7 428 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 UFD1Q92890 307 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 ZNF837Q96EG3 531 aaPredicted RBP6.21□□□□□ -1.42
SHQ1-207ENST00000475558 TXNDC15Q96J42 360 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 SLC6A15Q9H2J7 730 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 C1orf198Q9H425 327 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 ADGRL4Q9HBW9 690 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 UPB1Q9UBR1 384 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 AASSQ9UDR5 926 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 SH3BGRL2Q9UJC5 107 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 COA3Q9Y2R0 106 aaPredicted RBP6.21□□□□□ -1.42
SHQ1-207ENST00000475558 EMC9Q9Y3B6 208 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 FLVCR1Q9Y5Y0 555 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 ABCA2Q9BZC7 2435 aa6.21□□□□□ -1.42
SHQ1-207ENST00000475558 IGLV1-36A0A0B4J1U3 117 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 A0A1W2PQL4 384 aaPredicted RBP6.2□□□□□ -1.42
SHQ1-207ENST00000475558 CCDC160A6NGH7 325 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 SLC22A1O15245 554 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms