RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 UNGP13051 313 aaPredicted RBP3.12□□□□□ -1.91
UBR3-208ENST00000474426 BMP5P22003 454 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 SLC6A8P48029 635 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 ACLYP53396 1101 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 ZNF121P58317 390 aaPredicted RBP3.12□□□□□ -1.91
UBR3-208ENST00000474426 OR2B8PP59922 312 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 ERVFC1-1P60608 527 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 RAP2BP61225 183 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 PAX2Q02962 417 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 DLX2Q07687 328 aaPredicted RBP3.12□□□□□ -1.91
UBR3-208ENST00000474426 BAXQ07812 192 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 EIF4HQ15056 248 aaKnown RBP3.12□□□□□ -1.91
UBR3-208ENST00000474426 TMEM128Q5BJH2 165 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 C6orf52Q5T4I8 152 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 BICRALQ6AI39 1079 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 LAIR1Q6GTX8 287 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 CES5AQ6NT32 575 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 CBWD2Q8IUF1 395 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 OR11H4Q8NGC9 324 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 RAB2BQ8WUD1 216 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 TFB1MQ8WVM0 346 aaKnown RBP3.12□□□□□ -1.91
UBR3-208ENST00000474426 SOCS4Q8WXH5 440 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 RORBQ92753 470 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 RAB8BQ92930 207 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 CDKN2AIPNLQ96HQ2 116 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 PYURFQ96I23 114 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 CXorf58Q96LI9 332 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 OR6C1Q96RD1 312 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 NKX3-1Q99801 234 aaPredicted RBP3.12□□□□□ -1.91
UBR3-208ENST00000474426 MICU1Q9BPX6 476 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 ZNF436Q9C0F3 470 aaPredicted RBP3.12□□□□□ -1.91
UBR3-208ENST00000474426 SPRTNQ9H040 489 aaPredicted RBP3.12□□□□□ -1.91
UBR3-208ENST00000474426 MRPL17Q9NRX2 175 aaKnown RBP3.12□□□□□ -1.91
UBR3-208ENST00000474426 ALKBH4Q9NXW9 302 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 NUDT5Q9UKK9 219 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 V9GYY9 64 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 BLMP54132 1417 aaPredicted RBP3.12□□□□□ -1.91
UBR3-208ENST00000474426 TRPM1Q7Z4N2 1603 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 LOC100509620A0A075B734 347 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 A0A096LPE4 126 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 A0A1W2PPZ6 126 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 YJEFN3A6XGL0 299 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 YY2O15391 372 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 PRAF2O60831 178 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 HLA-HP01893 362 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 FABP3P05413 133 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 KLK1P06870 262 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 ADH4P08319 380 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 NR2F6P10588 404 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 CYBAP13498 195 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 HGFP14210 728 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 UGT2B7P16662 529 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 IL7RP16871 459 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 TAC1P20366 129 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 FGF7P21781 194 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 NPBWR1P48145 328 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 DEFA5Q01523 94 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 ACKR1Q16570 336 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 HLA-BQ31612 363 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 CEACAM21Q3KPI0 293 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 PDZD11Q5EBL8 140 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 TMEM268Q5VZI3 342 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 STEAP4Q687X5 459 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 FAM180AQ6UWF9 173 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 CHMP1BQ7LBR1 199 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 PRRT2Q7Z6L0 340 aaPredicted RBP3.11□□□□□ -1.91
UBR3-208ENST00000474426 SLC22A15Q8IZD6 547 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 BEST4Q8NFU0 473 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 SPPL2BQ8TCT7 592 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 ZDHHC16Q969W1 377 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 TADA1Q96BN2 335 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 AURKBQ96GD4 344 aaPredicted RBP3.11□□□□□ -1.91
UBR3-208ENST00000474426 GUCD1Q96NT3 240 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 IL17FQ96PD4 163 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 TKTL2Q9H0I9 626 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 FAM49BQ9NUQ9 324 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 KLRF1Q9NZS2 232 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 CLEC1BQ9P126 229 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 MAGI3Q5TCQ9 1506 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 CEP170Q5SW79 1584 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 NEO1Q92859 1461 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 LRIT2A6NDA9 550 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 MYADML2A6NDP7 307 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 TVP23AA6NH52 213 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 HIDE1A8MVS5 230 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 F2RL2O00254 374 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 IFNW1P05000 195 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 CHRNB4P30926 498 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 HBA1P69905 142 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 IRX4P78413 519 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 PLCXD2Q0VAA5 305 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 ST3GAL4Q11206 333 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 GPR18Q14330 331 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 NPY5RQ15761 445 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 UBE2SQ16763 222 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 EMC4Q5J8M3 183 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 SOHLH1Q5JUK2 328 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 AWAT2Q6E213 333 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 ASTLQ6HA08 431 aaPredicted RBP3.11□□□□□ -1.91
UBR3-208ENST00000474426 PRR27Q6MZM9 219 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms