RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 TMEM14AQ9Y6G1 99 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 TRAV8-7A0A075B6U6 113 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 NPIPA2E9PIF3 369 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 NPIPA3F8WFD2 350 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 TM4SF5O14894 197 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 LMX1BO60663 402 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 EIF4EP06730 217 aaKnown RBP5.53□□□□□ -1.52
CLK1-210ENST00000473565 UCHL1P09936 223 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 SLC2A1P11166 492 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 ZNF17P17021 662 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 CD53P19397 219 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 POU3F2P20265 443 aaPredicted RBP5.53□□□□□ -1.52
CLK1-210ENST00000473565 RAB3BP20337 219 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 CASRP41180 1078 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 CCL11P51671 97 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 TRAM1Q15629 374 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 SGCAQ16586 387 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 JMJD6Q6NYC1 403 aaPredicted RBP5.53□□□□□ -1.52
CLK1-210ENST00000473565 DNM1P34Q6PK57 102 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 SAMD12Q8N8I0 201 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 ZIC4Q8N9L1 334 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 OR10H5Q8NGA6 315 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 OR6N1Q8NGY5 312 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 OR6X1Q8NH79 312 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 OR10D3Q8NH80 312 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 RPS4Y2Q8TD47 263 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 CHPT1Q8WUD6 406 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 AP3S1Q92572 193 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 MRPL48Q96GC5 212 aaKnown RBP5.53□□□□□ -1.52
CLK1-210ENST00000473565 TTTY12Q9BZ98 90 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 SRRQ9GZT4 340 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 ZNF703Q9H7S9 590 aaPredicted RBP5.53□□□□□ -1.52
CLK1-210ENST00000473565 SIAEQ9HAT2 523 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 FANCFQ9NPI8 374 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 DLL3Q9NYJ7 618 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 ASH2LQ9UBL3 628 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 LHFPL6Q9Y693 200 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 TNRC6AQ8NDV7 1962 aaKnown RBP5.52□□□□□ -1.53
CLK1-210ENST00000473565 NPIPB13A6NJU9 1138 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 FAM25AB3EWG3 89 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 FAM25CB3EWG5 89 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 FAM25GB3EWG6 89 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 NPIPB4C9JG80 1138 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 RER1O15258 196 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 TMCC2O75069 709 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 FZD7O75084 574 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 IGHV3-9P01782 118 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 MAS1P04201 325 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 ADRA2CP18825 462 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 SRMP19623 302 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 SPINK2P20155 84 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 GALP22466 123 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 LAP3P28838 519 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 ETV6P41212 452 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 CARD18P57730 90 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 PLGLB1Q02325 96 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 PYDC2Q56P42 97 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 RNASE12Q5GAN4 147 aaKnown RBP5.52□□□□□ -1.53
CLK1-210ENST00000473565 TRILQ7L0X0 811 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.52□□□□□ -1.53
CLK1-210ENST00000473565 ADPRHL1Q8NDY3 354 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 TRMT10AQ8TBZ6 339 aaKnown RBP5.52□□□□□ -1.53
CLK1-210ENST00000473565 ABHD3Q8WU67 409 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 TMEM106AQ96A25 262 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 DTNBP1Q96EV8 351 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 FER1L6-AS2Q96M78 137 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 DCBLD2Q96PD2 775 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 FAM173AQ9BQD7 235 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.52□□□□□ -1.53
CLK1-210ENST00000473565 RHBDL2Q9NX52 303 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 BOKQ9UMX3 212 aaPredicted RBP5.52□□□□□ -1.53
CLK1-210ENST00000473565 LIPGQ9Y5X9 500 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 IGF2RP11717 2491 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 A0A1W2PQ09 198 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 GPRIN2O60269 458 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 WISP2O76076 250 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 SERPINA3P01011 423 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 ADRB1P08588 477 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 ZNF12P17014 697 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 CSNK1A1P48729 337 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 MEOX1P50221 254 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 PRKXP51817 358 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 RIDAP52758 137 aaKnown RBP5.52□□□□□ -1.53
CLK1-210ENST00000473565 GFRA1P56159 465 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 CSNK2A1P68400 391 aaPredicted RBP5.52□□□□□ -1.53
CLK1-210ENST00000473565 IL18Q14116 193 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 OXA1LQ15070 435 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 CARTPTQ16568 116 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 YIF1BQ5BJH7 314 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 RNFT1Q5M7Z0 435 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 THEM4Q5T1C6 240 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 FAM205BPQ63HN1 556 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 SLC25A47Q6Q0C1 308 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 UNQ9370/PRO34162Q6UXP9 181 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 KCTD20Q7Z5Y7 419 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 IZUMO1Q8IYV9 350 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 LRRC18Q8N456 261 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 TMEM251Q8N6I4 163 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 IL17RDQ8NFM7 739 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 OR4M1Q8NGD0 313 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms