RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 TIGD3Q6B0B8 471 aa8.74□□□□□ -1.01
USP39-214ENST00000474572 ZNF704Q6ZNC4 412 aaPredicted RBP8.74□□□□□ -1.01
USP39-214ENST00000474572 FOXL2NBQ6ZUU3 175 aa8.74□□□□□ -1.01
USP39-214ENST00000474572 ESPNLQ6ZVH7 1005 aa8.74□□□□□ -1.01
USP39-214ENST00000474572 ASB18Q6ZVZ8 466 aa8.74□□□□□ -1.01
USP39-214ENST00000474572 RHOUQ7L0Q8 258 aa8.74□□□□□ -1.01
USP39-214ENST00000474572 FCRLAQ7L513 359 aa8.74□□□□□ -1.01
USP39-214ENST00000474572 RAB11FIP2Q7L804 512 aa8.74□□□□□ -1.01
USP39-214ENST00000474572 GLCCI1Q86VQ1 547 aa8.74□□□□□ -1.01
USP39-214ENST00000474572 LYPD6Q86Y78 171 aa8.74□□□□□ -1.01
USP39-214ENST00000474572 OR10S1Q8NGN2 331 aa8.74□□□□□ -1.01
USP39-214ENST00000474572 OR5M1Q8NGP8 315 aa8.74□□□□□ -1.01
USP39-214ENST00000474572 OR1J4Q8NGS1 313 aa8.74□□□□□ -1.01
USP39-214ENST00000474572 C15orf40Q8WUR7 153 aa8.74□□□□□ -1.01
USP39-214ENST00000474572 SGCZQ96LD1 299 aa8.74□□□□□ -1.01
USP39-214ENST00000474572 RBP7Q96R05 134 aa8.74□□□□□ -1.01
USP39-214ENST00000474572 EMC6Q9BV81 110 aa8.74□□□□□ -1.01
USP39-214ENST00000474572 FAM117AQ9C073 453 aa8.74□□□□□ -1.01
USP39-214ENST00000474572 MOV10Q9HCE1 1003 aaKnown RBP8.74□□□□□ -1.01
USP39-214ENST00000474572 SLC17A5Q9NRA2 495 aa8.74□□□□□ -1.01
USP39-214ENST00000474572 HPF1Q9NWY4 346 aa8.74□□□□□ -1.01
USP39-214ENST00000474572 FAM206AQ9NX38 181 aa8.74□□□□□ -1.01
USP39-214ENST00000474572 CYB5R1Q9UHQ9 305 aa8.74□□□□□ -1.01
USP39-214ENST00000474572 ZNF221Q9UK13 617 aa8.74□□□□□ -1.01
USP39-214ENST00000474572 OR52A1Q9UKL2 312 aa8.74□□□□□ -1.01
USP39-214ENST00000474572 FBXL3Q9UKT7 428 aa8.74□□□□□ -1.01
USP39-214ENST00000474572 FARSAQ9Y285 508 aaKnown RBP8.74□□□□□ -1.01
USP39-214ENST00000474572 FREM3P0C091 2139 aa8.74□□□□□ -1.01
USP39-214ENST00000474572 LOC390937A0A1W2PQ73 354 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 OR2M5A3KFT3 312 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 ANXA2P2A6NMY6 339 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 C9orf172C9J069 976 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 INMT-MINDY4F8WBC2 141 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 GABARAPH6UMI1 98 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 SLC17A2O00624 439 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 DNPH1O43598 174 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 ORC5O43913 435 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 RAMP1O60894 148 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 CBR3O75828 277 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 ANXA2P07355 339 aaKnown RBP8.73□□□□□ -1.01
USP39-214ENST00000474572 CD3GP09693 182 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 UBCP0CG48 685 aaKnown RBP8.73□□□□□ -1.01
USP39-214ENST00000474572 NR2C1P13056 603 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 AVPR2P30518 371 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 SRD5A2P31213 254 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 PTH2RP49190 550 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 RAG2P55895 527 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 CLRN1P58418 232 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 B3GALT5-AS1P59052 145 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 KCNJ8Q15842 424 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 TATDN3Q17R31 274 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 TMEM176BQ3YBM2 270 aaPredicted RBP8.73□□□□□ -1.01
USP39-214ENST00000474572 TBRG1Q3YBR2 411 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 ZNF468Q5VIY5 522 aaPredicted RBP8.73□□□□□ -1.01
USP39-214ENST00000474572 TMEM244Q5VVB8 128 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 RSBN1Q5VWQ0 802 aaPredicted RBP8.73□□□□□ -1.01
USP39-214ENST00000474572 TMEM225Q6GV28 225 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 TMPRSS12Q86WS5 348 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 ZNF227Q86WZ6 799 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 NAXDQ8IW45 347 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 UBE2J2Q8N2K1 259 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 TOMM5Q8N4H5 51 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 TMEM156Q8N614 296 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 ZNF433Q8N7K0 673 aaPredicted RBP8.73□□□□□ -1.01
USP39-214ENST00000474572 DTX3Q8N9I9 347 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 OR10H5Q8NGA6 315 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 SYNPRQ8TBG9 265 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 TSEN15Q8WW01 171 aaKnown RBP8.73□□□□□ -1.01
USP39-214ENST00000474572 TMEM54Q969K7 222 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 RELTQ969Z4 430 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 SLAMF6Q96DU3 332 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 TRAF4Q9BUZ4 470 aaPredicted RBP8.73□□□□□ -1.01
USP39-214ENST00000474572 DPAGT1Q9H3H5 408 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 C1orf198Q9H425 327 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 MOB1AQ9H8S9 216 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 HHLA2Q9UM44 414 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 DHDHQ9UQ10 334 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 MRPS18CQ9Y3D5 142 aaKnown RBP8.73□□□□□ -1.01
USP39-214ENST00000474572 RHBDD3Q9Y3P4 386 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 NUBP2Q9Y5Y2 271 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 ALG5Q9Y673 324 aa8.73□□□□□ -1.01
USP39-214ENST00000474572 PHF3Q92576 2039 aaKnown RBP8.73□□□□□ -1.01
USP39-214ENST00000474572 USP34Q70CQ2 3546 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 CCDC187A0A096LP49 1063 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 A0A1W2PNU3 283 aaPredicted RBP8.72□□□□□ -1.01
USP39-214ENST00000474572 PMS2P1A4D2B8 440 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 SULT2B1O00204 365 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 EIF1BO60739 113 aaKnown RBP8.72□□□□□ -1.01
USP39-214ENST00000474572 GLSO94925 669 aaPredicted RBP8.72□□□□□ -1.01
USP39-214ENST00000474572 VAMP5O95183 116 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 MAS1P04201 325 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 SERPINA7P05543 415 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 CD2P06729 351 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 H2BFMP0C1H6 154 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 ARSBP15848 533 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 ZNF43P17038 809 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 TCN2P20062 427 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 KLK2P20151 261 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 SFTPDP35247 375 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 GDNFP39905 211 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms