RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 SOCS2O14508 198 aa15.36■□□□□ 0.05
UPF3A-203ENST00000474056 OR10H3O60404 316 aa15.36■□□□□ 0.05
UPF3A-203ENST00000474056 HPXP02790 462 aa15.36■□□□□ 0.05
UPF3A-203ENST00000474056 GIFP27352 417 aa15.36■□□□□ 0.05
UPF3A-203ENST00000474056 KLF3P57682 345 aaPredicted RBP15.36■□□□□ 0.05
UPF3A-203ENST00000474056 NKPD1Q17RQ9 610 aa15.36■□□□□ 0.05
UPF3A-203ENST00000474056 ELFN2Q5R3F8 820 aa15.36■□□□□ 0.05
UPF3A-203ENST00000474056 OTPQ5XKR4 325 aa15.36■□□□□ 0.05
UPF3A-203ENST00000474056 GPR139Q6DWJ6 353 aa15.36■□□□□ 0.05
UPF3A-203ENST00000474056 SMARCD3Q6STE5 483 aa15.36■□□□□ 0.05
UPF3A-203ENST00000474056 DPY19L2P2Q6ZN68 376 aa15.36■□□□□ 0.05
UPF3A-203ENST00000474056 OR1J1Q8NGS3 322 aa15.36■□□□□ 0.05
UPF3A-203ENST00000474056 SYNPRQ8TBG9 265 aa15.36■□□□□ 0.05
UPF3A-203ENST00000474056 FANK1Q8TC84 345 aa15.36■□□□□ 0.05
UPF3A-203ENST00000474056 C11orf40Q8WZ69 217 aa15.36■□□□□ 0.05
UPF3A-203ENST00000474056 ACTR3BQ9P1U1 418 aa15.36■□□□□ 0.05
UPF3A-203ENST00000474056 TIMM10BQ9Y5J6 103 aa15.36■□□□□ 0.05
UPF3A-203ENST00000474056 KIAA1324LA8MWY0 1029 aaPredicted RBP15.35■□□□□ 0.05
UPF3A-203ENST00000474056 AHCYL1O43865 530 aa15.35■□□□□ 0.05
UPF3A-203ENST00000474056 SLC16A7O60669 478 aa15.35■□□□□ 0.05
UPF3A-203ENST00000474056 NCR1O76036 304 aa15.35■□□□□ 0.05
UPF3A-203ENST00000474056 PPP1R3DO95685 299 aa15.35■□□□□ 0.05
UPF3A-203ENST00000474056 APEHP13798 732 aaKnown RBP15.35■□□□□ 0.05
UPF3A-203ENST00000474056 CDKN2AP42771 156 aaKnown RBP15.35■□□□□ 0.05
UPF3A-203ENST00000474056 GDI2P50395 445 aaKnown RBP15.35■□□□□ 0.05
UPF3A-203ENST00000474056 RPS6KA3P51812 740 aa15.35■□□□□ 0.05
UPF3A-203ENST00000474056 PCBD1P61457 104 aa15.35■□□□□ 0.05
UPF3A-203ENST00000474056 RIN1Q13671 783 aa15.35■□□□□ 0.05
UPF3A-203ENST00000474056 CYB5R2Q6BCY4 276 aa15.35■□□□□ 0.05
UPF3A-203ENST00000474056 RINLQ6ZS11 566 aa15.35■□□□□ 0.05
UPF3A-203ENST00000474056 ALDH16A1Q8IZ83 802 aa15.35■□□□□ 0.05
UPF3A-203ENST00000474056 ZNF540Q8NDQ6 660 aa15.35■□□□□ 0.05
UPF3A-203ENST00000474056 OR52D1Q9H346 318 aa15.35■□□□□ 0.05
UPF3A-203ENST00000474056 RERGLQ9H628 205 aa15.35■□□□□ 0.05
UPF3A-203ENST00000474056 VSX1Q9NZR4 365 aaPredicted RBP15.35■□□□□ 0.05
UPF3A-203ENST00000474056 SVEP1Q4LDE5 3571 aa15.35■□□□□ 0.05
UPF3A-203ENST00000474056 TCRBV5S2A0A599 114 aa15.34■□□□□ 0.05
UPF3A-203ENST00000474056 LRP5LA4QPB2 252 aa15.34■□□□□ 0.05
UPF3A-203ENST00000474056 C12orf71A8MTZ7 269 aa15.34■□□□□ 0.05
UPF3A-203ENST00000474056 LILRA1O75019 489 aa15.34■□□□□ 0.05
UPF3A-203ENST00000474056 TXNDC12O95881 172 aa15.34■□□□□ 0.05
UPF3A-203ENST00000474056 T-ENOLP0DO92 83 aa15.34■□□□□ 0.05
UPF3A-203ENST00000474056 ZNF23P17027 643 aa15.34■□□□□ 0.05
UPF3A-203ENST00000474056 CALB2P22676 271 aa15.34■□□□□ 0.05
UPF3A-203ENST00000474056 COL8A2P25067 703 aa15.34■□□□□ 0.05
UPF3A-203ENST00000474056 FPR3P25089 353 aa15.34■□□□□ 0.05
UPF3A-203ENST00000474056 GZMKP49863 264 aa15.34■□□□□ 0.05
UPF3A-203ENST00000474056 SELENOVP59797 346 aa15.34■□□□□ 0.05
UPF3A-203ENST00000474056 GLO1Q04760 184 aa15.34■□□□□ 0.05
UPF3A-203ENST00000474056 TRIP10Q15642 601 aa15.34■□□□□ 0.05
UPF3A-203ENST00000474056 TMEM255AQ5JRV8 349 aa15.34■□□□□ 0.05
UPF3A-203ENST00000474056 SPATA46Q5T0L3 261 aa15.34■□□□□ 0.05
UPF3A-203ENST00000474056 RFPL4BQ6ZWI9 263 aa15.34■□□□□ 0.05
UPF3A-203ENST00000474056 SYT9Q86SS6 491 aa15.34■□□□□ 0.05
UPF3A-203ENST00000474056 ADCK1Q86TW2 530 aa15.34■□□□□ 0.05
UPF3A-203ENST00000474056 GTF3AQ92664 365 aaKnown RBP15.34■□□□□ 0.05
UPF3A-203ENST00000474056 SOX7Q9BT81 388 aa15.34■□□□□ 0.05
UPF3A-203ENST00000474056 NUAK2Q9H093 628 aa15.34■□□□□ 0.05
UPF3A-203ENST00000474056 COA3Q9Y2R0 106 aaPredicted RBP15.34■□□□□ 0.05
UPF3A-203ENST00000474056 LYVE1Q9Y5Y7 322 aa15.34■□□□□ 0.05
UPF3A-203ENST00000474056 TANC2Q9HCD6 1990 aa15.34■□□□□ 0.05
UPF3A-203ENST00000474056 DOK2O60496 412 aa15.33■□□□□ 0.04
UPF3A-203ENST00000474056 KHDRBS3O75525 346 aaKnown RBP15.33■□□□□ 0.04
UPF3A-203ENST00000474056 MPZL1O95297 269 aa15.33■□□□□ 0.04
UPF3A-203ENST00000474056 TACSTD2P09758 323 aa15.33■□□□□ 0.04
UPF3A-203ENST00000474056 MPV17P39210 176 aa15.33■□□□□ 0.04
UPF3A-203ENST00000474056 MAGEB1P43366 347 aa15.33■□□□□ 0.04
UPF3A-203ENST00000474056 GSSP48637 474 aa15.33■□□□□ 0.04
UPF3A-203ENST00000474056 RFX4Q33E94 735 aa15.33■□□□□ 0.04
UPF3A-203ENST00000474056 MTX3Q5HYI7 312 aa15.33■□□□□ 0.04
UPF3A-203ENST00000474056 C1orf94Q6P1W5 598 aa15.33■□□□□ 0.04
UPF3A-203ENST00000474056 HIPK1Q86Z02 1210 aa15.33■□□□□ 0.04
UPF3A-203ENST00000474056 SLC25A40Q8TBP6 338 aa15.33■□□□□ 0.04
UPF3A-203ENST00000474056 SNX33Q8WV41 574 aa15.33■□□□□ 0.04
UPF3A-203ENST00000474056 IPCEF1Q8WWN9 437 aaPredicted RBP15.33■□□□□ 0.04
UPF3A-203ENST00000474056 YIPF5Q969M3 257 aa15.33■□□□□ 0.04
UPF3A-203ENST00000474056 MSI2Q96DH6 328 aaKnown RBP15.33■□□□□ 0.04
UPF3A-203ENST00000474056 TSSK2Q96PF2 358 aa15.33■□□□□ 0.04
UPF3A-203ENST00000474056 ERMAPQ96PL5 475 aaPredicted RBP15.33■□□□□ 0.04
UPF3A-203ENST00000474056 SLCO1C1Q9NYB5 712 aa15.33■□□□□ 0.04
UPF3A-203ENST00000474056 EIF3KQ9UBQ5 218 aaKnown RBP15.33■□□□□ 0.04
UPF3A-203ENST00000474056 TMCC3Q9ULS5 477 aa15.33■□□□□ 0.04
UPF3A-203ENST00000474056 C17orf100A8MU93 164 aa15.32■□□□□ 0.04
UPF3A-203ENST00000474056 DCTN6O00399 190 aa15.32■□□□□ 0.04
UPF3A-203ENST00000474056 GPANK1O95872 356 aa15.32■□□□□ 0.04
UPF3A-203ENST00000474056 NGFP01138 241 aa15.32■□□□□ 0.04
UPF3A-203ENST00000474056 IGHV3-13P01766 116 aa15.32■□□□□ 0.04
UPF3A-203ENST00000474056 SLC6A6P31641 620 aa15.32■□□□□ 0.04
UPF3A-203ENST00000474056 IL2RGP31785 369 aa15.32■□□□□ 0.04
UPF3A-203ENST00000474056 MAGEA2P43356 314 aa15.32■□□□□ 0.04
UPF3A-203ENST00000474056 MS4A2Q01362 244 aa15.32■□□□□ 0.04
UPF3A-203ENST00000474056 SCRN3Q0VDG4 424 aa15.32■□□□□ 0.04
UPF3A-203ENST00000474056 DBPQ10586 325 aaPredicted RBP15.32■□□□□ 0.04
UPF3A-203ENST00000474056 ZNF718Q3SXZ3 478 aa15.32■□□□□ 0.04
UPF3A-203ENST00000474056 LCN8Q6JVE9 175 aa15.32■□□□□ 0.04
UPF3A-203ENST00000474056 PGBD2Q6P3X8 592 aa15.32■□□□□ 0.04
UPF3A-203ENST00000474056 ARHGAP24Q8N264 748 aa15.32■□□□□ 0.04
UPF3A-203ENST00000474056 OR9Q2Q8NGE9 314 aa15.32■□□□□ 0.04
UPF3A-203ENST00000474056 ABHD4Q8TB40 342 aa15.32■□□□□ 0.04
UPF3A-203ENST00000474056 GNPDA2Q8TDQ7 276 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms